当前位置： SCI文献检索 > Scientific Reports期刊下所有文献 > Genome-wide transcriptomic analysis uncovers the molecular basis underlying early flowering and apetalous characteristic in Brassica napus L.

Genome-wide transcriptomic analysis uncovers the molecular basis underlying early flowering and apetalous characteristic in Brassica napus L.

Abstract：

:Floral transition and petal onset, as two main aspects of flower development, are crucial to rapeseed evolutionary success and yield formation. Currently, very little is known regarding the genetic architecture that regulates flowering time and petal morphogenesis in Brassica napus. In the present study, a genome-wide transcriptomic analysis was performed with an absolutely apetalous and early flowering line, APL01, and a normally petalled line, PL01, using high-throughput RNA sequencing. In total, 13,205 differential expressed genes were detected, of which 6111 genes were significantly down-regulated, while 7094 genes were significantly up-regulated in the young inflorescences of APL01 compared with PL01. The expression levels of a vast number of genes involved in protein biosynthesis were altered in response to the early flowering and apetalous character. Based on the putative rapeseed flowering genes, an early flowering network, mainly comprised of vernalization and photoperiod pathways, was built. Additionally, 36 putative upstream genes possibly governing the apetalous character of line APL01 were identified, and six genes potentially regulating petal origination were obtained by combining with three petal-related quantitative trait loci. These findings will facilitate understanding of the molecular mechanisms underlying floral transition and petal initiation in B. napus.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Yu K,Wang X,Chen F,Chen S,Peng Q,Li H,Zhang W,Hu M,Chu P,Zhang J,Guan R

doi

10.1038/srep30576

subject

Has Abstract

pub_date

2016-07-27 00:00:00

pages

30576

issn

2045-2322

pii

srep30576

journal_volume

6

pub_type

杂志文章

相关文献

Scientific Reports文献大全
  • In vivo rotational three-dimensional OCTA analysis of microaneurysms in the human diabetic retina.

    abstract：:The aim of this study was to explore whether rotational three-dimensional (3D) visualization of optical coherence tomography angiography (OCTA) volume data may yield valuable information regarding diabetic retinal microaneurysm (MA) characteristics. In this retrospective, observational study, we collected data from 20...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-019-53357-1

    authors： Borrelli E,Sacconi R,Brambati M,Bandello F,Querques G

    更新日期：2019-11-14 00:00:00

  • Large Optical Gain AlInN-Delta-GaN Quantum Well for Deep Ultraviolet Emitters.

    abstract：:The optical gain and spontaneous emission characteristics of low In-content AlInN-delta-GaN quantum wells (QWs) are analyzed for deep ultraviolet (UV) light emitting diodes (LEDs) and lasers. Our analysis shows a large increase in the dominant transverse electric (TE) polarized spontaneous emission rate and optical ga...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/srep22983

    authors： Tan CK,Sun W,Borovac D,Tansu N

    更新日期：2016-03-10 00:00:00

  • Overexpression of LINC00152 correlates with poor patient survival and knockdown impairs cell proliferation in lung cancer.

    abstract：:We employed RNA sequencing analysis to reveal dysregulated lncRNAs in lung cancer utilizing 461 lung adenocarcinomas and 156 normal lung tissues from 3 separate cohorts. We found that LINC00152 was highly overexpressed in lung tumors as compared to their adjacent normal tissues. Patients with high LINC00152 expression...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-017-03043-x

    authors： Feng S,Zhang J,Su W,Bai S,Xiao L,Chen X,Lin J,Reddy RM,Chang AC,Beer DG,Chen G

    更新日期：2017-06-07 00:00:00

  • Activation and increase of radio-sensitive CD11b+ recruited Kupffer cells/macrophages in diet-induced steatohepatitis in FGF5 deficient mice.

    abstract：:We have recently reported that Kupffer cells consist of two subsets, radio-resistant resident CD68+ Kupffer cells and radio-sensitive recruited CD11b+ Kupffer cells/macrophages (Mφs). Non-alcoholic steatohepatitis (NASH) is characterized not only by hepatic steatosis but also chronic inflammation and fibrosis. In the ...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/srep34466

    authors： Nakashima H,Nakashima M,Kinoshita M,Ikarashi M,Miyazaki H,Hanaka H,Imaki J,Seki S

    更新日期：2016-10-06 00:00:00

  • SPK1-transfected UCMSC has better therapeutic activity than UCMSC in the treatment of experimental autoimmune encephalomyelitis model of Multiple sclerosis.

    abstract：:Multiple Sclerosis (MS), is a chronic inflammatory autoimmune disorder of the central nervous system that leads to chronic demyelination with axonal damage and neuronal loss. Mesenchymal stem cells (MSCs) represent a promising therapeutic approach for MS. In the current study, we investigated the effects of MSCs deriv...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-018-19703-5

    authors： Wang YL,Xue P,Xu CY,Wang Z,Liu XS,Hua LL,Bai HY,Zeng ZL,Duan HF,Li JF

    更新日期：2018-01-29 00:00:00

  • Author Correction: A large-scale RNA interference screen identifies genes that regulate autophagy at different stages.

    abstract：:A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has been fixed in the paper. ...

    journal_title：Scientific reports

    pub_type： 已发布勘误

    doi：10.1038/s41598-019-42889-1

    authors： Guo S,Pridham KJ,Virbasius CM,He B,Zhang L,Varmark H,Green MR,Sheng Z

    更新日期：2019-06-10 00:00:00

  • No evidence for after-effects of noisy galvanic vestibular stimulation on motion perception.

    abstract：:Noisy galvanic vestibular stimulation (nGVS) delivered at imperceptible intensities can improve vestibular function in health and disease. Here we evaluated whether nGVS effects on vestibular function are only present during active stimulation or may exhibit relevant post-stimulation after-effects. Initially, nGVS amp...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-020-59374-9

    authors： Keywan A,Badarna H,Jahn K,Wuehr M

    更新日期：2020-02-13 00:00:00

  • Fast Determination of Flip Angle and T1 in Hyperpolarized Gas MRI During a Single Breath-Hold.

    abstract：:MRI of hyperpolarized media, such as (129)Xe and (3)He, shows great potential for clinical applications. The optimal use of the available spin polarization requires accurate flip angle calibrations and T1 measurements. Traditional flip angle calibration methods are time-consuming and suffer from polarization losses du...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/srep25854

    authors： Zhong J,Ruan W,Han Y,Sun X,Ye C,Zhou X

    更新日期：2016-05-12 00:00:00

  • Understanding tie strength in social networks using a local "bow tie" framework.

    abstract：:Understanding factors associated with tie strength in social networks is essential in a wide variety of settings. With the internet and cellular phones providing additional avenues of communication, measuring and inferring tie strength has become much more complex. We introduce the social bow tie framework, which cons...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-018-27290-8

    authors： Mattie H,Engø-Monsen K,Ling R,Onnela JP

    更新日期：2018-06-19 00:00:00

  • Three-Dimensional Anisotropic Magnetoresistance in the Dirac Node-Line Material ZrSiSe.

    abstract：:The family of materials defined as ZrSiX (X = S, Se, Te) has been established as Dirac node-line semimetals, and subsequent study is urgent to exploit the promising applications of unusual magnetoresistance (MR) properties. Herein, we systematically investigated the anisotropic MR in the newly-discovered Dirac node-li...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-018-27148-z

    authors： Pan H,Tong B,Yu J,Wang J,Fu D,Zhang S,Wu B,Wan X,Zhang C,Wang X,Song F

    更新日期：2018-06-19 00:00:00

  • AKT-mTOR signaling modulates the dynamics of IRE1 RNAse activity by regulating ER-mitochondria contacts.

    abstract：:Inositol Requiring Enzyme-1 (IRE1) is the most conserved transducer of the Unfolded Protein Response (UPR), a surveillance mechanism that ensures homeostasis of the endoplasmic reticulum (ER) in eukaryotes. IRE1 activation orchestrates adaptive responses, including lipid anabolism, metabolic reprogramming, increases i...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-017-16662-1

    authors： Sanchez-Alvarez M,Del Pozo MA,Bakal C

    更新日期：2017-11-28 00:00:00

  • Yield-phenology relations and water use efficiency of maize (Zea mays L.) in ridge-furrow mulching system in semiarid east African Plateau.

    abstract：:Yield-phenology relation is a critical issue affecting rainfed maize field productivity in semiarid east African Plateau (EAP). We first introduced Chinese ridge-furrow mulching (RFM) system to EAP, using three maize cultivars with early-, mid- and late-maturing traits as test materials. A two-year field experiment wa...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-017-03372-x

    authors： Mo F,Wang JY,Li FM,Nguluu SN,Ren HX,Zhou H,Zhang J,Kariuki CW,Gicheru P,Kavagi L,Cheruiyot WK,Xiong YC

    更新日期：2017-06-12 00:00:00

  • Worldwide Prevalence of Human Papillomavirus and Relative Risk of Prostate Cancer: A Meta-analysis.

    abstract：:Despite the increasing number of studies conducted recently to evaluate the association between HPV infections and the risk of prostate cancer, the results remain inconclusive. Furthermore, the prevalence and distribution of overall and individual HPV types worldwide in prostate cancer has not been reported until now....

    journal_title：Scientific reports

    pub_type： 杂志文章,meta分析

    doi：10.1038/srep14667

    authors： Yang L,Xie S,Feng X,Chen Y,Zheng T,Dai M,Zhou CK,Hu Z,Li N,Hang D

    更新日期：2015-10-06 00:00:00

  • Urban conservation hotspots: predation release allows the grassland-specialist burrowing owl to perform better in the city.

    abstract：:Although habitat transformation is one of the main causes of biodiversity loss, there are many examples of species successfully occupying and even proliferating in highly human-modified habitats such are the cities. Thus, there is an increasing interest in understanding the drivers favoring urban life for some species...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-017-03853-z

    authors： Rebolo-Ifrán N,Tella JL,Carrete M

    更新日期：2017-06-14 00:00:00

  • Water and Blood Repellent Flexible Tubes.

    abstract：:A top-down scalable method to produce flexible water and blood repellent tubes is introduced. The method is based on replication of overhanging nanostructures from an aluminum tube template to polydimethylsiloxane (PDMS) via atomic layer deposition (ALD) assisted sacrificial etching. The nanostructured PDMS/titania tu...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-017-16369-3

    authors： Hoshian S,Kankuri E,Ras RHA,Franssila S,Jokinen V

    更新日期：2017-11-22 00:00:00

  • Carotid plaque and bone density and microarchitecture in psoriatic arthritis: the correlation with soluble ST2.

    abstract：:Psoriatic arthritis (PsA) patients have increased risk of both atherosclerosis and osteoporosis. Previous studies revealed that IL-33/ST2 axis may be related to both conditions; however, these associations were never evaluated in a single patients' group. Here we explored the association among plasma levels of IL-33 a...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/srep32116

    authors： Shen J,Shang Q,Wong CK,Li EK,Kun EW,Cheng IT,Li M,Li TK,Zhu TY,Yu CM,Qin L,Tam LS

    更新日期：2016-08-24 00:00:00

  • The role of Hurst exponent on cold field electron emission from conducting materials: from electric field distribution to Fowler-Nordheim plots.

    abstract：:This work considers the effects of the Hurst exponent (H) on the local electric field distribution and the slope of the Fowler-Nordheim (FN) plot when considering the cold field electron emission properties of rough Large-Area Conducting Field Emitter Surfaces (LACFESs). A LACFES is represented by a self-affine Weiers...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/srep10175

    authors： de Assis TA

    更新日期：2015-06-02 00:00:00

  • Magnetic and electronic evolutions of hydrogenated VTe₂ monolayer under tension.

    abstract：:Two-dimensional nanostructures with controllable magnetic and electronic properties are desirable for their versatile applications in quantum devices. Here, we present a first-principles design on their magnetic and electronic switching controlled by tension. We find that hydrogenated VTe2 monolayer experiences a tran...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/srep07524

    authors： Pan H

    更新日期：2014-12-17 00:00:00

  • Aggressive desert goby males also court more, independent of the physiological demands of salinity.

    abstract：:Both between- and within-individual variation in behaviour can be important in determining mating opportunities and reproductive outcomes. Such behavioural variability can be induced by environmental conditions, especially if individuals vary in their tolerance levels or resource allocation patterns. We tested the eff...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-018-27651-3

    authors： Lehtonen TK,Svensson PA,Wong BBM

    更新日期：2018-06-19 00:00:00

  • A jumping shape memory alloy under heat.

    abstract：:Shape memory alloys are typical temperature-sensitive metallic functional materials due to superelasticity and shape recovery characteristics. The conventional shape memory effect involves the formation and deformation of thermally induced martensite and its reverse transformation. The shape recovery process usually t...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/srep21754

    authors： Yang S,Omori T,Wang C,Liu Y,Nagasako M,Ruan J,Kainuma R,Ishida K,Liu X

    更新日期：2016-02-16 00:00:00

  • Unscrambling phylogenetic effects and ecological determinants of chromosome number in major angiosperm clades.

    abstract：:As variations in the chromosome number are recognized to be of evolutionary interest but are also widely debated in the literature, we aimed to quantitatively test for possible relationships among the chromosome number, plant traits, and environmental factors. In particular, the chromosome number and drivers of its va...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-018-32515-x

    authors： Carta A,Bedini G,Peruzzi L

    更新日期：2018-09-24 00:00:00

  • Quantitative proteomics of Xenopus laevis embryos: expression kinetics of nearly 4000 proteins during early development.

    abstract：:While there is a rich literature on transcription dynamics during the development of many organisms, protein data is limited. We used iTRAQ isotopic labeling and mass spectrometry to generate the largest developmental proteomic dataset for any animal. Expression dynamics of nearly 4,000 proteins of Xenopus laevis was ...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/srep04365

    authors： Sun L,Bertke MM,Champion MM,Zhu G,Huber PW,Dovichi NJ

    更新日期：2014-03-14 00:00:00

  • Molecular chaperone accumulation as a function of stress evidences adaptation to high hydrostatic pressure in the piezophilic archaeon Thermococcus barophilus.

    abstract：:The accumulation of mannosyl-glycerate (MG), the salinity stress response osmolyte of Thermococcales, was investigated as a function of hydrostatic pressure in Thermococcus barophilus strain MP, a hyperthermophilic, piezophilic archaeon isolated from the Snake Pit site (MAR), which grows optimally at 40 MPa. Strain MP...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/srep29483

    authors： Cario A,Jebbar M,Thiel A,Kervarec N,Oger PM

    更新日期：2016-07-05 00:00:00

  • Author Correction: Comparison of DNA-, PMA-, and RNA-based 16S rRNA Illumina sequencing for detection of live bacteria in water.

    abstract：:A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has been fixed in the paper. ...

    journal_title：Scientific reports

    pub_type： 已发布勘误

    doi：10.1038/s41598-018-35437-w

    authors： Li R,Tun HM,Jahan M,Zhang Z,Kumar A,Dilantha Fernando WG,Farenhorst A,Khafipour E

    更新日期：2018-11-22 00:00:00

  • Site-specific ADP-ribosylation of histone H2B in response to DNA double strand breaks.

    abstract：:ADP-ribosyltransferases (ARTs) modify proteins with single units or polymers of ADP-ribose to regulate DNA repair. However, the substrates for these enzymes are ill-defined. For example, although histones are modified by ARTs, the sites on these proteins ADP-ribosylated following DNA damage and the ARTs that catalyse ...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/srep43750

    authors： Rakhimova A,Ura S,Hsu DW,Wang HY,Pears CJ,Lakin ND

    更新日期：2017-03-02 00:00:00

  • DC-SIGN and Toll-like receptor 4 mediate oxidized low-density lipoprotein-induced inflammatory responses in macrophages.

    abstract：:The regulation of inflammatory responses by innate immune receptors is recognized as a crucial step in the development of atherosclerosis, although the precise molecular mechanisms remain to be elucidated. This study focused on illustrating the roles of dendritic cell-specific intercellular adhesion molecule-3-grabbin...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-017-03740-7

    authors： Yang K,Liu X,Liu Y,Wang X,Cao L,Zhang X,Xu C,Shen W,Zhou T

    更新日期：2017-06-12 00:00:00

  • Reconstructing the evolutionary history of pandemic foot-and-mouth disease viruses: the impact of recombination within the emerging O/ME-SA/Ind-2001 lineage.

    abstract：:Foot-and-mouth disease (FMD) is a highly contagious disease of livestock affecting animal production and trade throughout Asia and Africa. Understanding FMD virus (FMDV) global movements and evolution can help to reconstruct the disease spread between endemic regions and predict the risks of incursion into FMD-free co...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-018-32693-8

    authors： Bachanek-Bankowska K,Di Nardo A,Wadsworth J,Mioulet V,Pezzoni G,Grazioli S,Brocchi E,Kafle SC,Hettiarachchi R,Kumarawadu PL,Eldaghayes IM,Dayhum AS,Meenowa D,Sghaier S,Madani H,Abouchoaib N,Hoang BH,Vu PP,Dukpa K,Gu

    更新日期：2018-10-02 00:00:00

  • An efficient micropropagation protocol for an endangered ornamental tree species (Magnolia sirindhorniae Noot. & Chalermglin) and assessment of genetic uniformity through DNA markers.

    abstract：:Magnolia sirindhorniae Noot. & Chalermglin is an endangered species with high ornamental and commercial value that needs to be urgently protected and judiciously commercialized. In this study, a protocol for efficient regeneration of this species is standardized. The lateral buds of the M. sirindhorniae plant were use...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-019-46050-w

    authors： Cui Y,Deng Y,Zheng K,Hu X,Zhu M,Deng X,Xi R

    更新日期：2019-07-03 00:00:00

  • Association between plasma levels of homocysteine, folate, and vitamin B12, and dietary folate intake and hypertension in a cross-sectional study.

    abstract：:There are few studies examining the association between homocysteine (Hcy) level and the risk of hypertension with consideration for folate and vitamin B12 as related to Hcy level. We simultaneously examined the associations of plasma levels of Hcy, folate, and vitamin B12, and dietary folate intake with the prevalenc...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-020-75267-3

    authors： Tamura T,Kuriyama N,Koyama T,Ozaki E,Matsui D,Kadomatsu Y,Tsukamoto M,Kubo Y,Okada R,Hishida A,Sasakabe T,Kawai S,Naito M,Takashima N,Kadota A,Tanaka K,Hara M,Suzuki S,Nakagawa-Senda H,Takezaki T,Shimoshikiryo I,

    更新日期：2020-10-28 00:00:00

  • Genetic insights into underground responses to Fusarium graminearum infection in wheat.

    abstract：:The ongoing global intensification of wheat production will likely be accompanied by a rising pressure of Fusarium diseases. While utmost attention was given to Fusarium head blight (FHB) belowground plant infections of the pathogen have largely been ignored. The current knowledge about the impact of soil borne Fusari...

    journal_title：Scientific reports

    pub_type： 杂志文章

    doi：10.1038/s41598-018-31544-w

    authors： Voss-Fels KP,Qian L,Gabur I,Obermeier C,Hickey LT,Werner CR,Kontowski S,Frisch M,Friedt W,Snowdon RJ,Gottwald S

    更新日期：2018-09-03 00:00:00