Structure-based discovery of potentially active semiochemicals for Cydia pomonella (L.).

Abstract:

:The development of physiologically active semiochemicals is largely limited by the labor-consuming searching process. How to screen active semiochemicals efficiently is of significance to the extension of behavior regulation in pest control. Here pharmacophore modeling and shape-based virtual screening were combined to predict candidate ligands for Cydia pomonella pheromone binding protein 1 (CpomPBP1). Out of the predicted compounds, ETrME displayed the highest affinity to CpomPBP1. Further studies on the interaction between CpomPBP1 and ETrME, not only depicted the binding mode, but also revealed residues providing negative and positive contributions to the ETrME binding. Moreover, key residues involved in interacting with ETrME of CpomPBP1 were determined as well. These findings were significant to providing insights for the future searching and optimization of active semiochemicals.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Liu J,Tian Z,Zhang Y

doi

10.1038/srep34600

subject

Has Abstract

pub_date

2016-10-06 00:00:00

pages

34600

issn

2045-2322

pii

srep34600

journal_volume

6

pub_type

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