Soil Properties Drive Microbial Community Structure in a Large Scale Transect in South Eastern Australia.

Abstract:

:Soil microbial communities directly affect soil functionality through their roles in the cycling of soil nutrients and carbon storage. Microbial communities vary substantially in space and time, between soil types and under different land management. The mechanisms that control the spatial distributions of soil microbes are largely unknown as we have not been able to adequately upscale a detailed analysis of the microbiome in a few grams of soil to that of a catchment, region or continent. Here we reveal that soil microbes along a 1000 km transect have unique spatial structures that are governed mainly by soil properties. The soil microbial community assessed using Phospholipid Fatty Acids showed a strong gradient along the latitude gradient across New South Wales, Australia. We found that soil properties contributed the most to the microbial distribution, while other environmental factors (e.g., temperature, elevation) showed lesser impact. Agricultural activities reduced the variation of the microbial communities, however, its influence was local and much less than the overall influence of soil properties. The ability to predict the soil and environmental factors that control microbial distribution will allow us to predict how future soil and environmental change will affect the spatial distribution of microbes.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Xue PP,Carrillo Y,Pino V,Minasny B,McBratney AB

doi

10.1038/s41598-018-30005-8

subject

Has Abstract

pub_date

2018-08-06 00:00:00

pages

11725

issue

1

issn

2045-2322

pii

10.1038/s41598-018-30005-8

journal_volume

8

pub_type

杂志文章
  • Novel Chemically-modified DNAzyme targeting Integrin alpha-4 RNA transcript as a potential molecule to reduce inflammation in multiple sclerosis.

    abstract::Integrin alpha-4 (ITGA4) is a validated therapeutic target for multiple sclerosis (MS) and Natalizumab, an antibody targeting ITGA4 is currently approved for treating MS. However, there are severe side effects related to this therapy. In this study, we report the development of a novel DNAzyme that can efficiently cle...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-01559-w

    authors: Chakravarthy M,Aung-Htut MT,Le BT,Veedu RN

    更新日期:2017-05-09 00:00:00

  • Characterization of a new case of XMLV (Bxv1) contamination in the human cell line Hep2 (clone 2B).

    abstract::The use of misidentified cell lines contaminated by other cell lines and/or microorganisms has generated much confusion in the scientific literature. Detailed characterization of such contaminations is therefore crucial to avoid misinterpretation and ensure robustness and reproducibility of research. Here we use DNA-s...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-73169-y

    authors: Loiseau V,Cordaux R,Giraud I,Beby-Defaux A,Lévêque N,Gilbert C

    更新日期:2020-09-29 00:00:00

  • Erratum: SWIM: a computational tool to unveiling crucial nodes in complex biological networks.

    abstract::This corrects the article DOI: 10.1038/srep44797. ...

    journal_title:Scientific reports

    pub_type: 杂志文章,已发布勘误

    doi:10.1038/srep46843

    authors: Paci P,Colombo T,Fiscon G,Gurtner A,Pavesi G,Farina L

    更新日期:2017-06-16 00:00:00

  • Independently tunable electromagnetically induced transparency effect and dispersion in a multi-band terahertz metamaterial.

    abstract::In this article, we experimentally and numerically investigate a planar terahertz metamaterial (MM) geometry capable of exhibiting independently tunable multi-band electromagnetically induced transparency effect (EIT). The MM structure exhibits multi-band EIT effect due to the strong near field coupling between the br...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-54414-5

    authors: Sarkar R,Ghindani D,Devi KM,Prabhu SS,Ahmad A,Kumar G

    更新日期:2019-12-02 00:00:00

  • Lipid indices as simple and clinically useful surrogate markers for insulin resistance in the U.S. population.

    abstract::This study aimed to compare the accuracy of novel lipid indices, including the visceral adiposity index (VAI), lipid accumulation product (LAP), triglycerides and glucose (TyG) index, TyG-body mass index (TyG-BMI), and TyG-waist circumference (TyG-WC), in identifying insulin resistance and establish valid cutoff value...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-021-82053-2

    authors: Lee J,Kim B,Kim W,Ahn C,Choi HY,Kim JG,Kim J,Shin H,Kang JG,Moon S

    更新日期:2021-01-27 00:00:00

  • A new structure of two-dimensional allotropes of group V elements.

    abstract::The elemental two-dimensional (2D) materials such as graphene, silicene, germanene, and black phosphorus have attracted considerable attention due to their fascinating physical properties. Structurally they possess the honeycomb or distorted honeycomb lattices, which are composed of six-atom rings. Here we find a new ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep25423

    authors: Li P,Luo W

    更新日期:2016-05-06 00:00:00

  • Arx Expression Suppresses Ventralization of the Developing Dorsal Forebrain.

    abstract::Early brain development requires a tight orchestration between neural tube patterning and growth. How pattern formation and brain growth are coordinated is incompletely understood. Previously we showed that aristaless-related homeobox (ARX), a paired-like transcription factor, regulates cortical progenitor pool expans...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-36194-6

    authors: Lim Y,Cho IT,Shi X,Grinspan JB,Cho G,Golden JA

    更新日期:2019-01-18 00:00:00

  • Macromolecularly crowded in vitro microenvironments accelerate the production of extracellular matrix-rich supramolecular assemblies.

    abstract::Therapeutic strategies based on the principles of tissue engineering by self-assembly put forward the notion that functional regeneration can be achieved by utilising the inherent capacity of cells to create highly sophisticated supramolecular assemblies. However, in dilute ex vivo microenvironments, prolonged culture...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep08729

    authors: Kumar P,Satyam A,Fan X,Collin E,Rochev Y,Rodriguez BJ,Gorelov A,Dillon S,Joshi L,Raghunath M,Pandit A,Zeugolis DI

    更新日期:2015-03-04 00:00:00

  • Chronic mercury exposure in Late Neolithic/Chalcolithic populations in Portugal from the cultural use of cinnabar.

    abstract::Cinnabar is a natural mercury sulfide (HgS) mineral of volcanic or hydrothermal origin that is found worldwide. It has been mined prehistorically and historically in China, Japan, Europe, and the Americas to extract metallic mercury (Hg(0)) for use in metallurgy, as a medicinal, a preservative, and as a red pigment fo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep14679

    authors: Emslie SD,Brasso R,Patterson WP,Carlos Valera A,McKenzie A,Maria Silva A,Gleason JD,Blum JD

    更新日期:2015-10-01 00:00:00

  • Corrigendum: Treponema pallidum (syphilis) antigen TpF1 induces angiogenesis through the activation of the IL-8 pathway.

    abstract::This corrects the article DOI: 10.1038/srep18785. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/srep46945

    authors: Pozzobon T,Facchinello N,Bossi F,Capitani N,Benagiano M,Di Benedetto G,Zennaro C,West N,Codolo G,Bernardini M,Baldari CT,D'Elios MM,Pellegrini L,Argenton F,de Bernard M

    更新日期:2018-02-16 00:00:00

  • The robustness of multiplex networks under layer node-based attack.

    abstract::From transportation networks to complex infrastructures, and to social and economic networks, a large variety of systems can be described in terms of multiplex networks formed by a set of nodes interacting through different network layers. Network robustness, as one of the most successful application areas of complex ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep24304

    authors: Zhao DW,Wang LH,Zhi YF,Zhang J,Wang Z

    更新日期:2016-04-14 00:00:00

  • Episodes of horizontal gene-transfer and gene-fusion led to co-existence of different metal-ion specific glyoxalase I.

    abstract::Glyoxalase pathway plays an important role in stress adaptation and many clinical disorders. The first enzyme of this pathway, glyoxalase I (GlxI), uses methylglyoxal as a substrate and requires either Ni(II)/Co(II) or Zn(II) for activity. Here we have investigated the origin of different metal ion specificities of Gl...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep03076

    authors: Kaur C,Vishnoi A,Ariyadasa TU,Bhattacharya A,Singla-Pareek SL,Sopory SK

    更新日期:2013-11-13 00:00:00

  • Tuning methane decomposition on stepped Ni surface: The role of subsurface atoms in catalyst design.

    abstract::The decomposition of methane (CH4) is a catalytically important reaction in the production of syngas that is used to make a wide spectrum of hydrocarbons and alcohols, and a principal carbon deposition pathway in methane reforming. Literatures suggest that stepped Ni surface is uniquely selective toward methane decomp...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-14050-3

    authors: Arevalo RL,Aspera SM,Escaño MCS,Nakanishi H,Kasai H

    更新日期:2017-10-25 00:00:00

  • A clinicohaematological prognostic model for nasal-type natural killer/T-cell lymphoma: A multicenter study.

    abstract::Extranodal NK/T-cell lymphoma, nasal type (NKTL) is an aggressive type of non-Hodgkin lymphoma closely associated with Epstein-Barr virus and characterized by varying degrees of systemic inflammation. We aim to examine the prognostic significance of peripheral blood neutrophil-lymphocyte ratio (NLR) in patients with N...

    journal_title:Scientific reports

    pub_type: 杂志文章,多中心研究

    doi:10.1038/s41598-019-51522-0

    authors: Tan KM,Chia B,Lim JQ,Khoo LP,Cheng CL,Tan L,Poon E,Somasundaram N,Farid M,Tang TPL,Tao M,Cheah DMZ,Laurensia Y,Pang JWL,Song T,Tan J,Huang D,Kim SJ,Kim WS,Ong CK,Lim ST,Chan JY

    更新日期:2019-10-18 00:00:00

  • Chromophore-Assisted Light Inactivation of Mitochondrial Electron Transport Chain Complex II in Caenorhabditis elegans.

    abstract::Mitochondria play critical roles in meeting cellular energy demand, in cell death, and in reactive oxygen species (ROS) and stress signaling. Most Caenorhabditis elegans loss-of-function (lf) mutants in nuclear-encoded components of the respiratory chain are non-viable, emphasizing the importance of respiratory functi...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep29695

    authors: Wojtovich AP,Wei AY,Sherman TA,Foster TH,Nehrke K

    更新日期:2016-07-21 00:00:00

  • Low energy cost for cultured pearl formation in grafted chimeric Pinctada margaritifera.

    abstract::The pearl oyster is one of the rare animal models that support two distinct genomes, through the surgical graft process operated for culture pearl production. This grafted organism is assimilated to a chimera whose physiological functioning remains poorly known. The question of the energy expenditure comparison betwee...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-25360-5

    authors: Le Moullac G,Soyez C,Ky CL

    更新日期:2018-05-14 00:00:00

  • Structure modulated charge transfer in carbon atomic wires.

    abstract::sp-Hybridized carbon atomic wires are appealing systems with large property tunability. In particular, their electronic properties are intimately related to length, structure, and type of functional end-groups as well as to other effects such as the intermolecular charge transfer with metal nanoparticles. Here, by a c...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-38367-9

    authors: Milani A,Barbieri V,Facibeni A,Russo V,Li Bassi A,Lucotti A,Tommasini M,Tzirakis MD,Diederich F,Casari CS

    更新日期:2019-02-07 00:00:00

  • Non-random distribution of homo-repeats: links with biological functions and human diseases.

    abstract::The biological function of multiple repetitions of single amino acids, or homo-repeats, is largely unknown, but their occurrence in proteins has been associated with more than 20 hereditary diseases. Analysing 122 bacterial and eukaryotic genomes, we observed that the number of proteins containing homo-repeats is sign...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep26941

    authors: Lobanov MY,Klus P,Sokolovsky IV,Tartaglia GG,Galzitskaya OV

    更新日期:2016-06-03 00:00:00

  • A novel approach for separating bacteriophages from other bacteriophages using affinity chromatography and phage display.

    abstract::Practical applications of bacteriophages in medicine and biotechnology induce a great need for technologies of phage purification. None of the popular methods offer solutions for separation of a phage from another similar phage. We used affinity chromatography combined with competitive phage display (i) to purify T4 b...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep03220

    authors: Ceglarek I,Piotrowicz A,Lecion D,Miernikiewicz P,Owczarek B,Hodyra K,Harhala M,Górski A,Dąbrowska K

    更新日期:2013-11-14 00:00:00

  • Size-tunable copper nanocluster aggregates and their application in hydrogen sulfide sensing on paper-based devices.

    abstract::Polystyrene sulfonate (PSS), a strong polyelectrolyte, was used to prepare red photoluminescent PSS-penicillamine (PA) copper (Cu) nanoclusters (NC) aggregates, which displayed high selectivity and sensitivity to the detection of hydrogen sulfide (H2S). The size of the PSS-PA-Cu NC aggregates could be readily controll...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep24882

    authors: Chen PC,Li YC,Ma JY,Huang JY,Chen CF,Chang HT

    更新日期:2016-04-26 00:00:00

  • Modeling recovery of natural gas from hydrate reservoirs with carbon dioxide sequestration: Validation with Iġnik Sikumi field data.

    abstract::Fundamental understanding of guest gas replacement in hydrate reservoirs is crucial for the enhanced recovery of natural gas and carbon dioxide (CO2) sequestration. To gain physical insight into this exchange process, this work aims at developing and validating a clathrate hydrate model for gas replacement. Most of th...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-55476-1

    authors: Palodkar AV,Jana AK

    更新日期:2019-12-11 00:00:00

  • Nucleophosmin Interacts with PIN2/TERF1-interacting Telomerase Inhibitor 1 (PinX1) and Attenuates the PinX1 Inhibition on Telomerase Activity.

    abstract::Telomerase activation and telomere maintenance are critical for cellular immortalization and transformation. PIN2/TERF1-interacting telomerase inhibitor 1 (PinX1) is a telomerase regulator and the aberrant expression of PinX1 causes telomere shortening. Identifying PinX1-interacting proteins is important for understan...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep43650

    authors: Cheung DH,Ho ST,Lau KF,Jin R,Wang YN,Kung HF,Huang JJ,Shaw PC

    更新日期:2017-03-03 00:00:00

  • Nucleotide lipid-based hydrogel as a new biomaterial ink for biofabrication.

    abstract::One of the greatest challenges in the field of biofabrication remains the discovery of suitable bioinks that satisfy physicochemical and biological requirements. Despite recent advances in tissue engineering and biofabrication, progress has been limited to the development of technologies using polymer-based materials....

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-59632-w

    authors: Dessane B,Smirani R,Bouguéon G,Kauss T,Ribot E,Devillard R,Barthélémy P,Naveau A,Crauste-Manciet S

    更新日期:2020-02-18 00:00:00

  • Comparative Analysis of Gene Expression Profiles of Human Dental Fluorosis and Kashin-Beck Disease.

    abstract::To explore the pathologies of Kashin-Beck disease (KBD) and KBD accompanied with dental fluorosis (DF), we conducted a comparative analysis of gene expression profiles. 12 subjects were recruited, including 4 KBD patients, 4 patients with KBD and DF and 4 healthy subjects. Genome-wide expression profiles from their pe...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-18519-z

    authors: Zhang Q,Ma J,Liu H,He D,Chen L,Wu H,Jiang H,Lu Q,Bai S

    更新日期:2018-01-09 00:00:00

  • Plastic flow anisotropy drives shear fracture.

    abstract::Fracture of initially crack-free bodies often occurs due to plastic instabilities known as shear bands. Previous computer simulations advanced a myriad of mechanisms to rationalize shear banding. However, they were restricted to planar geometries. We investigate the relevance of anisotropic plasticity by picking an ax...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-38437-y

    authors: Benzerga AA,Thomas N,Herrington JS

    更新日期:2019-02-05 00:00:00

  • The PRC2-binding long non-coding RNAs in human and mouse genomes are associated with predictive sequence features.

    abstract::Recently, long non-coding RNAs (lncRNAs) have emerged as an important class of molecules involved in many cellular processes. One of their primary functions is to shape epigenetic landscape through interactions with chromatin modifying proteins. However, mechanisms contributing to the specificity of such interactions ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep41669

    authors: Tu S,Yuan GC,Shao Z

    更新日期:2017-01-31 00:00:00

  • The 2020 coronavirus lockdown and seismic monitoring of anthropic activities in Northern Italy.

    abstract::In March/April 2020 the Italian government drastically reduced vehicle traffic and interrupted all non-essential industrial activities over the entire national territory. Italy thus became the first country in the world, with the exception of Hubei, to enact lockdown measures as a consequence of the COVID-19 outbreak ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-66368-0

    authors: Poli P,Boaga J,Molinari I,Cascone V,Boschi L

    更新日期:2020-06-10 00:00:00

  • The invasiveness of human cervical cancer associated to the function of NaV1.6 channels is mediated by MMP-2 activity.

    abstract::Voltage-gated sodium (NaV) channels have been related with cell migration and invasiveness in human cancers. We previously reported the contribution of NaV1.6 channels activity with the invasion capacity of cervical cancer (CeCa) positive to Human Papilloma Virus type 16 (HPV16), which accounts for 50% of all CeCa cas...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-31364-y

    authors: Lopez-Charcas O,Espinosa AM,Alfaro A,Herrera-Carrillo Z,Ramirez-Cordero BE,Cortes-Reynosa P,Perez Salazar E,Berumen J,Gomora JC

    更新日期:2018-08-29 00:00:00

  • Reversible hydrophobic to hydrophilic transition in graphene via water splitting induced by UV irradiation.

    abstract::Although the reversible wettability transition between hydrophobic and hydrophilic graphene under ultraviolet (UV) irradiation has been observed, the mechanism for this phenomenon remains unclear. In this work, experimental and theoretical investigations demonstrate that the H2O molecules are split into hydrogen and h...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep06450

    authors: Xu Z,Ao Z,Chu D,Younis A,Li CM,Li S

    更新日期:2014-09-23 00:00:00

  • Formation of CuO nano-flowered surfaces via submerged photo-synthesis of crystallites and their antimicrobial activity.

    abstract::We report the fabrication of flower-like CuO nanostructured surfaces via submerged photo-synthesis of crystallites (SPSC), which requires only UV illumination in neutral water. In this paper, we discuss the reaction mechanism of the photochemical formation of the SPSC-fabricated CuO nanostructures in detail based on s...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-01194-5

    authors: Nishino F,Jeem M,Zhang L,Okamoto K,Okabe S,Watanabe S

    更新日期:2017-04-21 00:00:00