Complete genome sequence and architecture of crucian carp Carassius auratus herpesvirus (CaHV).

Abstract:

:Crucian carp Carassius auratus herpesvirus (CaHV) was isolated from diseased crucian carp with acute gill hemorrhages and high mortality. The CaHV genome was sequenced and analyzed. The data showed that it consists of 275,348 bp and contains 150 predicted ORFs. The architecture of the CaHV genome differs from those of four cyprinid herpesviruses (CyHV1, CyHV2, SY-C1, CyHV3), with insertions, deletions and the absence of a terminal direct repeat. Phylogenetic analysis of the DNA polymerase sequences of 17 strains of Herpesvirales members, and the concatenated 12 core ORFs from 10 strains of alloherpesviruses showed that CaHV clustered together with members of the genus Cyprinivirus, family Alloherpesviridae.

journal_name

Arch Virol

journal_title

Archives of virology

authors

Zeng XT,Chen ZY,Deng YS,Gui JF,Zhang QY

doi

10.1007/s00705-016-3037-y

subject

Has Abstract

pub_date

2016-12-01 00:00:00

pages

3577-3581

issue

12

eissn

0304-8608

issn

1432-8798

pii

10.1007/s00705-016-3037-y

journal_volume

161

pub_type

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