Paenibacillus solani sp. nov., isolated from potato rhizosphere soil.

Abstract:

:A novel Gram-stain-positive, endospore-forming bacterium, designated FJAT-22460T, was isolated from a soil sample of a potato field in Xinjiang Autonomous Region, China. Cells were rods that were catalase-positive and motile by peritrichous flagella. The strain was found to grow at temperatures ranging from 10 to 40 °C (optimum 30 °C) and at pH 5.0-12.0 (optimum pH 7) with 0-5 % (w/v) NaCl (optimum 0 % NaCl). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain FJAT-22460T belonged to the genus Paenibacillus and exhibited 16S rRNA gene sequence similarities of 97.3, 97.2, 97.2 and 97.0 % with Paenibacillus glucanolyticus DSM 5162T, Paenibacillus lautus DSM 3035T, Paenibacillus lactis MB 1871T and Paenibacillus chibensis JCM 9905T, respectively. DNA-DNA relatedness of strain FJAT-22460T with Paenibacillus glucanolyticusDSM 5162T and Paenibacillus lautus DSM 3035T was 62.6 % and 33.3 %, respectively, lower than the 70 % accepted for species delineation. The menaquinone was identified as MK-7. The major fatty acids detected were anteiso-C15 : 0 (51.4 %), iso-C15 : 0 (5.3 %), C16 : 0 (12.1 %), iso-C16 : 0 (10.7 %) and anteiso-C17 : 0 (6.9 %). The DNA G+C content was determined to be 50.9 mol%. Phenotypic, chemotaxonomic and genotypic properties clearly indicated that isolate FJAT-22460T represents a novel species within the genus Paenibacillus, for which the name Paenibacillus solani sp. nov. is proposed. The type strain is FJAT-22460T (=DSM 100999T=CCTCC AB 2015207T).

authors

Liu B,Liu GH,Sengonca C,Schumann P,Lan JL,Chen DJ,Cui WD,Lin NQ

doi

10.1099/ijsem.0.001378

subject

Has Abstract

pub_date

2016-11-01 00:00:00

pages

4486-4491

issue

11

eissn

1466-5026

issn

1466-5034

journal_volume

66

pub_type

杂志文章
  • Proposal of 'Candidatus Frankia alpina', the uncultured symbiont of Alnus alnobetula and A. incana that forms spore-containing nitrogen-fixing root nodules.

    abstract::The members of the genus Frankia are, with a few exceptions, a group of nitrogen-fixing symbiotic actinobacteria that nodulate mostly woody dicotyledonous plants belonging to three orders, eight families and 23 genera of pioneer dicots. These bacteria have been characterized phylogenetically and grouped into four mole...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004433

    authors: Pozzi ACM,Herrera-Belaroussi A,Schwob G,Bautista-Guerrero HH,Bethencourt L,Fournier P,Dubost A,Abrouk D,Normand P,Fernandez MP

    更新日期:2020-10-01 00:00:00

  • Brooklawnia cerclae gen. nov., sp. nov., a propionate-forming bacterium isolated from chlorosolvent-contaminated groundwater.

    abstract::Two novel facultatively anaerobic bacterial strains, BL-34(T) and BL-35, isolated from groundwater contaminated by a mixture of chlorosolvents were characterized using a polyphasic approach. The two strains exhibited essentially identical taxonomic features except for a vitamin B(12) requirement by strain BL-35 for op...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64317-0

    authors: Bae HS,Moe WM,Yan J,Tiago I,da Costa MS,Rainey FA

    更新日期:2006-08-01 00:00:00

  • Construction of an interactive online phytoplasma classification tool, iPhyClassifier, and its application in analysis of the peach X-disease phytoplasma group (16SrIII).

    abstract::Phytoplasmas, the causal agents of numerous plant diseases, are insect-vector-transmitted, cell-wall-less bacteria descended from ancestral low-G+C-content Gram-positive bacteria in the Bacillus-Clostridium group. Despite their monophyletic origin, widely divergent phytoplasma lineages have evolved in adaptation to sp...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.010249-0

    authors: Zhao Y,Wei W,Lee IM,Shao J,Suo X,Davis RE

    更新日期:2009-10-01 00:00:00

  • Solibius ginsengiterrae gen. nov., sp. nov., isolated from soil of a ginseng field, and emended description of the genus Sediminibacterium and of Sediminibacterium salmoneium.

    abstract::A novel Gram-staining-negative bacterial strain, designated DCY13T, was isolated from soil of a ginseng field in Korea and characterized by using a polyphasic approach. The phylogenetic analysis based on 16S rRNA gene sequences revealed that strain DCY13T forms a cluster with members of the genera Sediminibacterium, F...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章,收录出版

    doi:10.1099/ijs.0.011882-0

    authors: Kim YJ,Kim MK,Bui TP,Kim HB,Srinivasan S,Yang DC

    更新日期:2010-12-01 00:00:00

  • Oceanibium sediminis gen. nov., sp. nov., isolated from marine sediment.

    abstract::A novel Gram-stain-negative, rod-shaped marine bacterium, designated as strain O448T, was isolated from the coastal area of Weihai, China (122° 14' E, 36° 54' N). Cells of strain O448T were non-motile, aerobic, approximately 0.4-0.6 µm wide and 1.5-2.0 µm long. Growth occurred at 20-40 °C (optimally between 33-37 °C),...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003139

    authors: Chang YQ,Meng X,Du ZZ,Du ZJ

    更新日期:2019-01-01 00:00:00

  • Thermoanaerobacter subterraneus sp. nov., a novel thermophile isolated from oilfield water.

    abstract::A new thermophilic, anaerobic glucose-fermenting, Gram-positive, rod-shaped bacterium, designated strain SEBR 7858T, was isolated from an oilfield water sample. Under optimal conditions on a glucose-containing medium (3% NaCl, 65 degrees C and pH 7.5), the generation time was 2.5 h. No growth occurred at 35 or 80 degr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-50-6-2141

    authors: Fardeau ML,Magot M,Patel BK,Thomas P,Garcia JL,Ollivier B

    更新日期:2000-11-01 00:00:00

  • Pueribacillus theae gen. nov., sp. nov., isolated from Pu'er tea.

    abstract::A novel bacterial strain, designated T8T, isolated from ripened Pu'er tea, was investigated by using a polyphasic taxonomic approach. Cells stained Gram-positive and were aerobic, sporogenous and rod-shaped with flagella. Phylogenetic analysis of 16S rRNA gene sequences revealed the strain belonged to the family Bacil...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002913

    authors: Wang D,Xiang Y,Jiang C,Zhang J,Hua Z,Niu L,Luo L

    更新日期:2018-09-01 00:00:00

  • Roseovarius mucosus sp. nov., a member of the Roseobacter clade with trace amounts of bacteriochlorophyll a.

    abstract::Among a group of marine isolates that were found to be positive for genes of the bacterial photosynthetic reaction centre, a strain was selected for characterization that was phylogenetically close to the genus Roseovarius. The strain, designated DFL-24T, originated from a culture of Alexandrium ostenfeldii (dinoflage...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63832-0

    authors: Biebl H,Allgaier M,Lünsdorf H,Pukall R,Tindall BJ,Wagner-Döbler I

    更新日期:2005-11-01 00:00:00

  • Streptomyces graminilatus sp. nov., isolated from bamboo litter.

    abstract::A Gram-stain-positive, novel actinobacterium, designated strain JL-6(T), was isolated from the litter of a bamboo (Sasa borealis) forest in Damyang, Korea. Strain JL-6(T) had white-grey, smooth, cylindrical spores that were borne in straight, long spore-chains. The novel strain grew aerobically at 15-28 °C (optimum, 2...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.049528-0

    authors: Lee HJ,Whang KS

    更新日期:2014-02-01 00:00:00

  • Actibacterium ureilyticum sp. nov., isolated from seawater.

    abstract::A polyphasic approach was used to characterize a novel marine bacterial strain, designated LS-811T, isolated from seawater of the South China Sea (Taiwan). Cells of strain LS-811Twere Gram-staining negative, aerobic and rod-shaped with polar flagella. The 16S rRNA gene sequence analysis of strain LS-811T showed highes...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001052

    authors: Lin SY,Young CC,Hameed A,Liu YC,Hsu YH,Chung WC,Young LS

    更新日期:2016-08-01 00:00:00

  • Agromyces terreus sp. nov., isolated from soil.

    abstract::A Gram-positive, non-motile, cream-coloured, curved or straight rod-shaped bacterial strain, DS-10(T), was isolated from soil of Dokdo, Korea, and its taxonomic position was investigated by using a polyphasic approach. Strain DS-10(T) grew optimally at 25 degrees C and pH 7.0-8.0 in the presence of 0.5-1.0 % (w/v) NaC...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65072-0

    authors: Yoon JH,Schumann P,Kang SJ,Park S,Oh TK

    更新日期:2008-06-01 00:00:00

  • Micromonospora sediminis sp. nov., isolated from mangrove sediment.

    abstract::The novel actinomycete, strain CH3-3T, was isolated from mangrove sediment collected from Chonburi Province, Thailand. On the basis of its spore morphology and chemotaxonomic characteristics, the strain belonged to the genus Micromonospora. It contained meso-diaminopimelic acid, glucose, mannose, xylose, ribose and rh...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001175

    authors: Phongsopitanun W,Kudo T,Ohkuma M,Pittayakhajonwut P,Suwanborirux K,Tanasupawat S

    更新日期:2016-08-01 00:00:00

  • Nonlabens halophilus sp. nov., isolated from reclaimed land.

    abstract::A Gram-stain-negative, orange-pigmented, non-spore-forming, non-motile, aerobic, rod-shaped bacterial strain, designated CAU 1131T, was isolated from reclaimed land. Strain CAU 1131T grew optimally at 30 °C and at pH 6.5 in the presence of 4 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences showed t...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001590

    authors: Oh M,Kim JH,Bora N,Kim W

    更新日期:2017-01-01 00:00:00

  • Streptomyces venetus sp. nov., an actinomycete with a blue aerial mycelium.

    abstract::A Gram-positive bacterium, designated CMU-AB225T, was isolated from rhizosphere soil of an oil palm (Elaeis guineensis). The strain exhibited a blue aerial spore mass and a light cream to moderate yellow substrate mycelium and formed chains of spiny spores. Whole-cell hydrolysates consisted of ll-diaminopimelic acid, ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002995

    authors: Sujarit K,Kudo T,Ohkuma M,Pathom-Aree W,Lumyong S

    更新日期:2018-10-01 00:00:00

  • Streptomyces lacrimifluminis sp. nov., a novel actinobacterium that produces antibacterial compounds, isolated from soil.

    abstract::A novel actinobacterial strain, designated Z1027T, was isolated from a soil sample collected near the Tuotuo River, Qinghai-Tibet Plateau (China). The strain exhibited antibacterial activity against Escherichia coli and Staphylococcus aureus. The taxonomic position of strain Z1027T was determined using a polyphasic ap...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001456

    authors: Zhang B,Tang S,Chen X,Zhang L,Zhang G,Zhang W,Liu G,Chen T,Li S,Dyson P

    更新日期:2016-12-01 00:00:00

  • Methylobacterium frigidaeris sp. nov., isolated from an air conditioning system.

    abstract::A reddish pink-pigmented, Gram-stain-negative, aerobic and methylotrophic bacterial strain, designated strain IER25-16T, was isolated from a laboratory air conditioning system in the Republic of Korea. Cells were motile rods showing catalase- and oxidase-positive reactions. Strain IER25-16T grew at 10-40 °C (optimum, ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002500

    authors: Lee Y,Jeon CO

    更新日期:2018-01-01 00:00:00

  • Neisseria dumasiana sp. nov. from human sputum and a dog's mouth.

    abstract::Three independent isolates of Gram-reaction-negative cocci collected from two New York State patients and a dog's mouth in California were subjected to a polyphasic analysis. The 16S rRNA gene sequence similarity among these isolates is 99.66 to 99.86 %. The closest species with a validly published name is Neisseria z...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002148

    authors: Wroblewski D,Cole J,McGinnis J,Perez M,Wilson H,Mingle LA,Musser KA,Wolfgang WJ

    更新日期:2017-11-01 00:00:00

  • Thalassobacillus pellis sp. nov., a moderately halophilic, Gram-positive bacterium isolated from salted hides.

    abstract::A Gram-positive, moderately halophilic and endospore-forming bacterium, designated strain 18OM(T), was isolated from salted animal hides. The cells were rods and produced ellipsoidal endospores at a terminal position. Strain 18OM(T) was motile, strictly aerobic and grew at 0.5-25 % (w/v) NaCl [optimal growth at 10 % (...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.024778-0

    authors: Sánchez-Porro C,Yilmaz P,de la Haba RR,Birbir M,Ventosa A

    更新日期:2011-05-01 00:00:00

  • Castellaniella caeni sp. nov., a denitrifying bacterium isolated from sludge of a leachate treatment plant.

    abstract::A Gram-negative, non-motile, facultatively anaerobic, denitrifying bacterial strain, designated Ho-11(T), was isolated from sludge of a leachate treatment plant and was characterized taxonomically by using a polyphasic approach. The G+C content of the genomic DNA was 63.5 mol%. Strain Ho-11(T) contained ubiquinone Q-8...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65314-0

    authors: Liu QM,Ten LN,Im WT,Lee ST

    更新日期:2008-09-01 00:00:00

  • Herminiimonas glaciei sp. nov., a novel ultramicrobacterium from 3042 m deep Greenland glacial ice.

    abstract::A Gram-negative ultramicrobacterium (designated strain UMB49(T)) was isolated from a 120,000-year-old, 3,042 m deep Greenland glacier ice core using a 0.2 mum filtration enrichment procedure. Phylogenetic analysis of the 16S rRNA gene sequence indicated that this strain belonged to the genus Herminiimonas of the famil...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.001685-0

    authors: Loveland-Curtze J,Miteva VI,Brenchley JE

    更新日期:2009-06-01 00:00:00

  • Erythrobacter lutimaris sp. nov., isolated from a tidal flat sediment.

    abstract::A Gram-stain-negative, non-motile, coccoid- or oval-shaped bacterial strain, designated S-5(T), belonging to the class Alphaproteobacteria, was isolated from a tidal flat sediment of the Yellow Sea, Korea and was subjected to a polyphasic taxonomic study. Strain S-5(T) grew optimally at pH 7.0-8.0, at 30 °C and in the...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.067728-0

    authors: Jung YT,Park S,Lee JS,Yoon JH

    更新日期:2014-12-01 00:00:00

  • Salinibacterium xinjiangense sp. nov., a psychrophilic bacterium isolated from the China No. 1 glacier.

    abstract::A novel psychrophilic, Gram-positive, yellow-pigmented and aerobic bacterium, strain 0543(T), was isolated from the China No. 1 glacier. Strain 0543(T) was able to grow at 4-23 degrees C, with optimum growth at 18-19 degrees C. The major fatty acids were anteiso-C(15 : 0) (58.36 %), iso-C(16 : 0) (21.13 %), iso-C(14 :...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65802-0

    authors: Zhang DC,Liu HC,Xin YH,Yu Y,Zhou PJ,Zhou YG

    更新日期:2008-12-01 00:00:00

  • Pelobacter seleniigenes sp. nov., a selenate-respiring bacterium.

    abstract::Strain KM(T) is a novel bacterium with the unique metabolic abilities of being able to respire selenate as the electron acceptor using acetate as the carbon substrate and possessing the ability to grow fermentatively on short-chain organic acids such as lactate, citrate and pyruvate. Strain KM(T) was isolated from a s...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64980-0

    authors: Narasingarao P,Häggblom MM

    更新日期:2007-09-01 00:00:00

  • Nocardioides fonticola sp. nov., a novel actinomycete isolated from spring water.

    abstract::A Gram-positive, rod-shaped, yellow-pigmented actinomycete, designated strain NAA-13T, was isolated from a freshwater spring located in Kaoshiung, southern Taiwan. This strain was characterized using a polyphasic taxonomic approach. The organism had chemotaxonomic and morphological properties consistent with its class...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65810-0

    authors: Chou JH,Cho NT,Arun AB,Young CC,Chen WM

    更新日期:2008-08-01 00:00:00

  • Thermaerobacter subterraneus sp. nov., a novel aerobic bacterium from the Great Artesian Basin of Australia, and emendation of the genus Thermaerobacter.

    abstract::A strictly aerobic, thermophilic, gram-positive, spore-producing, rod-shaped bacterium (2.0-10.0 x 0.3 microm), designated isolate C21T, was isolated from a sample collected from an open drain run-off channel of a bore in the Great Artesian Basin of Australia (New Lorne Bore, registered number 17263). Isolate C21T gre...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-3-795

    authors: Spanevello MD,Yamamoto H,Patel BKC

    更新日期:2002-05-01 00:00:00

  • Pectobacterium punjabense sp. nov., isolated from blackleg symptoms of potato plants in Pakistan.

    abstract::Pectobacterium isolates SS95T, SS54 and SS56 were collected from a potato field in the Chiniot district in the plains of the Punjab province, Pakistan. Sequencing of the gapA barcode revealed that these strains belong to a novel phylogenetic group separated from P.ectobacterium wasabiae and Pectobacterium parmentieri ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003029

    authors: Sarfraz S,Riaz K,Oulghazi S,Cigna J,Sahi ST,Khan SH,Faure D

    更新日期:2018-11-01 00:00:00

  • Desulfovibrio marinisediminis sp. nov., a novel sulfate-reducing bacterium isolated from coastal marine sediment via enrichment with Casamino acids.

    abstract::To obtain amino acid-utilizing sulfate reducers, enrichment culture was carried out with a medium containing Casamino acids and sulfate and inoculated with coastal marine sediment from the eutrophic Tokyo Bay, Japan. A sulfate reducer, designated strain C/L2(T), was isolated from the sulfide-producing enrichment cultu...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65750-0

    authors: Takii S,Hanada S,Hase Y,Tamaki H,Uyeno Y,Sekiguchi Y,Matsuura K

    更新日期:2008-10-01 00:00:00

  • Kineococcus gypseus sp. nov., isolated from saline sediment.

    abstract::A novel Gram-stain-positive, aerobic, motile, non-spore-forming coccus-shaped actinomycete, designated strain YIM 121300T, was isolated from alkaline sediment in Yuanjiang, Yunnan province, south-west China. Phylogenetic analyses based on the 16S rRNA gene sequence showed that strain YIM 121300T was affiliated to the ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000478

    authors: Li Q,Li G,Chen X,Xu F,Li Y,Xu L,Jiang Y,Jiang C

    更新日期:2015-10-01 00:00:00

  • Desulfuribacillus stibiiarsenatis sp. nov., an obligately anaerobic, dissimilatory antimonate- and arsenate-reducing bacterium isolated from anoxic sediments, and emended description of the genus Desulfuribacillus.

    abstract::A novel anaerobic, Gram-stain-negative, endospore-forming bacterium, designated strain MLFW-2T, was isolated from anoxic sediments collected from the drainage area of a geothermal spring near Mono Lake, CA, USA. Optimal growth was achieved at 34 °C and pH 8.25-8.50 in medium containing 0.75 % (w/v) NaCl. Catalase, but...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001732

    authors: Abin CA,Hollibaugh JT

    更新日期:2017-04-01 00:00:00

  • Ketobacter alkanivorans gen. nov., sp. nov., an n-alkane-degrading bacterium isolated from seawater.

    abstract::Strain GI5T was isolated from a surface seawater sample collected from Garorim Bay (West Sea, Republic of Korea). The isolated strain was aerobic, Gram-stain-negative, rod-shaped, motile by means of a polar flagellum, negative for catalase and weakly positive for oxidase. The optimum growth pH, salinity and temperatur...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002823

    authors: Kim SH,Kim JG,Jung MY,Kim SJ,Gwak JH,Yu WJ,Roh SW,Kim YH,Rhee SK

    更新日期:2018-07-01 00:00:00