PARP9 and PARP14 cross-regulate macrophage activation via STAT1 ADP-ribosylation.

Abstract:

:Despite the global impact of macrophage activation in vascular disease, the underlying mechanisms remain obscure. Here we show, with global proteomic analysis of macrophage cell lines treated with either IFNγ or IL-4, that PARP9 and PARP14 regulate macrophage activation. In primary macrophages, PARP9 and PARP14 have opposing roles in macrophage activation. PARP14 silencing induces pro-inflammatory genes and STAT1 phosphorylation in M(IFNγ) cells, whereas it suppresses anti-inflammatory gene expression and STAT6 phosphorylation in M(IL-4) cells. PARP9 silencing suppresses pro-inflammatory genes and STAT1 phosphorylation in M(IFNγ) cells. PARP14 induces ADP-ribosylation of STAT1, which is suppressed by PARP9. Mutations at these ADP-ribosylation sites lead to increased phosphorylation. Network analysis links PARP9-PARP14 with human coronary artery disease. PARP14 deficiency in haematopoietic cells accelerates the development and inflammatory burden of acute and chronic arterial lesions in mice. These findings suggest that PARP9 and PARP14 cross-regulate macrophage activation.

journal_name

Nat Commun

journal_title

Nature communications

authors

Iwata H,Goettsch C,Sharma A,Ricchiuto P,Goh WW,Halu A,Yamada I,Yoshida H,Hara T,Wei M,Inoue N,Fukuda D,Mojcher A,Mattson PC,Barabási AL,Boothby M,Aikawa E,Singh SA,Aikawa M

doi

10.1038/ncomms12849

subject

Has Abstract

pub_date

2016-10-31 00:00:00

pages

12849

issn

2041-1723

pii

ncomms12849

journal_volume

7

pub_type

杂志文章
  • Cryo-EM analysis of the T3S injectisome reveals the structure of the needle and open secretin.

    abstract::The bacterial type III secretion system, or injectisome, is a syringe shaped nanomachine essential for the virulence of many disease causing Gram-negative bacteria. At the core of the injectisome structure is the needle complex, a continuous channel formed by the highly oligomerized inner and outer membrane hollow rin...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-06298-8

    authors: Hu J,Worrall LJ,Hong C,Vuckovic M,Atkinson CE,Caveney N,Yu Z,Strynadka NCJ

    更新日期:2018-09-21 00:00:00

  • A plasma-treated chalcogenide switch device for stackable scalable 3D nanoscale memory.

    abstract::Stackable select devices such as the oxide p-n junction diode and the Schottky diode (one-way switch) have been proposed for non-volatile unipolar resistive switching devices; however, bidirectional select devices (or two-way switch) need to be developed for bipolar resistive switching devices. Here we report on a ful...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms3629

    authors: Lee MJ,Lee D,Cho SH,Hur JH,Lee SM,Seo DH,Kim DS,Yang MS,Lee S,Hwang E,Uddin MR,Kim H,Chung UI,Park Y,Yoo IK

    更新日期:2013-01-01 00:00:00

  • Imaging Coulomb islands in a quantum Hall interferometer.

    abstract::In the quantum Hall regime, near integer filling factors, electrons should only be transmitted through spatially separated edge states. However, in mesoscopic systems, electronic transmission turns out to be more complex, giving rise to a large spectrum of magnetoresistance oscillations. To explain these observations,...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms1038

    authors: Hackens B,Martins F,Faniel S,Dutu CA,Sellier H,Huant S,Pala M,Desplanque L,Wallart X,Bayot V

    更新日期:2010-07-27 00:00:00

  • Ligand regulation of a constitutively dimeric EGF receptor.

    abstract::Ligand-induced receptor dimerization has traditionally been viewed as the key event in transmembrane signalling by epidermal growth factor receptors (EGFRs). Here we show that the Caenorhabditis elegans EGFR orthologue LET-23 is constitutively dimeric, yet responds to its ligand LIN-3 without changing oligomerization ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms8380

    authors: Freed DM,Alvarado D,Lemmon MA

    更新日期:2015-06-10 00:00:00

  • Cep57 is a Mis12-interacting kinetochore protein involved in kinetochore targeting of Mad1-Mad2.

    abstract::The spindle assembly checkpoint (SAC) arrests cells in mitosis by sensing unattached kinetochores, until all chromosomes are bi-oriented by spindle microtubules. Kinetochore accumulation of the SAC component Mad1-Mad2 is crucial for SAC activation. However, the mechanism by which Mad1-Mad2 accumulation at kinetochores...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms10151

    authors: Zhou H,Wang T,Zheng T,Teng J,Chen J

    更新日期:2016-01-08 00:00:00

  • Anharmonic quantum nuclear densities from full dimensional vibrational eigenfunctions with application to protonated glycine.

    abstract::The interpretation of molecular vibrational spectroscopic signals in terms of atomic motion is essential to understand molecular mechanisms and for chemical characterization. The signals are usually assigned after harmonic normal mode analysis, even if molecular vibrations are known to be anharmonic. Here we obtain th...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-18211-3

    authors: Aieta C,Micciarelli M,Bertaina G,Ceotto M

    更新日期:2020-08-28 00:00:00

  • Land-use emissions play a critical role in land-based mitigation for Paris climate targets.

    abstract::Scenarios that limit global warming to below 2 °C by 2100 assume significant land-use change to support large-scale carbon dioxide (CO2) removal from the atmosphere by afforestation/reforestation, avoided deforestation, and Biomass Energy with Carbon Capture and Storage (BECCS). The more ambitious mitigation scenarios...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-05340-z

    authors: Harper AB,Powell T,Cox PM,House J,Huntingford C,Lenton TM,Sitch S,Burke E,Chadburn SE,Collins WJ,Comyn-Platt E,Daioglou V,Doelman JC,Hayman G,Robertson E,van Vuuren D,Wiltshire A,Webber CP,Bastos A,Boysen L,Ciais

    更新日期:2018-08-07 00:00:00

  • Global perturbation of organic carbon cycling by river damming.

    abstract::The damming of rivers represents one of the most far-reaching human modifications of the flows of water and associated matter from land to sea. Dam reservoirs are hotspots of sediment accumulation, primary productivity (P) and carbon mineralization (R) along the river continuum. Here we show that for the period 1970-2...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms15347

    authors: Maavara T,Lauerwald R,Regnier P,Van Cappellen P

    更新日期:2017-05-17 00:00:00

  • Aerodynamic generation of electric fields in turbulence laden with charged inertial particles.

    abstract::Self-induced electricity, including lightning, is often observed in dusty atmospheres. However, the physical mechanisms leading to this phenomenon remain elusive as they are remarkably challenging to determine due to the high complexity of the multi-phase turbulent flows involved. Using a fast multi-pole method in dir...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-03958-7

    authors: Di Renzo M,Urzay J

    更新日期:2018-04-26 00:00:00

  • Carrier multiplication in semiconductor nanocrystals detected by energy transfer to organic dye molecules.

    abstract::Carrier multiplication describes an interesting optical phenomenon in semiconductors whereby more than one electron-hole pair, or exciton, can be simultaneously generated upon absorption of a single high-energy photon. So far, it has been highly debated whether the carrier multiplication efficiency is enhanced in semi...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms2183

    authors: Xiao J,Wang Y,Hua Z,Wang X,Zhang C,Xiao M

    更新日期:2012-01-01 00:00:00

  • Nanoscale geochemical and geomechanical characterization of organic matter in shale.

    abstract::Solid organic matter (OM) plays an essential role in the generation, migration, storage, and production of hydrocarbons from economically important shale rock formations. Electron microscopy images have documented spatial heterogeneity in the porosity of OM at nanoscale, and bulk spectroscopy measurements have documen...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-017-02254-0

    authors: Yang J,Hatcherian J,Hackley PC,Pomerantz AE

    更新日期:2017-12-19 00:00:00

  • NLRP3 lacking the leucine-rich repeat domain can be fully activated via the canonical inflammasome pathway.

    abstract::NLRP3 is a cytosolic sensor triggered by different pathogen- and self-derived signals that plays a central role in a variety of pathological conditions, including sterile inflammation. The leucine-rich repeat domain is present in several innate immune receptors, where it is frequently responsible for sensing danger si...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-07573-4

    authors: Hafner-Bratkovič I,Sušjan P,Lainšček D,Tapia-Abellán A,Cerović K,Kadunc L,Angosto-Bazarra D,Pelegrin P,Jerala R

    更新日期:2018-12-05 00:00:00

  • Beam electrons as a source of Hα flare ribbons.

    abstract::The observations of solar flare onsets show rapid increase of hard and soft X-rays, ultra-violet emission with large Doppler blue shifts associated with plasma upflows, and Hα hydrogen emission with red shifts up to 1-4 Å. Modern radiative hydrodynamic models account well for blue-shifted emission, but struggle to rep...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms15905

    authors: Druett M,Scullion E,Zharkova V,Matthews S,Zharkov S,Rouppe Van der Voort L

    更新日期:2017-06-27 00:00:00

  • Towards fully integrated photonic displacement sensors.

    abstract::The field of optical metrology with its high precision position, rotation and wavefront sensors represents the basis for lithography and high resolution microscopy. However, the on-chip integration-a task highly relevant for future nanotechnological devices-necessitates the reduction of the spatial footprint of sensin...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-16739-y

    authors: Bag A,Neugebauer M,Mick U,Christiansen S,Schulz SA,Banzer P

    更新日期:2020-06-09 00:00:00

  • Systemic short chain fatty acids limit antitumor effect of CTLA-4 blockade in hosts with cancer.

    abstract::Gut microbiota composition influences the clinical benefit of immune checkpoints in patients with advanced cancer but mechanisms underlying this relationship remain unclear. Molecular mechanism whereby gut microbiota influences immune responses is mainly assigned to gut microbial metabolites. Short-chain fatty acids (...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-16079-x

    authors: Coutzac C,Jouniaux JM,Paci A,Schmidt J,Mallardo D,Seck A,Asvatourian V,Cassard L,Saulnier P,Lacroix L,Woerther PL,Vozy A,Naigeon M,Nebot-Bral L,Desbois M,Simeone E,Mateus C,Boselli L,Grivel J,Soularue E,Lepage P,

    更新日期:2020-05-01 00:00:00

  • Macromolecular semi-rigid nanocavities for cooperative recognition of specific large molecular shapes.

    abstract::Molecular shape recognition for larger guest molecules (typically over 1 nm) is a difficult task because it requires cooperativity within a wide three-dimensional nanospace coincidentally probing every molecular aspect (size, outline shape, flexibility and specific groups). Although the intelligent functions of protei...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms3581

    authors: Imaoka T,Kawana Y,Kurokawa T,Yamamoto K

    更新日期:2013-01-01 00:00:00

  • The deubiquitylating enzyme USP15 regulates homologous recombination repair and cancer cell response to PARP inhibitors.

    abstract::Poly-(ADP-ribose) polymerase inhibitors (PARPi) selectively kill breast and ovarian cancers with defects in homologous recombination (HR) caused by BRCA1/2 mutations. There is also clinical evidence for the utility of PARPi in breast and ovarian cancers without BRCA mutations, but the underlying mechanism is not clear...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-09232-8

    authors: Peng Y,Liao Q,Tan W,Peng C,Hu Z,Chen Y,Li Z,Li J,Zhen B,Zhu W,Li X,Yao Y,Song Q,Liu C,Qi X,He F,Pei H

    更新日期:2019-03-15 00:00:00

  • Interactions with conspecific outsiders as drivers of cognitive evolution.

    abstract::The social intelligence hypothesis (SIH) posits that within-group interactions drive cognitive evolution, but it has received equivocal support. We argue the SIH overlooks a major component of social life: interactions with conspecific outsiders. Competition for vital resources means conspecific outsiders present myri...

    journal_title:Nature communications

    pub_type: 杂志文章,评审

    doi:10.1038/s41467-020-18780-3

    authors: Ashton BJ,Kennedy P,Radford AN

    更新日期:2020-10-06 00:00:00

  • Coupled microbial bloom and oxygenation decline recorded by magnetofossils during the Palaeocene-Eocene Thermal Maximum.

    abstract::Understanding marine environmental change and associated biological turnover across the Palaeocene-Eocene Thermal Maximum (PETM; ~56 Ma)-the most pronounced Cenozoic short-term global warming event-is important because of the potential role of the ocean in atmospheric CO2 drawdown, yet proxies for tracing marine produ...

    journal_title:Nature communications

    pub_type: 历史文章,杂志文章

    doi:10.1038/s41467-018-06472-y

    authors: Chang L,Harrison RJ,Zeng F,Berndt TA,Roberts AP,Heslop D,Zhao X

    更新日期:2018-10-01 00:00:00

  • Neural dynamics of the attentional blink revealed by encoding orientation selectivity during rapid visual presentation.

    abstract::The human brain is inherently limited in the information it can make consciously accessible. When people monitor a rapid stream of visual items for two targets, they typically fail to see the second target if it occurs within 200-500 ms of the first, a phenomenon called the attentional blink (AB). The neural basis for...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-14107-z

    authors: Tang MF,Ford L,Arabzadeh E,Enns JT,Visser TAW,Mattingley JB

    更新日期:2020-01-23 00:00:00

  • Enhanced Moran effect by spatial variation in environmental autocorrelation.

    abstract::Spatial correlations in environmental stochasticity can synchronize populations over wide areas, a phenomenon known as the Moran effect. The Moran effect has been confirmed in field, laboratory and theoretical investigations. Little is known, however, about the Moran effect in a common ecological case, when environmen...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms6993

    authors: Massie TM,Weithoff G,Kuckländer N,Gaedke U,Blasius B

    更新日期:2015-01-09 00:00:00

  • A bed nucleus of stria terminalis microcircuit regulating inflammation-associated modulation of feeding.

    abstract::Loss of appetite or anorexia associated with inflammation impairs quality of life and increases morbidity in many diseases. However, the exact neural mechanism that mediates inflammation-associated anorexia is still poorly understood. Here we identified a population of neurons, marked by the expression of protein kina...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-10715-x

    authors: Wang Y,Kim J,Schmit MB,Cho TS,Fang C,Cai H

    更新日期:2019-06-24 00:00:00

  • An epitranscriptomic mechanism underlies selective mRNA translation remodelling in melanoma persister cells.

    abstract::Cancer persister cells tolerate anticancer drugs and serve as the founders of acquired resistance and cancer relapse. Here we show that a subpopulation of BRAFV600 mutant melanoma cells that tolerates exposure to BRAF and MEK inhibitors undergoes a reversible remodelling of mRNA translation that evolves in parallel wi...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-13360-6

    authors: Shen S,Faouzi S,Bastide A,Martineau S,Malka-Mahieu H,Fu Y,Sun X,Mateus C,Routier E,Roy S,Desaubry L,André F,Eggermont A,David A,Scoazec JY,Vagner S,Robert C

    更新日期:2019-12-16 00:00:00

  • 4D Visualization of replication foci in mammalian cells corresponding to individual replicons.

    abstract::Since the pioneering proposal of the replicon model of DNA replication 50 years ago, the predicted replicons have not been identified and quantified at the cellular level. Here, we combine conventional and super-resolution microscopy of replication sites in live and fixed cells with computational image analysis. We co...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms11231

    authors: Chagin VO,Casas-Delucchi CS,Reinhart M,Schermelleh L,Markaki Y,Maiser A,Bolius JJ,Bensimon A,Fillies M,Domaing P,Rozanov YM,Leonhardt H,Cardoso MC

    更新日期:2016-04-07 00:00:00

  • Scanning STED-FCS reveals spatiotemporal heterogeneity of lipid interaction in the plasma membrane of living cells.

    abstract::The interaction of lipids and proteins plays an important role in plasma membrane bioactivity, and much can be learned from their diffusion characteristics. Here we present the combination of super-resolution STED microscopy with scanning fluorescence correlation spectroscopy (scanning STED-FCS, sSTED-FCS) to characte...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms6412

    authors: Honigmann A,Mueller V,Ta H,Schoenle A,Sezgin E,Hell SW,Eggeling C

    更新日期:2014-11-20 00:00:00

  • Presynaptic spinophilin tunes neurexin signalling to control active zone architecture and function.

    abstract::Assembly and maturation of synapses at the Drosophila neuromuscular junction (NMJ) depend on trans-synaptic neurexin/neuroligin signalling, which is promoted by the scaffolding protein Syd-1 binding to neurexin. Here we report that the scaffold protein spinophilin binds to the C-terminal portion of neurexin and is nee...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms9362

    authors: Muhammad K,Reddy-Alla S,Driller JH,Schreiner D,Rey U,Böhme MA,Hollmann C,Ramesh N,Depner H,Lützkendorf J,Matkovic T,Götz T,Bergeron DD,Schmoranzer J,Goettfert F,Holt M,Wahl MC,Hell SW,Scheiffele P,Walter AM,Loll B

    更新日期:2015-10-16 00:00:00

  • Optical soliton molecular complexes in a passively mode-locked fibre laser.

    abstract::Ultrashort optical pulses propagating in a dissipative nonlinear system can interact and bind stably, forming optical soliton molecules. Soliton molecules in ultrafast lasers are under intense research focus and present striking analogies with their matter molecules counterparts. The recent development of real-time sp...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-08755-4

    authors: Wang ZQ,Nithyanandan K,Coillet A,Tchofo-Dinda P,Grelu P

    更新日期:2019-02-19 00:00:00

  • Exploring patterns enriched in a dataset with contrastive principal component analysis.

    abstract::Visualization and exploration of high-dimensional data is a ubiquitous challenge across disciplines. Widely used techniques such as principal component analysis (PCA) aim to identify dominant trends in one dataset. However, in many settings we have datasets collected under different conditions, e.g., a treatment and a...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-04608-8

    authors: Abid A,Zhang MJ,Bagaria VK,Zou J

    更新日期:2018-05-30 00:00:00

  • High photoresponsivity in an all-graphene p-n vertical junction photodetector.

    abstract::Intensive studies have recently been performed on graphene-based photodetectors, but most of them are based on field effect transistor structures containing mechanically exfoliated graphene, not suitable for practical large-scale device applications. Here we report high-efficient photodetector behaviours of chemical v...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms4249

    authors: Kim CO,Kim S,Shin DH,Kang SS,Kim JM,Jang CW,Joo SS,Lee JS,Kim JH,Choi SH,Hwang E

    更新日期:2014-01-01 00:00:00

  • Notch regulates BMP responsiveness and lateral branching in vessel networks via SMAD6.

    abstract::Functional blood vessel growth depends on generation of distinct but coordinated responses from endothelial cells. Bone morphogenetic proteins (BMP), part of the TGFβ superfamily, bind receptors to induce phosphorylation and nuclear translocation of SMAD transcription factors (R-SMAD1/5/8) and regulate vessel growth. ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms13247

    authors: Mouillesseaux KP,Wiley DS,Saunders LM,Wylie LA,Kushner EJ,Chong DC,Citrin KM,Barber AT,Park Y,Kim JD,Samsa LA,Kim J,Liu J,Jin SW,Bautch VL

    更新日期:2016-11-11 00:00:00