The catalase gene family in cucumber: genome-wide identification and organization.

Abstract:

:Catalase (CAT) is a common antioxidant enzyme in almost all living organisms. Currently, detailed reports on cucumber (Cucumis sativus L.) CAT (CsCAT) genes and tissue expression profiling are limited. In the present study, four candidate CsCAT genes were identified in cucumber. Phylogenetic analysis indicated that CsCAT1-CsCAT3 are closely related to Arabidopsis AtCAT1-AtCAT3, but no obvious counterpart was observed for CsCAT4. Intron/exon structure analysis revealed that only one of the 15 positions was completely conserved. Motif analysis showed that, unlike the CAT genes of other species, none of CsCAT genes contained all 10 motifs. Expression data showed that transcripts of all of the CsCAT genes, except CsCAT4, were detected in five tissues. Moreover, their transcription levels displayed differences under different stress treatments.

journal_name

Genet Mol Biol

authors

Hu L,Yang Y,Jiang L,Liu S

doi

10.1590/1678-4685-GMB-2015-0192

subject

Has Abstract

pub_date

2016-07-01 00:00:00

pages

408-15

issue

3

eissn

1415-4757

issn

1678-4685

pii

S1415-47572016005008104

journal_volume

39

pub_type

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