Discovery of nitrate-CPK-NLP signalling in central nutrient-growth networks.

Abstract:

:Nutrient signalling integrates and coordinates gene expression, metabolism and growth. However, its primary molecular mechanisms remain incompletely understood in plants and animals. Here we report unique Ca2+ signalling triggered by nitrate with live imaging of an ultrasensitive biosensor in Arabidopsis leaves and roots. A nitrate-sensitized and targeted functional genomic screen identifies subgroup III Ca2+-sensor protein kinases (CPKs) as master regulators that orchestrate primary nitrate responses. A chemical switch with the engineered mutant CPK10(M141G) circumvents embryo lethality and enables conditional analyses of cpk10 cpk30 cpk32 triple mutants to define comprehensive nitrate-associated regulatory and developmental programs. Nitrate-coupled CPK signalling phosphorylates conserved NIN-LIKE PROTEIN (NLP) transcription factors to specify the reprogramming of gene sets for downstream transcription factors, transporters, nitrogen assimilation, carbon/nitrogen metabolism, redox, signalling, hormones and proliferation. Conditional cpk10 cpk30 cpk32 and nlp7 mutants similarly impair nitrate-stimulated system-wide shoot growth and root establishment. The nutrient-coupled Ca2+ signalling network integrates transcriptome and cellular metabolism with shoot-root coordination and developmental plasticity in shaping organ biomass and architecture.

journal_name

Nature

journal_title

Nature

authors

Liu KH,Niu Y,Konishi M,Wu Y,Du H,Sun Chung H,Li L,Boudsocq M,McCormack M,Maekawa S,Ishida T,Zhang C,Shokat K,Yanagisawa S,Sheen J

doi

10.1038/nature22077

subject

Has Abstract

pub_date

2017-05-18 00:00:00

pages

311-316

issue

7654

eissn

0028-0836

issn

1476-4687

pii

nature22077

journal_volume

545

pub_type

杂志文章

相关文献

NATURE文献大全
  • Inhibition of RNA cleavage but not polyadenylation by a point mutation in mRNA 3' consensus sequence AAUAAA.

    abstract::A single U leads to G transversion in the 3' consensus sequence AAUAAA of the adenovirus early region 1A gene was constructed and the effect of this mutation on processing of the 3' end of the nuclear early region 1A RNAs was analysed. The results demonstrate that the intact AAUAAA is not required for RNA polyadenylat...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/305600a0

    authors: Montell C,Fisher EF,Caruthers MH,Berk AJ

    更新日期:1983-10-13 00:00:00

  • Energetics of running: a new perspective.

    abstract::The amount of energy used to run a mile is nearly the same whether it is run at top speed or at a leisurely pace (although it is used more rapidly at the higher speed). This puzzling independence of energy cost and speed is found generally among running animals, although, on a per gram basis, cost is much higher for s...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/346265a0

    authors: Kram R,Taylor CR

    更新日期:1990-07-19 00:00:00

  • The products of the Drosophila gap genes hunchback and Krüppel bind to the hunchback promoters.

    abstract::The first zygotic genes to be expressed during early Drosophila development are the gap genes. Their role is to read and interpret coarse positional information deposited in the egg by the mother and to refine it by cross-regulatory interactions and by controlling a class of pair-rule genes. Little is known about the ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/341335a0

    authors: Treisman J,Desplan C

    更新日期:1989-09-28 00:00:00

  • Overcoming EGFR(T790M) and EGFR(C797S) resistance with mutant-selective allosteric inhibitors.

    abstract::The epidermal growth factor receptor (EGFR)-directed tyrosine kinase inhibitors (TKIs) gefitinib, erlotinib and afatinib are approved treatments for non-small cell lung cancers harbouring activating mutations in the EGFR kinase, but resistance arises rapidly, most frequently owing to the secondary T790M mutation withi...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature17960

    authors: Jia Y,Yun CH,Park E,Ercan D,Manuia M,Juarez J,Xu C,Rhee K,Chen T,Zhang H,Palakurthi S,Jang J,Lelais G,DiDonato M,Bursulaya B,Michellys PY,Epple R,Marsilje TH,McNeill M,Lu W,Harris J,Bender S,Wong KK,Jänne PA

    更新日期:2016-06-02 00:00:00

  • Meiotic cell cycle requirement for a fly homologue of human Deleted in Azoospermia.

    abstract::Infertility resulting from a severe defect in sperm production affects 2% of men worldwide. Of these men with azoospermia, the absence of sperm in semen, one in eight carry de novo deletions for a specific region of the Y chromosome. A candidate gene for the Y-chromosome azoospermia factor (AZF) has been identified an...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/381783a0

    authors: Eberhart CG,Maines JZ,Wasserman SA

    更新日期:1996-06-27 00:00:00

  • Exploring biology with small organic molecules.

    abstract::Small organic molecules have proven to be invaluable tools for investigating biological systems, but there is still much to learn from their use. To discover and to use more effectively new chemical tools to understand biology, strategies are needed that allow us to systematically explore 'biological-activity space'. ...

    journal_title:Nature

    pub_type: 杂志文章,评审

    doi:10.1038/nature03196

    authors: Stockwell BR

    更新日期:2004-12-16 00:00:00

  • Hypothalamic programming of systemic ageing involving IKK-β, NF-κB and GnRH.

    abstract::Ageing is a result of gradual and overall functional deteriorations across the body; however, it is unknown whether an individual tissue primarily works to mediate the ageing progress and control lifespan. Here we show that the hypothalamus is important for the development of whole-body ageing in mice, and that the un...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature12143

    authors: Zhang G,Li J,Purkayastha S,Tang Y,Zhang H,Yin Y,Li B,Liu G,Cai D

    更新日期:2013-05-09 00:00:00

  • Vaccination against ovine cysticercosis using a defined recombinant antigen.

    abstract::Cysticercosis caused by larval tapeworms is a major public health problem and a cause of substantial economic losses in the farm-animal industries. Taenia ovis in sheep is a particularly important example. Immunity to reinfection with the larvae has a central role in regulating natural transmission of the parasites, a...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/338585a0

    authors: Johnson KS,Harrison GB,Lightowlers MW,O'Hoy KL,Cougle WG,Dempster RP,Lawrence SB,Vinton JG,Heath DD,Rickard MD

    更新日期:1989-04-13 00:00:00

  • Separation of pluripotent haematopoietic stem cells from spleen colony-forming cells.

    abstract::Long-term reconstitution of the lymphohaematopoietic cells of a mouse after lethal irradiation requires the transplantation of at least (5-10) x 10(3) bone marrow cells. Several cell-separation techniques based on cell-surface characteristics have been used in attempts to identify the pluripotent haematopoietic stem c...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/347188a0

    authors: Jones RJ,Wagner JE,Celano P,Zicha MS,Sharkis SJ

    更新日期:1990-09-13 00:00:00

  • An impenetrable barrier to ultrarelativistic electrons in the Van Allen radiation belts.

    abstract::Early observations indicated that the Earth's Van Allen radiation belts could be separated into an inner zone dominated by high-energy protons and an outer zone dominated by high-energy electrons. Subsequent studies showed that electrons of moderate energy (less than about one megaelectronvolt) often populate both zon...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature13956

    authors: Baker DN,Jaynes AN,Hoxie VC,Thorne RM,Foster JC,Li X,Fennell JF,Wygant JR,Kanekal SG,Erickson PJ,Kurth W,Li W,Ma Q,Schiller Q,Blum L,Malaspina DM,Gerrard A,Lanzerotti LJ

    更新日期:2014-11-27 00:00:00

  • Progenitor identification and SARS-CoV-2 infection in human distal lung organoids.

    abstract::The distal lung contains terminal bronchioles and alveoli that facilitate gas exchange. Three-dimensional in vitro human distal lung culture systems would strongly facilitate the investigation of pathologies such as interstitial lung disease, cancer and coronavirus disease 2019 (COVID-19) pneumonia caused by severe ac...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/s41586-020-3014-1

    authors: Salahudeen AA,Choi SS,Rustagi A,Zhu J,van Unen V,de la O SM,Flynn RA,Margalef-Català M,Santos AJM,Ju J,Batish A,Usui T,Zheng GXY,Edwards CE,Wagar LE,Luca V,Anchang B,Nagendran M,Nguyen K,Hart DJ,Terry JM,Belgrad

    更新日期:2020-12-01 00:00:00

  • Direct limits on the interaction of antiprotons with axion-like dark matter.

    abstract::Astrophysical observations indicate that there is roughly five times more dark matter in the Universe than ordinary baryonic matter1, and an even larger amount of the Universe's energy content is attributed to dark energy2. However, the microscopic properties of these dark components remain unknown. Moreover, even ord...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/s41586-019-1727-9

    authors: Smorra C,Stadnik YV,Blessing PE,Bohman M,Borchert MJ,Devlin JA,Erlewein S,Harrington JA,Higuchi T,Mooser A,Schneider G,Wiesinger M,Wursten E,Blaum K,Matsuda Y,Ospelkaus C,Quint W,Walz J,Yamazaki Y,Budker D,Ulmer S

    更新日期:2019-11-01 00:00:00

  • Comparative assessment of large-scale data sets of protein-protein interactions.

    abstract::Comprehensive protein protein interaction maps promise to reveal many aspects of the complex regulatory network underlying cellular function. Recently, large-scale approaches have predicted many new protein interactions in yeast. To measure their accuracy and potential as well as to identify biases, strengths and weak...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature750

    authors: von Mering C,Krause R,Snel B,Cornell M,Oliver SG,Fields S,Bork P

    更新日期:2002-05-23 00:00:00

  • NF-kappaB activation by tumour necrosis factor requires the Akt serine-threonine kinase.

    abstract::Activation of the nuclear transcription factor NF-kappaB by inflammatory cytokines requires the successive action of NF-kappaB-inducing kinase (NIK) and an IKB-kinase (IKK) complex composed of IKKalpha and IKKbeta. Here we show that the Akt serine-threonine kinase is involved in the activation of NF-kappaB by tumour n...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/43466

    authors: Ozes ON,Mayo LD,Gustin JA,Pfeffer SR,Pfeffer LM,Donner DB

    更新日期:1999-09-02 00:00:00

  • The impacts of climate change on water resources and agriculture in China.

    abstract::China is the world's most populous country and a major emitter of greenhouse gases. Consequently, much research has focused on China's influence on climate change but somewhat less has been written about the impact of climate change on China. China experienced explosive economic growth in recent decades, but with only...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature09364

    authors: Piao S,Ciais P,Huang Y,Shen Z,Peng S,Li J,Zhou L,Liu H,Ma Y,Ding Y,Friedlingstein P,Liu C,Tan K,Yu Y,Zhang T,Fang J

    更新日期:2010-09-02 00:00:00

  • Delta-promoted filopodia mediate long-range lateral inhibition in Drosophila.

    abstract::Drosophila thoracic mechanosensory bristles originate from cells that are singled out from 'proneural' groups of competent epithelial cells. Neural competence is restricted to individual sensory organ precursors (SOPs) by Delta/Notch-mediated 'lateral inhibition', whereas other cells in the proneural field adopt an ep...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature02157

    authors: De Joussineau C,Soulé J,Martin M,Anguille C,Montcourrier P,Alexandre D

    更新日期:2003-12-04 00:00:00

  • Reversing histone methylation.

    abstract::Histones package DNA, and post-translational modifications of histones can regulate access to DNA. Until recently, histone methylation-unlike all other histone modifications-was considered a permanent mark. The discovery of enzymes that reverse the methylation of lysines and arginines challenges our current thinking o...

    journal_title:Nature

    pub_type: 杂志文章,评审

    doi:10.1038/nature04048

    authors: Bannister AJ,Kouzarides T

    更新日期:2005-08-25 00:00:00

  • Structural analysis of murine genes containing homoeo box sequences and their expression in embryonal carcinoma cells.

    abstract::The presence of homoeo box sequences in the genomes of vertebrates has suggested that these metazoans possess the equivalent of the homoeotic genes that have a key role in regulating the development of the fruitfly Drosophila melanogaster. We report here that a novel murine homoeo box-containing gene is expressed in e...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/314713a0

    authors: Colberg-Poley AM,Voss SD,Chowdhury K,Gruss P

    更新日期:1985-04-25 00:00:00

  • Agonist-bound structure of the human P2Y12 receptor.

    abstract::The P2Y12 receptor (P2Y12R), one of eight members of the P2YR family expressed in humans, is one of the most prominent clinical drug targets for inhibition of platelet aggregation. Although mutagenesis and modelling studies of the P2Y12R provided useful insights into ligand binding, the agonist and antagonist recognit...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature13288

    authors: Zhang J,Zhang K,Gao ZG,Paoletta S,Zhang D,Han GW,Li T,Ma L,Zhang W,Müller CE,Yang H,Jiang H,Cherezov V,Katritch V,Jacobson KA,Stevens RC,Wu B,Zhao Q

    更新日期:2014-05-01 00:00:00

  • Granular materials: packing grains by thermal cycling.

    abstract::A long-standing problem in managing the behaviour of a collection of solid grains concerns the nature of the grain packing, a property that is typically controlled by how the grains are poured or shaken. Here we show that a systematic and controllable increase in granular packing can be induced by simply raising and t...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/442257a

    authors: Chen K,Cole J,Conger C,Draskovic J,Lohr M,Klein K,Scheidemantel T,Schiffer P

    更新日期:2006-07-20 00:00:00

  • Multiple mechanisms for CRISPR-Cas inhibition by anti-CRISPR proteins.

    abstract::The battle for survival between bacteria and the viruses that infect them (phages) has led to the evolution of many bacterial defence systems and phage-encoded antagonists of these systems. Clustered regularly interspaced short palindromic repeats (CRISPR) and the CRISPR-associated (cas) genes comprise an adaptive imm...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature15254

    authors: Bondy-Denomy J,Garcia B,Strum S,Du M,Rollins MF,Hidalgo-Reyes Y,Wiedenheft B,Maxwell KL,Davidson AR

    更新日期:2015-10-01 00:00:00

  • Salmon-hurling scientists enrich an ecosystem.

    abstract:: ...

    journal_title:Nature

    pub_type: 新闻

    doi:10.1038/d41586-018-07142-1

    authors:

    更新日期:2018-11-01 00:00:00

  • Probing the phagolysosomal environment of human macrophages with a Ca2+-responsive operon fusion in Yersinia pestis.

    abstract::Several microorganisms, including Yersinia sp., Salmonella sp., Brucella sp., Mycobacterium sp. and Leishmania sp., have successfully adapted to grow within macrophage phagolysosomes. Infections caused by these intracellular pathogens are among the most difficult to treat. As part of an antimicrobial strategy directed...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/322834a0

    authors: Pollack C,Straley SC,Klempner MS

    更新日期:1986-08-28 00:00:00

  • Complex hybrid origin of genetic caste determination in harvester ants.

    abstract::Caste differentiation and division of labour are the hallmarks of insect societies and at the root of their ecological success. Kin selection predicts that caste determination should result from environmentally induced differences in gene expression, a prediction largely supported by empirical data. However, two excep...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature01744

    authors: Helms Cahan S,Keller L

    更新日期:2003-07-17 00:00:00

  • Structure of the inner kinetochore CCAN complex assembled onto a centromeric nucleosome.

    abstract::In eukaryotes, accurate chromosome segregation in mitosis and meiosis maintains genome stability and prevents aneuploidy. Kinetochores are large protein complexes that, by assembling onto specialized Cenp-A nucleosomes1,2, function to connect centromeric chromatin to microtubules of the mitotic spindle3,4. Whereas the...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/s41586-019-1609-1

    authors: Yan K,Yang J,Zhang Z,McLaughlin SH,Chang L,Fasci D,Ehrenhofer-Murray AE,Heck AJR,Barford D

    更新日期:2019-10-01 00:00:00

  • Impaired cell fate through gain-of-function mutations in a chromatin reader.

    abstract::Modifications of histone proteins have essential roles in normal development and human disease. Recognition of modified histones by 'reader' proteins is a key mechanism that mediates the function of histone modifications, but how the dysregulation of these readers might contribute to disease remains poorly understood....

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/s41586-019-1842-7

    authors: Wan L,Chong S,Xuan F,Liang A,Cui X,Gates L,Carroll TS,Li Y,Feng L,Chen G,Wang SP,Ortiz MV,Daley SK,Wang X,Xuan H,Kentsis A,Muir TW,Roeder RG,Li H,Li W,Tjian R,Wen H,Allis CD

    更新日期:2020-01-01 00:00:00

  • An alternative approach to establishing trade-offs among greenhouse gases.

    abstract::The Kyoto Protocol permits countries to meet part of their emission reduction obligations by cutting back on gases other than CO2 (ref. 1). This approach requires a definition of trade-offs among the radiatively active gases. The Intergovernmental Panel on Climate Change has suggested global warming potentials for thi...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/35070541

    authors: Manne AS,Richels RG

    更新日期:2001-04-05 00:00:00

  • Guanine nucleotide-binding and autophosphorylating activities associated with the p21src protein of Harvey murine sarcoma virus.

    abstract::The purified p21src protein of Harvey sarcoma virus shows a guanine nucleotide-binding activity and, in addition, at elevated temperature an autophosphorylating activity at a threonine residue using as phosphoryl donor GTP or dGTP but not ATP or dATP. These biochemical activities are unique among those associated with...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/287686a0

    authors: Shih TY,Papageorge AG,Stokes PE,Weeks MO,Scolnick EM

    更新日期:1980-10-23 00:00:00

  • Ultrafast terahertz probes of transient conducting and insulating phases in an electron-hole gas.

    abstract::Many-body systems in nature exhibit complexity and self-organization arising from seemingly simple laws. For example, the long-range Coulomb interaction between electrical charges has a simple form, yet is responsible for a plethora of bound states in matter, ranging from the hydrogen atom to complex biochemical struc...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature01676

    authors: Kaindl RA,Carnahan MA,Hägele D,Lövenich R,Chemla DS

    更新日期:2003-06-12 00:00:00

  • Construction, expression and recognition of an H-2 molecule lacking its carboxyl terminus.

    abstract::A mouse major histocompatibility antigen (H-2) gene, encoding a novel H-2Ld molecule lacking its intracytoplasmic domain, has been constructed and introduced into mouse L-cells. The novel H-2 molecule is found on the surface of the transfected cells at the same level as L-cells transfected with the native H-2Ld gene. ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/307432a0

    authors: Murre C,Reiss CS,Bernabeu C,Chen LB,Burakoff SJ,Seidman JG

    更新日期:1984-02-02 00:00:00