Abstract:
:Associations between soil properties and Pythium groups on soybean roots were investigated in 83 commercial soybean fields in North Dakota. A data set containing 2877 isolates of Pythium which included 26 known spp. and 1 unknown spp. and 13 soil properties from each field were analyzed. A Pearson correlation analysis was performed with all soil properties to observe any significant correlation between properties. Hierarchical clustering, indicator spp., and multi-response permutation procedures were used to identify groups of Pythium. Logistic regression analysis using stepwise selection was employed to calculate probability models for presence of groups based on soil properties. Three major Pythium groups were identified and three soil properties were associated with these groups. Group 1, characterized by P. ultimum, was associated with zinc levels; as zinc increased, the probability of group 1 being present increased (α = 0.05). Pythium group 2, characterized by Pythium kashmirense and an unknown Pythium sp., was associated with cation exchange capacity (CEC) (α < 0.05); as CEC increased, these spp. increased. Group 3, characterized by Pythium heterothallicum and Pythium irregulare, were associated with CEC and calcium carbonate exchange (CCE); as CCE increased and CEC decreased, these spp. increased (α = 0.05). The regression models may have value in predicting pathogenic Pythium spp. in soybean fields in North Dakota and adjacent states.
journal_name
Microb Ecoljournal_title
Microbial ecologyauthors
Zitnick-Anderson KK,Norland JE,Del Río Mendoza LE,Fortuna AM,Nelson BD Jrdoi
10.1007/s00248-017-0958-2subject
Has Abstractpub_date
2017-10-01 00:00:00pages
550-560issue
3eissn
0095-3628issn
1432-184Xpii
10.1007/s00248-017-0958-2journal_volume
74pub_type
杂志文章abstract::Soil microbial communities follow distinct seasonal cycles which result in drastic changes in processes involving soil nutrient availability. The biomass of fungi has been reported to be highest during winter, but is fungal growth really occurring in frozen soil? And what is the effect of plant cover on biomass format...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-011-0001-y
更新日期:2012-07-01 00:00:00
abstract::The predatory activity of bdellovibrios is affected by various environmental pollutants such as detergents, heavy metals, and pesticides. This was shown in a two-membered system ofBdellovibrio andPhotobacterium, in which the effect of the predator on the bioluminescence of the prey indicated the activity of the former...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/BF02032492
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abstract::The growth rate or numerical response of five species of bactivorous ciliates to the abundance ofEnterobacter aerogenes was examined in monoxenic culture. The ciliatesColpidium campylum, C. colpoda, Glaucoma scintillons, G. frontata, andCyclidium glaucoma were isolated from a small pond. Four were grown in shaken cult...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/BF02015077
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abstract::Biotic and abiotic factors can influence interactions between microbial grazers and their prey, thus impacting both the cycling of biogenic carbon within the surface layer of the ocean and the export of carbon to the deep ocean and higher trophic levels. In this study, microcosm experiments were used to evaluate the c...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-002-1058-4
更新日期:2003-03-01 00:00:00
abstract::Our goals were to evaluate the tolerance of mesorhizobia to acid and alkaline conditions as well as to investigate whether acid tolerance is related to the species or the origin site of the isolates. In addition, to investigate the molecular basis of acid tolerance, the expression of chaperone genes groEL and dnaKJ wa...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-012-0098-7
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abstract::Selective isolation, molecular identification and AFLP were used to investigate the distribution of the various species of endophytic and epiphytic Trichoderma associated with banana roots and to compare and contrast their genetic structure. Three specific groups of Trichoderma were observed in the roots of banana. Gr...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-010-9770-y
更新日期:2011-04-01 00:00:00
abstract::Two areas of Chesapeake Bay, Colgate Creek in Baltimore Harbor and Eastern Bay, are presently under study, with routine sampling of water and sediment for petroleum-degrading microorganisms (bacteria, yeasts, and fungi) by direct plating and enrichment culture. Selected physical and chemical parameters are recorded fo...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/BF02512380
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journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/BF00167862
更新日期:1996-03-01 00:00:00
abstract::The bacterial community structure of the rhizosphere and non-rhizosphere soil of Pinus patula, found in the Nilgiris region of Western Ghats, was studied by constructing 16S rRNA gene clone libraries. In the rhizosphere and non-rhizosphere soil clone libraries constructed, 13 and 15 bacterial phyla were identified, re...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-012-0167-y
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abstract::Sediment samples were collected monthly from Acton Lake, a eutrophic reservoir located in an agricultural region of southwestern Ohio, from three stations (River, Middle, and Dam) during the period May 1995 through January 1997. Sedimentary microbial biomass and community structures from these stations were studied us...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s002480000102
更新日期:2001-10-01 00:00:00
abstract::Alterations in microbial community composition, biomass, and function in the Florida Everglades impacted by cultural eutrophication reflect a new physicochemical environment associated with monotypic stands of Typha domingensis. Phospholipid fatty acid (PLFA) biomarkers were used to quantify microbial responses in det...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-012-0090-2
更新日期:2012-11-01 00:00:00
abstract::Little is known of the responsiveness of soil bacterial community structure to disturbance. In this study, we subjected a soil microcosm to physical disturbance, sterilizing 90 % of the soil volume each time, at a range of frequencies. We analysed the bacterial community structure using 454 pyrosequencing of the 16S r...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-013-0237-9
更新日期:2013-07-01 00:00:00
abstract::Aeromonas species were recovered from over 27% of 183 chlorinated drinking water samples collected during an 18-month period. Sixteen of 20 isolates tested elicited a cytotoxic response by Y-1 mouse adrenal cells. None of the strains was either enterotoxigenic by the rabbit ligated ileal loop assay, exhibited piliatio...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/BF02010672
更新日期:1982-12-01 00:00:00
abstract::Endophytes are microbial symbionts living inside plants and have been extensively researched in recent decades for their functions associated with plant responses to environmental stress. We conducted a meta-analysis of endophyte effects on host plants' growth and fitness in response to three abiotic stress factors: d...
journal_title:Microbial ecology
pub_type: 杂志文章,meta分析
doi:10.1007/s00248-017-1054-3
更新日期:2018-02-01 00:00:00
abstract::Fungi play an important role in cycling organic matter and nutrients in marine ecosystems. However, the distribution of fungal communities in the ocean, especially the vertical distribution along depth in the water column, remained poorly understood. Here, we assess the depth-related distribution pattern of fungal com...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-019-01374-y
更新日期:2019-11-01 00:00:00
abstract::The ability of strains of the genusRhodococcus to transform chlorinated phenolic compounds was studied. Noninduced cells of several strains ofRhodococcus, covering at least eight species, were found to attack mono-, di-, and trichlorophenols by hydroxylation at theortho position to chlorocatechols. 3-chlorophenol and ...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/BF02030123
更新日期:1989-09-01 00:00:00
abstract::Owing to their ubiquitous presence and ability to act as primary or opportunistic pathogens, Vibrio species greatly contribute to the diversity and evolution of marine ecosystems. This study was aimed at unveiling the cellular strategies enabling the marine gammaproteobacterium Vibrio harveyi to adapt and persist in n...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-015-0614-7
更新日期:2015-10-01 00:00:00
abstract::A significant number of viable colony-forming bacteria were recovered from deep-ocean bottom water samples passed through a 0.45μm filter. However, these bacteria small enough to pass through a 0.45μm membrane filter and termed "filterable bacteria" were less abundant in open-ocean surface water and coastal water samp...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/BF02010479
更新日期:1981-03-01 00:00:00
abstract::Septate endophytes proliferating in the roots of grasslands' plants shed doubts on the importance of arbuscular mycorrhizal (AM) symbioses in dry soils. The functionality and diversity of the AM symbioses formed in four replicates of three adjacent plant communities (agricultural, native, and restored) in Grasslands N...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-009-9629-2
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abstract::Bulbous rush (Juncus bulbosus) is a pioneer species in acidic, iron-rich, coal mining lakes in the eastern part of Germany. Juncus roots are coated with iron plaques, and it has been suggested that microbial processes under the iron plaques might be supportive for Juncus plant growth. The objectives of this work were ...
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abstract::Arsenic (As) and antimony (Sb) are both toxic metalloids that are of primary concern for human health. Mining activity has introduced elevated levels of arsenic and antimony into the rivers and has increased the risks of drinking water contamination in China. Due to their mobility, the majority of the metalloids origi...
journal_title:Microbial ecology
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abstract::Fine root endophytes (FRE) were traditionally considered a morphotype of arbuscular mycorrhizal fungi (AMF), but recent genetic studies demonstrate that FRE belong within the subphylum Mucoromycotina, rather than in the subphylum Glomeromycotina with the AMF. These findings prompt enquiry into the fundamental ecology ...
journal_title:Microbial ecology
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abstract::Incorporation of [(14)C]leucine into proteins of bacteria was studied in a temperate mesohumic lake. The maximum incorporation of [(14)C] leucine was reached at a concentration of 30 nM determined in dilution cultures. Growth experiments were used to estimate factors for converting leucine incorporation to bacterial c...
journal_title:Microbial ecology
pub_type: 杂志文章
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更新日期:1993-11-01 00:00:00
abstract::The quantitative uptake of latex beads of different sizes and of live cells by 14 species of ciliates was studied. The functional response (uptake rate as function of food particle concentration) can be fitted to a hyperbolic function and this can be explained in terms of the function of the mouth apparatus. Each spec...
journal_title:Microbial ecology
pub_type: 杂志文章
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abstract::The objectives of the research were to investigate short-term dynamics of bacterial populations in soil after a disturbance in the form of fresh organic matter incorporation and to investigate how these dynamics are linked to those of some environmental parameters. To reach these objectives, soil bacterial populations...
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abstract::Mathematical studies for ecosystems involving 2 predators competing for a growing prey population have shown that the 2 competitors can coexist in a state of sustained oscillations for a range of values of the system parameters. For the case of 1 suspension-feeding protozoan population, recent experimental observation...
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abstract::Alcohol production from corn is gaining importance in Ontario, Canada, and elsewhere. A major cost of corn production is the cost of chemical fertilizers and these continue to increase in price. The competitiveness of alcohol with fossil fuels depends on access to low-cost corn that allows growers to earn a sustainabl...
journal_title:Microbial ecology
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doi:10.1007/s00248-006-9039-7
更新日期:2006-04-01 00:00:00
abstract::Abstract New data on 129 bacterial isolates were analyzed together with prior samples to characterize community-level patterns of legume-rhizobial symbiosis on Barro Colorado Island (BCI), Panama. Nodules have been sampled from 24 BCI legume species in 18 genera, representing about one quarter of the legume species an...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-007-9309-z
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