Structural characterization of site-modified nanocapsid with monodispersed gold clusters.

Abstract:

:Hepatitis E Virus-like particles self-assemble in to noninfectious nanocapsids that are resistant to proteolytic/acidic mucosal delivery conditions. Previously, the nanocapsid was engineered to specifically bind and enter breast cancer cells, where successful tumor targeting was demonstrated in animal models. In the present study, the nanocapsid surface was modified with a solvent-exposed cysteine to conjugate monolayer protected gold nanoclusters (AuNC). Unlike commercially available gold nanoparticles, AuNCs monodisperse in water and are composed of a discrete number of gold atoms, forming a crystalline gold core. Au102 pMBA44 (Au102) was an ideal conjugate given its small 2.5 nm size and detectability in cryoEM. Au102 was bound directly to nanocapsid surface cysteines via direct ligand exchange. In addition, Au102 was functionalized with a maleimide linker (Au102_C6MI) for maleimide-thiol conjugation to nanocapsid cysteines. The AuNC-bound nanocapsid constructs were conjugated in various conditions. We found Au102_C6MI to bind nanocapsid more efficiently, while Au102 remained more soluble over time. Nanocapsids conjugated to Au102_C6MI were imaged in cryoEM for single particle reconstruction to localize AuNC position on the nanocapsid surface. We resolved five unique high intensity volumes that formed a ring-shaped density at the 5-fold symmetry center. This finding was further supported by independent rigid modeling.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Stark MC,Baikoghli MA,Lahtinen T,Malola S,Xing L,Nguyen M,Nguyen M,Sikaroudi A,Marjomäki V,Häkkinen H,Cheng RH

doi

10.1038/s41598-017-17171-x

subject

Has Abstract

pub_date

2017-12-06 00:00:00

pages

17048

issue

1

issn

2045-2322

pii

10.1038/s41598-017-17171-x

journal_volume

7

pub_type

杂志文章
  • Virtual screening of anti-HIV1 compounds against SARS-CoV-2: machine learning modeling, chemoinformatics and molecular dynamics simulation based analysis.

    abstract::COVID-19 caused by the SARS-CoV-2 is a current global challenge and urgent discovery of potential drugs to combat this pandemic is a need of the hour. 3-chymotrypsin-like cysteine protease (3CLpro) enzyme is the vital molecular target against the SARS-CoV-2. Therefore, in the present study, 1528 anti-HIV1compounds wer...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-77524-x

    authors: Nand M,Maiti P,Joshi T,Chandra S,Pande V,Kuniyal JC,Ramakrishnan MA

    更新日期:2020-11-23 00:00:00

  • The feasibility and stability of large complex biological networks: a random matrix approach.

    abstract::In the 70's, Robert May demonstrated that complexity creates instability in generic models of ecological networks having random interaction matrices A. Similar random matrix models have since been applied in many disciplines. Central to assessing stability is the "circular law" since it describes the eigenvalue distri...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-26486-2

    authors: Stone L

    更新日期:2018-05-29 00:00:00

  • Comparative transcriptome analysis two genotypes of Acer truncatum Bunge seeds reveals candidate genes that influences seed VLCFAs accumulation.

    abstract::The Acer truncatum Bunge is a particular widespread forest tree species in northern China. VLCFAs are important to eukaryotes survival and play diverse roles throughout the development. So far, there are reports that the Acer truncatum seeds fatty acid (FA) rich in VLCFAs, but little is known about the physiological m...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-33999-3

    authors: Wang R,Liu P,Fan J,Li L

    更新日期:2018-10-19 00:00:00

  • Reduced habit-driven errors in Parkinson's Disease.

    abstract::Parkinson's Disease can be understood as a disorder of motor habits. A prediction of this theory is that early stage Parkinson's patients will display fewer errors caused by interference from previously over-learned behaviours. We test this prediction in the domain of skilled typing, where actions are easy to record a...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-39294-z

    authors: Bannard C,Leriche M,Bandmann O,Brown CH,Ferracane E,Sánchez-Ferro Á,Obeso J,Redgrave P,Stafford T

    更新日期:2019-03-04 00:00:00

  • The aryl hydrocarbon receptor promotes aging phenotypes across species.

    abstract::The ubiquitously expressed aryl hydrocarbon receptor (AhR) induces drug metabolizing enzymes as well as regulators of cell growth, differentiation and apoptosis. Certain AhR ligands promote atherosclerosis, an age-associated vascular disease. Therefore, we investigated the role of AhR in vascular functionality and agi...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep19618

    authors: Eckers A,Jakob S,Heiss C,Haarmann-Stemmann T,Goy C,Brinkmann V,Cortese-Krott MM,Sansone R,Esser C,Ale-Agha N,Altschmied J,Ventura N,Haendeler J

    更新日期:2016-01-21 00:00:00

  • Localization-delocalization transition in spin-orbit-coupled Bose-Einstein condensate.

    abstract::We address the impact of the spin-orbit (SO) coupling on the localization-delocalization-transition (LDT) in a spin-orbit coupled Bose-Einstein condensate in a bichromatic potential. We find that SO coupling significantly alters the threshold depth of the one of sublattices above which the lowest eigenstates transform...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep31700

    authors: Li C,Ye F,Kartashov YV,Konotop VV,Chen X

    更新日期:2016-08-17 00:00:00

  • Photodynamic therapy in oral lichen planus: A prospective case-controlled pilot study.

    abstract::Oral lichen planus (OLP) is a common, chronic relapsing inflammatory disorder of the mucous membranes, which causes major discomfort. Current treatment includes topical/systemic glucocorticoids, immune modulators and systemic immunosuppressants, which may lead to considerable side-effects. The aim of this study was to...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-58548-9

    authors: Cosgarea R,Pollmann R,Sharif J,Schmidt T,Stein R,Bodea A,Auschill T,Sculean A,Eming R,Greene B,Hertl M,Arweiler N

    更新日期:2020-02-03 00:00:00

  • Mutational effects of human dopamine transporter at tyrosine88, lysine92, and histidine547 on basal and HIV-1 Tat-inhibited dopamine transport.

    abstract::Dysregulation of dopaminergic system induced by HIV-1 Tat protein-mediated direct inhibition of the dopamine transporter (DAT) has been implicated as a mediating factor of HIV-1 associated neurocognitive disorders. We have reported that single point mutations on human DAT (hDAT) at tyrosine88 (Y88F), lysine92 (K92M), ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-39872-1

    authors: Sun WL,Quizon PM,Yuan Y,Strauss MJ,McCain R Jr,Zhan CG,Zhu J

    更新日期:2019-03-07 00:00:00

  • A new approach to epitaxially grow high-quality GaN films on Si substrates: the combination of MBE and PLD.

    abstract::High-quality GaN epitaxial films have been grown on Si substrates with Al buffer layer by the combination of molecular beam epitaxy (MBE) and pulsed laser deposition (PLD) technologies. MBE is used to grow Al buffer layer at first, and then PLD is deployed to grow GaN epitaxial films on the Al buffer layer. The surfac...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep24448

    authors: Wang W,Wang H,Yang W,Zhu Y,Li G

    更新日期:2016-04-22 00:00:00

  • Author Correction: Low dose of chlorine exposure exacerbates nasal and pulmonary allergic inflammation in mice.

    abstract::A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has not been fixed in the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-018-36667-8

    authors: de Genaro IS,de Almeida FM,Hizume-Kunzler DC,Moriya HT,Silva RA,Cruz JCG,Lopes RB,Righetti RF,de Paula Vieira R,Saiki M,Martins MA,Tibério IFLC,Arantes-Costa FM,Saraiva-Romanholo BM

    更新日期:2018-12-12 00:00:00

  • Author Correction: Angiotensin-converting enzyme inhibitors or angiotensin receptor blocker monotherapy retard deterioration of renal function in Taiwanese chronic kidney disease population.

    abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-020-63162-w

    authors: Zheng CM,Wang JY,Chen TT,Wu YC,Wu YL,Lin HT,Chiu SP,Chang TJ,Zheng JQ,Chu NF,Lin YM,Su SL,Lu KC,Chen JS,Sung FC,Lee CT,Yang Y,Hwang SJ,Wang MC,Hsu YH,Chiou HY,Kao S,Wu MY,Lin YF

    更新日期:2020-04-15 00:00:00

  • Transdermal neuromodulation of noradrenergic activity suppresses psychophysiological and biochemical stress responses in humans.

    abstract::We engineered a transdermal neuromodulation approach that targets peripheral (cranial and spinal) nerves and utilizes their afferent pathways as signaling conduits to influence brain function. We investigated the effects of this transdermal electrical neurosignaling (TEN) method on sympathetic physiology under differe...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep13865

    authors: Tyler WJ,Boasso AM,Mortimore HM,Silva RS,Charlesworth JD,Marlin MA,Aebersold K,Aven L,Wetmore DZ,Pal SK

    更新日期:2015-09-10 00:00:00

  • Giant proximity effect in single-crystalline MgB2 bilayers.

    abstract::Although giant proximity effect (GPE) can shed important information on understanding superconducting pairing mechanisms and superconducting electronics, reports on the GPE are few because the fabrication of the junctions with GPE is technologically difficult. Here, we report a GPE in the single-crystalline MgB2 bilay...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-40263-9

    authors: Jung SG,Pham D,Park TH,Choi HY,Seo JW,Kang WN,Park T

    更新日期:2019-03-01 00:00:00

  • Chitosan coated cotton cloth supported zero-valent nanoparticles: Simple but economically viable, efficient and easily retrievable catalysts.

    abstract::A simple, economically viable and fast method has been utilized for the preparation of highly active metal nanoparticles (MNPs) in coating layer of chitosan (CH) over cellulose microfibers of cotton cloth (CC). 2 wt% of CH solution was used for the coating of CC strips (CC-CH), and were kept in aqueous solutions of me...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-16815-2

    authors: Ali F,Khan SB,Kamal T,Alamry KA,Asiri AM,Sobahi TRA

    更新日期:2017-12-05 00:00:00

  • Isolation, characterization and identification of antigenotoxic and anticancerous indigenous probiotics and their prophylactic potential in experimental colon carcinogenesis.

    abstract::Colorectal cancer, the third most commonly diagnosed cancer, is a lifestyle disease where diet and gut microbiome contribute intricately in its initiation and progression. Prophylactic bio-interventions mainly probiotics offer an alternate approach towards reducing or delaying its progression. Therefore, the present s...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-51361-z

    authors: Chandel D,Sharma M,Chawla V,Sachdeva N,Shukla G

    更新日期:2019-10-14 00:00:00

  • Publisher Correction: Acoustic allometry revisited: morphological determinants of fundamental frequency in primate vocal production.

    abstract::A correction to this article has been published and is linked from the HTML version of this paper. The error has not been fixed in the paper. ...

    journal_title:Scientific reports

    pub_type: 杂志文章,已发布勘误

    doi:10.1038/s41598-017-18707-x

    authors: Garcia M,Herbst CT,Bowling DL,Dunn JC,Fitch WT

    更新日期:2018-01-15 00:00:00

  • Non-targeted urine metabolomics and associations with prevalent and incident type 2 diabetes.

    abstract::Better risk prediction and new molecular targets are key priorities in type 2 diabetes (T2D) research. Little is known about the role of the urine metabolome in predicting the risk of T2D. We aimed to use non-targeted urine metabolomics to discover biomarkers and improve risk prediction for T2D. Urine samples from two...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-72456-y

    authors: Salihovic S,Broeckling CD,Ganna A,Prenni JE,Sundström J,Berne C,Lind L,Ingelsson E,Fall T,Ärnlöv J,Nowak C

    更新日期:2020-10-05 00:00:00

  • A five-year longitudinal observational study in morbidity and mortality of negative appendectomy in Sulaimani teaching Hospital/Kurdistan Region/Iraq.

    abstract::The most common surgical emergency is suspected acute appendicitis, the lifetime risk of acute appendicitis is estimated to be 8.6% for men and 6.7% for women, with a male to female ratio of 1.4:1; correct diagnosis can be made in 70-80% of patients after the operations about 32% of appendectomies revealed normal appe...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-58847-1

    authors: Ahmed HO,Muhedin R,Boujan A,Aziz AHS,Abdulla AM,Hardi RA,Abdulla AA,Sidiq TA

    更新日期:2020-02-06 00:00:00

  • Carbon black as an alternative cathode material for electrical energy recovery and transfer in a microbial battery.

    abstract::Rather than the conventional concept of viewing conductive carbon black (CB) to be chemically inert in microbial electrochemical cells (MECs), here we confirmed the redox activity of CB for its feasibility as an electron sink in the microbial battery (MB). Acting as the cathode of a MB, the solid-state CB electrode sh...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-07174-z

    authors: Zhang X,Guo K,Shen D,Feng H,Wang M,Zhou Y,Jia Y,Liang Y,Zhou M

    更新日期:2017-08-01 00:00:00

  • Osteoarthritis-like pathologic changes in the knee joint induced by environmental disruption of circadian rhythms is potentiated by a high-fat diet.

    abstract::A variety of environmental factors contribute to progressive development of osteoarthritis (OA). Environmental factors that upset circadian rhythms have been linked to various diseases. Our recent work establishes chronic environmental circadian disruption - analogous to rotating shiftwork-associated disruption of cir...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep16896

    authors: Kc R,Li X,Forsyth CB,Voigt RM,Summa KC,Vitaterna MH,Tryniszewska B,Keshavarzian A,Turek FW,Meng QJ,Im HJ

    更新日期:2015-11-20 00:00:00

  • Transcytosis of TrkA leads to diversification of dendritic signaling endosomes.

    abstract::The development of the peripheral nervous system relies on long-distance signaling from target organs back to the soma. In sympathetic neurons, this long-distance signaling is mediated by target derived Nerve Growth Factor (NGF) interacting with its axonal receptor, TrkA. This ligand receptor complex internalizes into...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-23036-8

    authors: Barford K,Keeler A,McMahon L,McDaniel K,Yap CC,Deppmann CD,Winckler B

    更新日期:2018-03-16 00:00:00

  • Amixicile, a novel strategy for targeting oral anaerobic pathogens.

    abstract::The oral microflora is composed of both health-promoting as well as disease-initiating bacteria. Many of the disease-initiating bacteria are anaerobic and include organisms such as Porphyromonas gingivalis, Prevotella intermedia, Fusobacterium nucleatum, and Tannerella forsythia. Here we investigated a novel therapeut...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-09616-0

    authors: Hutcherson JA,Sinclair KM,Belvin BR,Gui Q,Hoffman PS,Lewis JP

    更新日期:2017-09-05 00:00:00

  • Effects of the Qinghai-Tibet Railway on the Landscape Genetics of the Endangered Przewalski's Gazelle (Procapra przewalskii).

    abstract::The Przewalski's gazelle (Procapra przewalskii) is one of the most endangered ungulates in the world, with fewer than 2,000 individuals surviving in nine habitat fragments on the Qinghai-Tibet Plateau and isolated by human settlements and infrastructure. In particular, the Qinghai-Tibet railway, which crosses the larg...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-18163-7

    authors: Yu H,Song S,Liu J,Li S,Zhang L,Wang D,Luo SJ

    更新日期:2017-12-21 00:00:00

  • Astrocyte-derived adenosine is central to the hypnogenic effect of glucose.

    abstract::Sleep has been hypothesised to maintain a close relationship with metabolism. Here we focus on the brain structure that triggers slow-wave sleep, the ventrolateral preoptic nucleus (VLPO), to explore the cellular and molecular signalling pathways recruited by an increase in glucose concentration. We used infrared vide...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep19107

    authors: Scharbarg E,Daenens M,Lemaître F,Geoffroy H,Guille-Collignon M,Gallopin T,Rancillac A

    更新日期:2016-01-12 00:00:00

  • A unique self-organization of bacterial sub-communities creates iridescence in Cellulophaga lytica colony biofilms.

    abstract::Iridescent color appearances are widespread in nature. They arise from the interaction of light with micron- and submicron-sized physical structures spatially arranged with periodic geometry and are usually associated with bright angle-dependent hues. Iridescence has been reported for many animals and marine organisms...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep19906

    authors: Kientz B,Luke S,Vukusic P,Péteri R,Beaudry C,Renault T,Simon D,Mignot T,Rosenfeld E

    更新日期:2016-01-28 00:00:00

  • The green microalga Tetraselmis suecica reduces oxidative stress and induces repairing mechanisms in human cells.

    abstract::Green microalgae contain many active pigments such as carotenoids having antioxidant and protective activity on human cells. Here we investigate the biological activity of an ethanol/water extract of the marine green microalga Tetraselmis suecica containing high levels of carotenoids such as the xanthophylls lutein, v...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep41215

    authors: Sansone C,Galasso C,Orefice I,Nuzzo G,Luongo E,Cutignano A,Romano G,Brunet C,Fontana A,Esposito F,Ianora A

    更新日期:2017-01-24 00:00:00

  • Polyphyletic origin, intracellular invasion, and meiotic genes in the putatively asexual agamococcidians (Apicomplexa incertae sedis).

    abstract::Agamococcidians are enigmatic and poorly studied parasites of marine invertebrates with unexplored diversity and unclear relationships to other sporozoans such as the human pathogens Plasmodium and Toxoplasma. It is believed that agamococcidians are not capable of sexual reproduction, which is essential for life cycle...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-72287-x

    authors: Miroliubova TS,Simdyanov TG,Mikhailov KV,Aleoshin VV,Janouškovec J,Belova PA,Paskerova GG

    更新日期:2020-09-28 00:00:00

  • X-ray induced dimerization of cinnamic acid: Time-resolved inelastic X-ray scattering study.

    abstract::A classic example of solid-state topochemical reactions is the ultraviolet-light induced photodimerization of α-trans-cinnamic acid (CA). Here, we report the first observation of an X-ray-induced dimerization of CA and monitor it in situ using nonresonant inelastic X-ray scattering spectroscopy (NRIXS). The time-evolu...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep15851

    authors: Inkinen J,Niskanen J,Talka T,Sahle CJ,Müller H,Khriachtchev L,Hashemi J,Akbari A,Hakala M,Huotari S

    更新日期:2015-11-16 00:00:00

  • Comparison between thulium laser resection of prostate and transurethral plasmakinetic resection of prostate or transurethral resection of prostate.

    abstract::Benign prostatic hyperplasia (BPH) is one of the most common diseases in middle-aged and elderly men. In the present study, we aimed to compare the efficacy and safety of thulium laser resection of the prostate (TMLRP) with either transurethral plasmakinetic resection of the prostate (TUPKP) or transurethral resection...

    journal_title:Scientific reports

    pub_type: 杂志文章,meta分析

    doi:10.1038/srep14542

    authors: DeCao H,Wang J,Huang Y,LiangLiu R,JunLei H,Gao L,Tang Z,YingHu C,Li X,JiuYuan H,Dong Q,Wei Q

    更新日期:2015-10-07 00:00:00

  • Azolla pinnata, Aspergillus terreus and Eisenia fetida for enhancing agronomic value of paddy straw.

    abstract::In the present study rice straw (R, control) was mixed with Cowdung (C), Azolla (A) and cellulolytic fungus Aspergillus terreus (F) in different combinations viz. RC, RA, RF, RCF, RCA, RFA and RCFA and subjected to aerobic composting (Acom) and vermicomposting (Vcom - with Eisenia fetida). It was found that addition o...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-37880-1

    authors: Arora M,Kaur A

    更新日期:2019-02-04 00:00:00