Temporal and spatial instability in neutral and adaptive (MHC) genetic variation in marginal salmon populations.

Abstract:

:The role of marginal populations for the long-term maintenance of species' genetic diversity and evolutionary potential is particularly timely in view of the range shifts caused by climate change. The Centre-Periphery hypothesis predicts that marginal populations should bear reduced genetic diversity and have low evolutionary potential. We analysed temporal stability at neutral microsatellite and adaptive MHC genetic variation over five decades in four marginal Atlantic salmon populations located at the southern limit of the species' distribution with a complicated demographic history, which includes stocking with foreign and native salmon for at least 2 decades. We found a temporal increase in neutral genetic variation, as well as temporal instability in population structuring, highlighting the importance of temporal analyses in studies that examine the genetic diversity of peripheral populations at the margins of the species' range, particularly in face of climate change.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Ciborowski K,Jordan WC,Garcia de Leaniz C,Consuegra S

doi

10.1038/srep42416

subject

Has Abstract

pub_date

2017-02-10 00:00:00

pages

42416

issn

2045-2322

pii

srep42416

journal_volume

7

pub_type

杂志文章
  • Selection of Endogenous Control Reference Genes for Studies on Type 1 or Type 2 Endometrial Cancer.

    abstract::A panel of 32 candidate reference genes was used to identify the most stable genes for gene normalisation in quantitative RT-PCR studies using endometrial biopsies obtained from women with endometrial cancer (type 1 or type 2) and without cancer (controls). RNA from the biopsies was isolated, examined for purity and q...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-64663-4

    authors: Ayakannu T,Taylor AH,Konje JC

    更新日期:2020-05-21 00:00:00

  • Interleukin-10 deficiency impairs regulatory T cell-derived neuropilin-1 functions and promotes Th1 and Th17 immunity.

    abstract::Regulatory T cells (Tregs) expand in peripheral lymphoid organs and can produce immunosuppressive cytokines to support tumor growth. IL-10 abrogation efficiently induces Treg formation but dampens tumoral neuropilin-1 (Nrp-1) Treg signaling, which simultaneously augments Th1 and Th17 immunity. These effects are associ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep24249

    authors: Wang S,Gao X,Shen G,Wang W,Li J,Zhao J,Wei YQ,Edwards CK

    更新日期:2016-04-14 00:00:00

  • Recurrent SARS-CoV-2 RNA positivity after COVID-19: a systematic review and meta-analysis.

    abstract::Present study aimed to estimate the incidence of recurrent SARS-CoV-2 RNA positivity after recovery from COVID-19 and to determine the factors associated with recurrent positivity. We searched the PubMed, MedRxiv, BioRxiv, the Cochrane Library, ClinicalTrials.gov, and the World Health Organization International Clinic...

    journal_title:Scientific reports

    pub_type: 杂志文章,meta分析

    doi:10.1038/s41598-020-77739-y

    authors: Azam M,Sulistiana R,Ratnawati M,Fibriana AI,Bahrudin U,Widyaningrum D,Aljunid SM

    更新日期:2020-11-26 00:00:00

  • Transparent, flexible supercapacitors from nano-engineered carbon films.

    abstract::Here we construct mechanically flexible and optically transparent thin film solid state supercapacitors by assembling nano-engineered carbon electrodes, prepared in porous templates, with morphology of interconnected arrays of complex shapes and porosity. The highly textured graphitic films act as electrode and curren...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep00773

    authors: Jung HY,Karimi MB,Hahm MG,Ajayan PM,Jung YJ

    更新日期:2012-01-01 00:00:00

  • LentiPro26: novel stable cell lines for constitutive lentiviral vector production.

    abstract::Lentiviral vectors (LVs) are excellent tools to promote gene transfer and stable gene expression. Their potential has been already demonstrated in gene therapy clinical trials for the treatment of diverse disorders. For large scale LV production, a stable producer system is desirable since it allows scalable and cost-...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-23593-y

    authors: Tomás HA,Rodrigues AF,Carrondo MJT,Coroadinha AS

    更新日期:2018-03-27 00:00:00

  • Deuterium-labeled Raman tracking of glucose accumulation and protein metabolic dynamics in Aspergillus nidulans hyphal tips.

    abstract::Filamentous fungi grow exclusively at their tips, where many growth-related fungal processes, such as enzyme secretion and invasion into host cells, take place. Hyphal tips are also a site of active metabolism. Understanding metabolic dynamics within the tip region is therefore important for biotechnology and medicine...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-80270-9

    authors: Yasuda M,Takeshita N,Shigeto S

    更新日期:2021-01-14 00:00:00

  • CBX6 is negatively regulated by EZH2 and plays a potential tumor suppressor role in breast cancer.

    abstract::Chromobox 6 (CBX6) is a subunit of Polycomb Repressive Complex 1 (PRC1) that mediates epigenetic gene repression and acts as an oncogene or tumor suppressor in a cancer type-dependent manner. The specific function of CBX6 in breast cancer is currently undefined. In this study, a comprehensive analysis of The Cancer Ge...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-36560-4

    authors: Deng H,Guan X,Gong L,Zeng J,Zhang H,Chen MY,Li G

    更新日期:2019-01-17 00:00:00

  • Dynamic Metasurface Aperture as Smart Around-the-Corner Motion Detector.

    abstract::Detecting and analysing motion is a key feature of Smart Homes and the connected sensor vision they embrace. At present, most motion sensors operate in line-of-sight Doppler shift schemes. Here, we propose an alternative approach suitable for indoor environments, which effectively constitute disordered cavities for ra...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-24681-9

    authors: Del Hougne P,F Imani M,Sleasman T,Gollub JN,Fink M,Lerosey G,Smith DR

    更新日期:2018-04-25 00:00:00

  • The cellular and molecular determinants of emphysematous destruction in COPD.

    abstract::The introduction of microCT has made it possible to show that the terminal bronchioles are narrowed and destroyed before the onset of emphysematous destruction in COPD. This report extends those observations to the cellular and molecular level in the centrilobular phenotype of emphysematous destruction in lungs donate...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-10126-2

    authors: Suzuki M,Sze MA,Campbell JD,Brothers JF 2nd,Lenburg ME,McDonough JE,Elliott WM,Cooper JD,Spira A,Hogg JC

    更新日期:2017-08-25 00:00:00

  • A Pixelated Microwave Near-Field Sensor for Precise Characterization of Dielectric Materials.

    abstract::A highly sensitive microwave near-field sensor based on electrically-small planar resonators is proposed for highly accurate characterization of dielectric materials. The proposed sensor was developed in a robust complete-cycle topology optimization procedure wherein first the sensing area was pixelated. By maximizing...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-49767-w

    authors: Saadat-Safa M,Nayyeri V,Ghadimi A,Soleimani M,Ramahi OM

    更新日期:2019-09-16 00:00:00

  • Transfer and Integration of Breast Milk Stem Cells to the Brain of Suckling Pups.

    abstract::Beside its unique nutritional content breast milk also contains live cells from the mother. Fate of these cells in the offspring has not been adequately described. In this study, we aimed to detect and identify maternal cells in the suckling's blood and the brain. Green fluorescent protein expressing transgenic female...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-32715-5

    authors: Aydın MŞ,Yiğit EN,Vatandaşlar E,Erdoğan E,Öztürk G

    更新日期:2018-09-24 00:00:00

  • Extracellular Cyclic GMP Modulates Membrane Expression of The GluA1 and GluA2 Subunits of AMPA Receptor in Cerebellum: Molecular Mechanisms Involved.

    abstract::There is increasing evidence that extracellular cGMP modulates glutamatergic neurotransmission and some forms of learning. However, the underlying mechanisms remain unknown. We proposed the hypotheses that extracellular cGMP may regulate membrane expression of AMPA receptors. To do this extracellular cGMP should act o...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-18024-3

    authors: Cabrera-Pastor A,Taoro-González L,Cuñat AN,Canet-López D,Balzano T,Felipo V

    更新日期:2017-12-15 00:00:00

  • Polychlorinated biphenyls target Notch/Dll and VEGF R2 in the mouse placenta and human trophoblast cell lines for their anti-angiogenic effects.

    abstract::The intrauterine environment is particularly vulnerable to environmental exposures. We previously established a mouse model that provided evidence for pregnancy complications and placental anti-angiogenesis in response to Aroclor 1254 (A-1254), a mixture of polychlorinated biphenyls (PCBs). Importantly, these effects ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep39885

    authors: Kalkunte S,Huang Z,Lippe E,Kumar S,Robertson LW,Sharma S

    更新日期:2017-01-10 00:00:00

  • Crosstalk between Hedgehog pathway and energy pathways in human adipose-derived stem cells: A deep sequencing analysis of polysome-associated RNA.

    abstract::Adult stem cells are considered promising candidates for cellular therapies due to their capacity to differentiate and self-renew. Differentiation leads to changes in the metabolism, structure, and gene expression patterns of cells. Hedgehog is one of the pathways that is involved in the enhancement of osteogenesis an...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-26533-y

    authors: Shigunov P,Balvedi LT,Santos MDM,Herai RH,de Aguiar AM,Dallagiovanna B

    更新日期:2018-05-30 00:00:00

  • Microbiologically Influenced Corrosion of 2707 Hyper-Duplex Stainless Steel by Marine Pseudomonas aeruginosa Biofilm.

    abstract::Microbiologically Influenced Corrosion (MIC) is a serious problem in many industries because it causes huge economic losses. Due to its excellent resistance to chemical corrosion, 2707 hyper duplex stainless steel (2707 HDSS) has been used in the marine environment. However, its resistance to MIC was not experimentall...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep20190

    authors: Li H,Zhou E,Zhang D,Xu D,Xia J,Yang C,Feng H,Jiang Z,Li X,Gu T,Yang K

    更新日期:2016-02-05 00:00:00

  • On the Relationship between MRI and Local Field Potential Measurements of Spatial and Temporal Variations in Functional Connectivity.

    abstract::Correlations between fluctuations in resting state BOLD fMRI signals are interpreted as measures of functional connectivity (FC), but the neural basis of their origins and their relationships to specific features of underlying electrophysiologic activity, have not been fully established. In particular, the dependence ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-45404-8

    authors: Shi Z,Wilkes DM,Yang PF,Wang F,Wu R,Wu TL,Chen LM,Gore JC

    更新日期:2019-06-20 00:00:00

  • Halotolerant aminopeptidase M29 from Mesorhizobium SEMIA 3007 with biotechnological potential and its impact on biofilm synthesis.

    abstract::The aminopeptidase gene from Mesorhizobium SEMIA3007 was cloned and overexpressed in Escherichia coli. The enzyme called MesoAmp exhibited optimum activity at pH 8.5 and 45 °C and was strongly activated by Co2+ and Mn2+. Under these reaction conditions, the enzyme displayed Km and kcat values of 0.2364 ± 0.018 mM and ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-10932-8

    authors: Sierra EM,Pereira MR,Maester TC,Gomes-Pepe ES,Mendoza ER,Lemos EGM

    更新日期:2017-09-06 00:00:00

  • Neuroprotection by Heat Shock Factor-1 (HSF1) and Trimerization-Deficient Mutant Identifies Novel Alterations in Gene Expression.

    abstract::Heat shock factor-1 (HSF1) protects neurons from death caused by the accumulation of misfolded proteins by stimulating the transcription of genes encoding heat shock proteins (HSPs). This stimulatory action depends on the association of trimeric HSF1 to sequences within HSP gene promoters. However, we recently describ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-35610-1

    authors: Qu Z,Titus ASCLS,Xuan Z,D'Mello SR

    更新日期:2018-11-22 00:00:00

  • Controlled electromechanical cell stimulation on-a-chip.

    abstract::Stem cell research has yielded promising advances in regenerative medicine, but standard assays generally lack the ability to combine different cell stimulations with rapid sample processing and precise fluid control. In this work, we describe the design and fabrication of a micro-scale cell stimulator capable of simu...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep11800

    authors: Pavesi A,Adriani G,Rasponi M,Zervantonakis IK,Fiore GB,Kamm RD

    更新日期:2015-07-02 00:00:00

  • Rigidity of silicone substrates controls cell spreading and stem cell differentiation.

    abstract::The dependences of spreading and differentiation of stem cells plated on hydrogel and silicone gel substrates on the rigidity and porosity of the substrates have recently been a subject of some controversy. In experiments on human mesenchymal stem cells plated on soft, medium rigidity, and hard silicone gels we show t...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep33411

    authors: Vertelov G,Gutierrez E,Lee SA,Ronan E,Groisman A,Tkachenko E

    更新日期:2016-09-21 00:00:00

  • Entanglement, holonomic constraints, and the quantization of fundamental interactions.

    abstract::We provide a proof for the necessity of quantizing fundamental interactions demonstrating that a quantum version is needed for any non trivial conservative interaction whose strength depends on the relative distance between two objects. Our proof is based on a consistency argument that in the presence of a classical f...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-47844-8

    authors: Giampaolo SM,Macrì T

    更新日期:2019-08-06 00:00:00

  • Soil microbial community composition does not predominantly determine the variance of heterotrophic soil respiration across four subtropical forests.

    abstract::To explore the importance of soil microbial community composition on explaining the difference in heterotrophic soil respiration (R(h)) across forests, a field investigation was conducted on Rh and soil physiochemical and microbial properties in four subtropical forests in southern China. We observed that Rh differed ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep07854

    authors: Wei H,Xiao G,Guenet B,Janssens IA,Shen W

    更新日期:2015-01-19 00:00:00

  • Influence of electric current pulses on the solidification of Cu-Bi-Sn immiscible alloys.

    abstract::Continuous solidification experiments were carried out with Cu-Bi-Sn alloys under the effects of Electric Current Pulses (ECPs). A model describing the microstructure evolution was developed. The formation of the microstructure in the continuously solidified alloys was calculated. The calculations demonstrated that EC...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep12680

    authors: Hongxiang J,Jie H,Jiuzhou Z

    更新日期:2015-07-31 00:00:00

  • Multiple genotypes of Echovirus 11 circulated in mainland China between 1994 and 2017.

    abstract::Echovirus 11 (E-11) is one of the most frequently isolated enteroviruses causing meningitis and other diseases such as hand, foot, and mouth disease (HFMD) and acute flaccid paralysis (AFP). Fifty-nine newly determined E-11 VP1 sequences from the China AFP and HFMD surveillance network and 500 E-11 VP1 sequences obtai...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-46870-w

    authors: Li J,Yan D,Chen L,Zhang Y,Song Y,Zhu S,Ji T,Zhou W,Gan F,Wang X,Hong M,Guan L,Shi Y,Wu G,Xu W

    更新日期:2019-07-22 00:00:00

  • Unified theory of surface-plasmonic enhancement and extinction of light transmission through metallic nanoslit arrays.

    abstract::Metallic nanostructures are of immense scientific interest owing to unexpectedly strong interaction with light in deep subwavelength scales. Resonant excitations of surface and cavity plasmonic modes mediate strong light localization in nanoscale objects. Nevertheless, the role of surface plasmon-polaritons (SPP) in l...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep05683

    authors: Yoon JW,Lee JH,Song SH,Magnusson R

    更新日期:2014-07-14 00:00:00

  • Analysis of coupling between magnetic dipoles enhanced by metasurfaces for wireless power transfer efficiency improvement.

    abstract::In this paper, we investigate the possibility of improving efficiency in non-radiative wireless power transfer (WPT) using metasurfaces embedded between two current varying coils and present a complete theoretical analysis of this system. We use a point-dipole approximation to calculate the fields of the coils. Based ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-33174-8

    authors: Younesiraad H,Bemani M

    更新日期:2018-10-05 00:00:00

  • Few-cycle Regime Atomic Force Microscopy.

    abstract::Traditionally, dynamic atomic force microscopy (AFM) techniques are based on the analysis of the quasi-steady state response of the cantilever deflection in terms of Fourier analysis. Here we describe a technique that instead exploits the often disregarded transient response of the cantilever through a relatively mode...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-49104-1

    authors: López-Guerra EA,Somnath S,Solares SD,Jesse S,Ferrini G

    更新日期:2019-09-03 00:00:00

  • Genome-wide characterization and expression analysis suggested diverse functions of the mechanosensitive channel of small conductance-like (MSL) genes in cereal crops.

    abstract::Mechanosensitive ion channels are pore-forming transmembrane proteins that allow ions to move down their electrochemical gradient in response to mechanical stimuli. They participate in many plant developmental processes including the maintenance of plastid shape, pollen tube growth, etc. Herein, a total of 11, 10, 6, ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-73627-7

    authors: Kaur A,Taneja M,Tyagi S,Sharma A,Singh K,Upadhyay SK

    更新日期:2020-10-06 00:00:00

  • Cd(II) Sorption on Montmorillonite-Humic acid-Bacteria Composites.

    abstract::Soil components (e.g., clays, bacteria and humic substances) are known to produce mineral-organic composites in natural systems. Herein, batch sorption isotherms, isothermal titration calorimetry (ITC), and Cd K-edge EXAFS spectroscopy were applied to investigate the binding characteristics of Cd on montmorillonite(Mo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep19499

    authors: Du H,Chen W,Cai P,Rong X,Dai K,Peacock CL,Huang Q

    更新日期:2016-01-21 00:00:00

  • Publisher Correction: Investigating the relationship between Aerosol Optical Depth and Precipitation over Southeast Asia with Relative Humidity as an influencing factor.

    abstract::A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has been fixed in the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-018-25179-0

    authors: Ng DHL,Li R,Raghavan SV,Liong SY

    更新日期:2018-05-10 00:00:00