Analysis of the complete genome sequence of euphorbia ringspot virus, an atypical member of the genus Potyvirus.

Abstract:

:The complete genome sequence of an isolate of euphorbia ringspot virus (EuRSV) was determined by deep sequencing and rapid amplification of cDNA ends (RACE) RT-PCR. It has an RNA genome of 10,154 nucleotides in size, excluding the poly(A) tail, and encodes a polyprotein of 3265 amino acids. Phylogenetic analysis from this study supports the earlier taxonomic assignment to the genus Potyvirus; however, a gene encoding the HAM1h protein, inserted between NIb and CP of the EuRSV genome, which was previously only observed for cassava brown streak virus and Ugandan cassava brown streak virus of the genus Ipomovirus, is an unusual feature of this potyvirus, which otherwise has typical potyvirus genome features.

journal_name

Arch Virol

journal_title

Archives of virology

authors

Knierim D,Menzel W,Winter S

doi

10.1007/s00705-016-3087-1

subject

Has Abstract

pub_date

2017-01-01 00:00:00

pages

291-293

issue

1

eissn

0304-8608

issn

1432-8798

pii

10.1007/s00705-016-3087-1

journal_volume

162

pub_type

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