Effect of Human Genetic Variability on Gene Expression in Dorsal Root Ganglia and Association with Pain Phenotypes.

Abstract:

:Dorsal root ganglia (DRG) relay sensory information to the brain, giving rise to the perception of pain, disorders of which are prevalent and burdensome. Here, we mapped expression quantitative trait loci (eQTLs) in a collection of human DRGs. DRG eQTLs were enriched within untranslated regions of coding genes of low abundance, with some overlapping with other brain regions and blood cell cis-eQTLs. We confirm functionality of identified eQTLs through their significant enrichment within open chromatin and highly deleterious SNPs, particularly at the exon level, suggesting substantial contribution of eQTLs to alternative splicing regulation. We illustrate pain-related genetic association results explained by DRG eQTLs, with the strongest evidence for contribution of the human leukocyte antigen (HLA) locus, confirmed using a mouse inflammatory pain model. Finally, we show that DRG eQTLs are found among hits in numerous genome-wide association studies, suggesting that this dataset will help address pain components of non-pain disorders.

journal_name

Cell Rep

journal_title

Cell reports

authors

Parisien M,Khoury S,Chabot-Doré AJ,Sotocinal SG,Slade GD,Smith SB,Fillingim RB,Ohrbach R,Greenspan JD,Maixner W,Mogil JS,Belfer I,Diatchenko L

doi

10.1016/j.celrep.2017.05.018

subject

Has Abstract

pub_date

2017-05-30 00:00:00

pages

1940-1952

issue

9

issn

2211-1247

pii

S2211-1247(17)30643-5

journal_volume

19

pub_type

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