Biophysical insight into structure-function relation of Allium sativum Protease Inhibitor by thermal, chemical and pH-induced modulation using comprehensive spectroscopic analysis.

Abstract:

:In this study, we have analyzed the structural and functional changes in the nature of Allium sativum Protease Inhibitor (ASPI) on undergoing various denaturation with variable range of pH, temperature and urea (at pH 8.2). ASPI being anti-tryptic in nature has native molecular mass of ∼15kDa. The conformational stability, functional parameters and their correlation were estimated under different conditions using circular dichroism, fluorescence and activity measurements. ASPI was found to fall in belongs to α+β protein. It demonstrated structural and functional stability in the pH range 5.0-12.0 and up to70°C temperature. Further decrease in pH and increase in temperature induces unfolding followed by aggregation. Chemical induced denaturation was found to be cooperative and transitions were reversible and sigmoid. Tm (midpoint of denaturation), ΔCp (constant pressure heat capacity change) and ΔHm (van't Hoff enthalpy change at Tm were calculated to be 41.25±0.2°C, 1.3±0.07kcalmol-1K-1 and 61±2kcalmol-1 respectively for thermally denatured ASPI earlier. The reversibility of the protein was confirmed for both thermally and chemically denatured ASPI. The results obtained from trypsin inhibitory activity assay and structural studies are found to be in a significant correlation and hence established structure-function relationship of ASPI.

journal_name

Int J Biol Macromol

authors

Shamsi TN,Parveen R,Naz H,Haque MA,Fatima S

doi

10.1016/j.ijbiomac.2017.05.075

subject

Has Abstract

pub_date

2017-10-01 00:00:00

pages

415-423

eissn

0141-8130

issn

1879-0003

pii

S0141-8130(17)30875-9

journal_volume

103

pub_type

杂志文章
  • Recent advances on polysaccharides, lipids and protein based edible films and coatings: A review.

    abstract::Food is a vital product for the survival of human beings and with passage of time quality concerns of consumers are rising. Edible films and coatings are thin layers applied on food products to protect them and improve their quality. Films/coatings are prepared from naturally occurring renewable sources (polysaccharid...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章,评审

    doi:10.1016/j.ijbiomac.2017.11.097

    authors: Hassan B,Chatha SAS,Hussain AI,Zia KM,Akhtar N

    更新日期:2018-04-01 00:00:00

  • Hydroxypropylation of cross-linked sesbania gum, characterization and properties.

    abstract::Sesbania gum (SG) was successfully modified by combining cross-linking with hydroxypropylation in solvent of ethanol. The hydroxypropylation technology parameters were optimized by the orthogonal test. The results indicated that both cross-linking and hydroxypropylation could improve the freeze-thaw stability, acid an...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.10.188

    authors: Tang H,Liu Y,Li Y,Li Q,Liu X

    更新日期:2020-06-01 00:00:00

  • Polymer coated mesoporous ceramic for drug delivery in bone tissue engineering.

    abstract::Treatment strategy for various bone fracture and defects the researchers are focusing to develop a new carrier for delivering the drug into injured area with controlled and sustained manner using biomaterials with dynamic architecture orientation. Ceramic materials are resembled with bone compositional architecture an...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章,评审

    doi:10.1016/j.ijbiomac.2017.11.146

    authors: Subhapradha N,Abudhahir M,Aathira A,Srinivasan N,Moorthi A

    更新日期:2018-04-15 00:00:00

  • Strategies for screening, purification and characterization of bacteriocins.

    abstract::Bacteriocins are bioactive antimicrobial peptides synthesized in the ribosome of numerous bacteria and released extracellularly. Bacteriocins have the ability to kill or inhibit the growth of prokaryotes and could potentially be useful against pathogens and antibiotic-resistant strains of bacteria. The antimicrobial m...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章,评审

    doi:10.1016/j.ijbiomac.2018.05.233

    authors: Zou J,Jiang H,Cheng H,Fang J,Huang G

    更新日期:2018-10-01 00:00:00

  • Biocatalytic strategies in the production of galacto-oligosaccharides and its global status.

    abstract::Galactooligosaccharides (GOSs) are the non-digestible carbohydrates that are composed of 3-10 or longer molecules of galactose and the terminal glucose molecule. These are considered as prebiotics owing to their various health benefits, and therefore is the major focus of research. These are generally synthesized by t...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章,评审

    doi:10.1016/j.ijbiomac.2018.01.062

    authors: Panesar PS,Kaur R,Singh RS,Kennedy JF

    更新日期:2018-05-01 00:00:00

  • Topoisomerase inhibition and albumin interaction studies of acridine-thiosemicarbazone derivatives.

    abstract::In the present study, acridine-thiosemicarbazones (ATD) derivatives were tested for their interaction properties with BSA through UV-Vis absorption and fluorescence spectroscopic studies. Both hyperchromic and hypochromic effects, as well as red or blue shifts were demonstrated after the derivatives were added to the ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.07.097

    authors: da Silva Filho FA,de Freitas Souza T,Ribeiro AG,Alves JEF,de Oliveira JF,de Lima Souza TRC,de Moura RO,do Carmo Alves de Lima M,de Carvalho Junior LB,de Almeida SMV

    更新日期:2019-10-01 00:00:00

  • Helicoverpa-inducible Thioredoxin h from Cicer arietinum: structural modeling and potential targets.

    abstract::Thioredoxins are small and universal proteins, which are involved in the cell redox regulation. In plants, they participate in a broad range of biochemical processes like self-incompatibility, seed germination, pathogen & pest defense and oxidative stress tolerance. The h-type of thioredoxin (Trx-h) protein represents...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2017.12.079

    authors: Singh A,Tyagi C,Nath O,Singh IK

    更新日期:2018-04-01 00:00:00

  • Enhancing chimeric hydrophobin II-vascular endothelial growth factor A165 expression in Pichia pastoris and its efficient purification using hydrophobin counterpart.

    abstract::We report cloning and expressing of recombinant human VEGF-A165, fused at the N-terminal with Hydrophobin II (HFBII) from Trichoderma reseei, in yeast Pichia pastoris. We validated the construct using SDS-PAGE and ELISA against VEGF-A165 and efficiently performed protein purification and enrichment based on HFBII coun...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.08.080

    authors: Arjmand S,Tavasoli Z,Ranaei Siadat SO,Saeidi B,Tavana H

    更新日期:2019-10-15 00:00:00

  • Molecular imprinted chitosan-TiO2 nanocomposite for the selective removal of Rose Bengal from wastewater.

    abstract::A new molecularly imprinted polymer (MIP) chitosan-TiO2 nanocomposite (CTNC) was prepared for the selective and quantitative removal of Rose Bengal dye from industrial wastewater. The physicochemical features of the prepared CTNC-MIP nanoparticles were thoroughly investigated. The prepared MIP nanoparticles exhibited ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2017.09.082

    authors: Ahmed MA,Abdelbar NM,Mohamed AA

    更新日期:2018-02-01 00:00:00

  • New generation of controlled release phosphorus fertilizers based on biological macromolecules: Effect of formulation properties on phosphorus release.

    abstract::The main objective of this work was to study the possibility of using polysaccharides and lignin as a coating material for water-soluble triple superphosphate (TSP) granular fertilizers. In this study, composites based on three polysaccharides (sodium alginate (alginic acid sodium salt): AL, kappa-carrageenan: CR and ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.12.005

    authors: Fertahi S,Bertrand I,Ilsouk M,Oukarroum A,Amjoud M,Zeroual Y,Barakat A

    更新日期:2020-01-15 00:00:00

  • Encapsulation of lipase using magnetic fluorescent calix[4]arene derivatives; improvement of enzyme activity and stability.

    abstract::In this study, iron magnetic nanoparticles capped with fluorescent calixarene derivatives (Fe3O4@Calix-2 and Fe3O4@Calix-3) were prepared in one-step using coprecipitation of Fe(II) and Fe(III) in basic solution. Different techniques were used to characterize the synthesized magnetic nanoparticles, such as Fourier Tra...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.04.182

    authors: Ozyilmaz E,Cetinguney S,Yilmaz M

    更新日期:2019-07-15 00:00:00

  • Extraction and crosslinking of bromelain aggregates for improved stability and reusability from pineapple processing waste.

    abstract::The present study is first of its kind that focuses upon the extraction of bromelain from pineapple core waste and stabilising it as insoluble cross-linked aggregates. The influence of process variables such as the choice of precipitant, type of cross-linker, concentration of cross-linker and the reaction time for cro...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2020.04.220

    authors: Banerjee S,Arora A,Vijayaraghavan R,Patti AF

    更新日期:2020-04-28 00:00:00

  • Sandwich panel biocomposite of thermoplastic corn starch and bacterial cellulose.

    abstract::Inadequate disposition and long period for degradation of Petroleum-derived polymers promote damages in the environment, which could be minimized by the use of biodegradable polymers such as starch and cellulose. Films of thermoplastic corn starch (TPS) and bacterial cellulose (BC) were used to produce sandwich panel ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2020.11.156

    authors: Santos TA,Spinacé MAS

    更新日期:2021-01-15 00:00:00

  • Relationship between the initial rate of protein aggregation and the lag period for amorphous aggregation.

    abstract::Lag period is an inherent characteristic of the kinetic curves registered for protein aggregation. The appearance of a lag period is connected with the nucleation stage and the stages of the formation of folding or unfolding intermediates prone to aggregation (for example, the stage of protein unfolding under stress c...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2014.04.046

    authors: Borzova VA,Markossian KA,Kurganov BI

    更新日期:2014-07-01 00:00:00

  • Light scattering study of heat-denatured globular protein aggregates.

    abstract::The structure of aggregates formed by the globular protein beta-lactoglobulin (beta-lg) after heat induced denaturation was studied using light scattering and size exclusion chromatography. The influence of varying the pH above the iso-electric point (pH 5.2) was investigated in the absence of added salt. Stable aggre...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2008.04.002

    authors: Mehalebi S,Nicolai T,Durand D

    更新日期:2008-08-15 00:00:00

  • Physical properties and structure of aquatic silk fiber from Stenopsyche marmorata.

    abstract::To study the properties and structure of aquatic silk, nest-spinning hydropsychid caddisfly (Stenopsyche marmorata) larva were collected from a Japanese river and the silk glands were removed from the larva by dissecting and dried on the glass plate at room temperature. The silk fibers were obtained by removing fibrou...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2009.10.003

    authors: Tsukada M,Khan MM,Inoue E,Kimura G,Hun JY,Mishima M,Hirabayashi K

    更新日期:2010-01-01 00:00:00

  • The effects of daunomycin antibiotic on histone H(1): thermal denaturation and fluorescence spectroscopy studies.

    abstract::Using thermal denaturation and fluorescence spectroscopy, we have investigated the interaction of antitumor antibiotic, daunomycin, with calf thymus histone H(1) under several ionic strengths. The results show that daunomycin binds to histone H(1) and increases its melting temperature. Increasing ionic strength elevat...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/s0141-8130(00)00146-x

    authors: Zargar SJ,Rabbani A

    更新日期:2000-10-10 00:00:00

  • Polysaccharide and polypeptide based injectable thermo-sensitive hydrogels for local biomedical applications.

    abstract::Injectable thermo-responsive hydrogels have been studied for various biomedical applications including; drug delivery, cell encapsulation, and tissue repairing. There are various natural and synthetic polymers which exhibit homogenous injectable solution at ambient temperature and form a gel in human body temperature....

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章,评审

    doi:10.1016/j.ijbiomac.2019.04.131

    authors: Darge HF,Andrgie AT,Tsai HC,Lai JY

    更新日期:2019-07-15 00:00:00

  • A conformation-based phage-display panning to screen neutralizing anti-VEGF VHHs with VEGFR2 mimicry behavior.

    abstract::The potency of VEGF-based anti-angiogenic strategies in cancer therapy and the brilliant characteristics of VHHs motivated us to directly block VEGF binding to its receptor with neutralizing single domain antibodies, thereby fading away the VEGF signaling pathway. Considering with high resolution crystal structure of ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2015.02.047

    authors: Shahangian SS,H Sajedi R,Hasannia S,Jalili S,Mohammadi M,Taghdir M,Shali A,Mansouri K,Sariri R

    更新日期:2015-01-01 00:00:00

  • Banana fiber Cellulose Nano Crystals grafted with butyl acrylate for heavy metal lead (II) removal.

    abstract::The present work deals with extraction of Cellulose Nano Crystals (CNCs) from Banana fiber using the steam explosion method. Extracted CNCs was grafted with butyl acrylate (BA) monomer with ceric ammonium nitrate (CAN) as an initiator. The prepared graft copolymer was analyzed using FTIR, XRD, SEM and EDAX. FTIR resul...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.03.064

    authors: K R,T G,K V,M S,P N S

    更新日期:2019-06-15 00:00:00

  • The effects of chemical crosslinking manners on the physical properties and biocompatibility of collagen type I/hyaluronic acid composite hydrogels.

    abstract::It is necessary to use chemical crosslinking to regulate the mechanical properties, biodegradability and biocompatibility of hydrogels. In this study, three kinds of collagen type I (Col I)/hyaluronic acid (HA) hydrogels with the same ratio and different chemical crosslinking manners were designed and fabricated, and ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2020.05.208

    authors: Kong W,Gao Y,Liu Q,Dong L,Guo L,Fan H,Fan Y,Zhang X

    更新日期:2020-10-01 00:00:00

  • Factors affecting the association of single- and double-stranded RNAs with montmorillonite nanoclays.

    abstract::Montmorillonite (MMT) nanoclays exist as single and stacked sheet-like structures with large surface areas that can form stable associations with many naturally occurring biomolecules, including nucleic acids. They have been utilized successfully as vehicles for delivery of both drugs and genes into cells. Most previo...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2017.12.124

    authors: Gujjari A,Rodriguez BV,Pescador J,Maeder C,Beall GW,Lewis LK

    更新日期:2018-04-01 00:00:00

  • Electrospraying of environmentally sustainable alginate microbeads for cosmetic additives.

    abstract::Polymer microbeads (MBs) for scrubbing additives have generally been prepared from non-biodegradable synthetic polymers. The worldwide pollution of the marine ecosystem by microplastics urgently demands novel environment-friendly MBs. In this study, Ca-alginate MBs were fabricated by electrospraying an aqueous alginat...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.04.058

    authors: Bae SB,Nam HC,Park WH

    更新日期:2019-07-15 00:00:00

  • Spectroscopic analysis of the interaction of valproic acid with histone H1 in solution and in chromatin structure.

    abstract::Histone H1 is a basic chromosomal protein which links adjacent nucleosomes in chromatin structure. Valproic acid (VPA), a histone deacetylase inhibitor, is widely used as an antiepileptic drug for the treatment of various cancers. In this study the interaction between VPA and histone H1, chromatin and DNA in solution ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2017.02.098

    authors: Sargolzaei J,Rabbani-Chadegani A,Mollaei H,Deezagi A

    更新日期:2017-06-01 00:00:00

  • Molecular docking and in vitro studies of soap nut trypsin inhibitor (SNTI) against phospholipase A2 isoforms in therapeutic intervention of inflammatory diseases.

    abstract::Therapeutic value of allelochemicals in inflammatory disorders and the potential drug targets need to be elucidated to alleviate tissue and vascular injury. Natural anti-inflammatory agents are known to cause minimal adverse effects. Presence of different secondary metabolites (allelochemicals), protease inhibitors li...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2018.03.139

    authors: Sirisha GVD,Vijaya Rachel K,Zaveri K,Yarla NS,Kiranmayi P,Ganash M,Alkreathy HM,Rajeh N,Ashraf GM

    更新日期:2018-07-15 00:00:00

  • Novel pH-sensitive films based on starch/polyvinyl alcohol and food anthocyanins as a visual indicator of shrimp deterioration.

    abstract::Intelligent packaging can provide better preservation and advanced convenience for consumers. In this study, corn starch and polyvinyl alcohol (PVA) were used to produce films. Two easily accessible anthocyanin sources-purple sweet potato extracts (PSPE) and red cabbage extracts (RCE), were added respectively to evalu...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2019.12.159

    authors: Zhang K,Huang TS,Yan H,Hu X,Ren T

    更新日期:2020-02-15 00:00:00

  • Lysozyme-magnesium aluminum silicate microparticles: Molecular interaction, bioactivity and release studies.

    abstract::The objectives of this study were to investigate the adsorption behavior of lysozyme (LSZ) onto magnesium aluminum silicate (MAS) at various pHs and to characterize the LSZ-MAS microparticles obtained from the molecular interaction between LSZ and MAS. The results showed that LSZ could be bound onto the MAS layers at ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2015.07.033

    authors: Kanjanakawinkul W,Medlicott NJ,Rades T,Puttipipatkhachorn S,Pongjanyakul T

    更新日期:2015-09-01 00:00:00

  • Surface chemical functionalization of starch nanocrystals modified by 3-aminopropyl triethoxysilane.

    abstract::A comparative experiment about the 3‑aminopropyl triethoxysilane (APTES) modification of waxy potato starch nanocrystals (WPSNCs) and waxy maize starch nanocrystals (WMSNCs) was employed in the present study. The purpose of surface chemical functionalization was to introduce functional groups and improve hydrophobicit...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2018.12.200

    authors: Hao Y,Chen Y,Xia H,Gao Q

    更新日期:2019-04-01 00:00:00

  • Current advancement on the isolation, characterization and application of lignin.

    abstract::The most critical issues faced by the world nowadays is to provide the sustainability of consumption for energy and natural resources. Lignin is said to be one of the alternative new discoveries best-suited lignocellulosic biomass due to its low cost, sufficient availability and environmentally safe. The valuable prop...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章,评审

    doi:10.1016/j.ijbiomac.2020.06.168

    authors: Liao JJ,Latif NHA,Trache D,Brosse N,Hussin MH

    更新日期:2020-11-01 00:00:00

  • The oxidation of potato starch by Electro-Fenton system in the presence of Fe(II) ions.

    abstract::An efficient method was developed to prepare oxidized potato starch under the pasting point by Electro-Fenton system, in which a complex of sodium citrate and Fe2+ (SC-Fe2+) was used as catalyst, and H2O2 was used as oxidant. In the preparation process the oxidation degree of starch was controlled by the molar ratios ...

    journal_title:International journal of biological macromolecules

    pub_type: 杂志文章

    doi:10.1016/j.ijbiomac.2018.10.012

    authors: Dang X,Chen H,Shan Z,Zhen W,Yang M

    更新日期:2019-01-01 00:00:00