Abstract:
:Beak and feather disease virus (BFDV) is an avian circovirus, and it has a single-stranded DNA genome. It causes a fatal disease in parrots called psittacine beak and feather disease (PBFD). After screening of samples collected from Taiwan using PCR, complete genome sequences of isolates from 21 samples from various species of parrot were obtained. The nucleotide sequences of the replication-associated protein gene (rep) and the amino acid sequences of the replication-associated protein (Rep) were more conserved than the nucleotide sequences of the capsid protein gene (cp) and the amino acid sequences of the capsid protein (CP). In Bayesian phylogenetic analysis, the topology of the complete genome sequence was similar to that of the rep gene alone. Recombination events were identified in Taiwan isolates. Recombination hot spots were mainly located in the intergenic region between the 3' ends of the rep and cp genes and at the 5' end of the cp gene. The 5' end and the middle of the rep gene were found to be recombination cold spots. Despite the overall negative selection that was observed for the rep and cp genes, one and 18 positive selected sites were found for the rep and cp gene, respectively.
journal_name
Arch Viroljournal_title
Archives of virologyauthors
Huang SW,Chiang YC,Chin CY,Tang PC,Liu PC,Wang CYdoi
10.1007/s00705-016-2963-zsubject
Has Abstractpub_date
2016-11-01 00:00:00pages
2969-88issue
11eissn
0304-8608issn
1432-8798pii
10.1007/s00705-016-2963-zjournal_volume
161pub_type
杂志文章abstract::The complete nucleotide sequence of the ssRNA genome of a Chinese GPV isolate of barley yellow dwarf virus (BYDV) was determined. It comprised 5673 nucleotides, and the deduced genome organization resembled that of members of the genus Polerovirus. It was most closely related to cereal yellow dwarf virus-RPV (77% nt i...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-009-0415-8
更新日期:2009-01-01 00:00:00
abstract::A physical map for the genome of Spodoptera littoralis (Egyptian cottonworm) nuclear polyhedrosis virus of B-type (S1MNPV-B) [Cherry CL, Summers MD (1985) J Invertebr Pathol 46: 289-295] was prepared using the restriction endonucleases SmaI, SfiI, NotI, ApaI, KpnI, BstEII, PstI, SacI, and HindIII. The size of the geno...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01313815
更新日期:1989-01-01 00:00:00
abstract::The complete coding sequences were determined for four putative vesiculoviruses isolated from fish. Sequence alignment and phylogenetic analysis based on the predicted amino acid sequences of the five main proteins assigned tench rhabdovirus and grass carp rhabdovirus together with spring viraemia of carp and pike fry...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-013-1711-x
更新日期:2013-11-01 00:00:00
abstract::A pathogen of significance in the aquaculture sector, the Gram-negative marine bacterium Vibrio parahaemolyticus causes gastroenteritis associated with consumption of improperly prepared seafood. This bacterium can be controlled using lytic bacteriophages as an alternative to antibiotics. ϕVP-1 is a lytic phage of V. ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-019-04493-6
更新日期:2020-02-01 00:00:00
abstract::A recombinant encephalomyocarditis virus (rEMCV2887A-egfp) expressing the enhanced green fluorescent protein (EGFP) was produced. The EGFP gene was inserted in frame within the leader protein coding sequence of a full-length cDNA clone of EMCV. RNA transcripts derived from the recombinant full-length cDNA were synthes...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-006-0746-7
更新日期:2006-09-01 00:00:00
abstract::Structural analysis of the US-segment of a viable temperature sensitive human cytomegalovirus mutant (ts9) by the use of restriction enzymes, specific amplifications by the polymerase chain reaction and DNA sequencing, revealed deletions of open reading frames (orf) US14 and part of US15 in addition to that concerning...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01311183
更新日期:1994-01-01 00:00:00
abstract::The recent H5N1 avian influenza outbreaks in Asia spread over more than 8 countries. It has caused enormous economic loss and grand challenges for the public health. During these breakouts we isolated three strains of H5N1 Avian Influenza Virus (AIV) from chickens and one from duck in different farms of Southern China...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-004-0474-9
更新日期:2005-06-01 00:00:00
abstract::Thrips palmi transmits the tospoviruses watermelon bud necrosis (WBNV) and groundnut bud necrosis virus (GBNV) in persistent propagative way. Little is known about the T. palmi-WBNV and -GBNV relationship. In this study, we report the effects of WBNV and GBNV infection on the life history traits of T. palmi. Both WBNV...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-019-04381-z
更新日期:2019-11-01 00:00:00
abstract::Rabbit convalescent and hyperimmune sera, human patient and blood donor sera, as well as cerebrospinal fluids of humans with herpes simplex virus encephalitis all recognize similar major antigenic components in herpes simplex virus infected rabbit or human cells as shown by electrophoretic analysis of immunoprecipitat...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01314855
更新日期:1977-01-01 00:00:00
abstract::Infectious cDNA clones originally derived from a mild strain of Pepper mild mottle virus were constructed by replacing residue 649, a critical point for attenuation of this virus, with all possible amino acids. All clones were infectious to pepper plants and induced a variety of symptoms, including no visible symptoms...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-009-0312-1
更新日期:2009-01-01 00:00:00
abstract::A persistent, defective infection by an unknown strain of Newcastle disease virus (NDV) appeared accidentally in established lines of pig, ox and sheep kidney cells. Virus particles released from the persistently infected cells were not infectious and were deficient in neuraminidase activity. Synthesis of some of the ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01318009
更新日期:1976-01-01 00:00:00
abstract::Chilli veinal mottle virus (ChiVMV) is an important plant pathogen with a wide host range. The genetic structure of ChiVMV was investigated by analyzing the coat protein (CP) genes of 87 ChiVMV isolates from seven Asian regions. Pairwise F ST values between ChiVMV populations ranged from 0.108 to 0.681, indicating a s...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-016-2761-7
更新日期:2016-05-01 00:00:00
abstract::Scutellaria baicalensis Georgi, a Chinese herbal decoction, has been used for the treatment of the common cold, fever and influenza virus infections. In previous studies, we found that oral administration of baicalein resulted in the inhibition of influenza A virus replication in vivo, which was linked to baicalin in ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-014-2192-2
更新日期:2014-12-01 00:00:00
abstract::The recombinant vaccinia virus VG9 and the STAT3 inhibitor Stattic were combined to kill cancer cells via both oncolytic activity and inhibition of STAT3 phosphorylation in cells. The combinatory anti-tumour activity of these compounds was superior to the activity of VG9 or Stattic alone in vivo. The inhibition of tum...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-019-04257-2
更新日期:2019-07-01 00:00:00
abstract::Genomic DNA of blueberry red ringspot virus (genus Soymovirus, family Caulimoviridae) from highbush blueberry plants growing for years in the Czech Republic and Slovenia was sequenced. The circular dsDNA genomes consist of 8,303 and 8,299 nt, respectively, and contain eight open reading frames (ORFs) longer than 100 a...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-011-1077-x
更新日期:2011-10-01 00:00:00
abstract::Dengue virus nonstructural protein 1 (NS1) is a glycoprotein involved in viral RNA replication. NS1 associates with host cell proteins and can be found in lipid raft domains on the host cell surface, suggesting an involvement in signal transduction events. In this work, we observed that NS1 expression in HepG2 cells i...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-011-0969-0
更新日期:2011-07-01 00:00:00
abstract::Fragaria (strawberry) and Rubus species (blackberry, wild blackberry, red raspberry and black raspberry) were thought to be infected with distinct isolates of Tobacco streak virus (TSV). Employing serology and nucleic acid hybridization it has been shown that these isolates form a cluster distinct from other strains o...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-004-0330-y
更新日期:2004-10-01 00:00:00
abstract::Antigenic relationships between the Wa, Hochi, Ito, Hosokawa and Nemoto strains of human rotavirus, the SA-11 strain of simian rotavirus, the Lincoln strain of bovine rotavirus, the OSU strain of porcine rotavirus and the R-2 strain of lapine rotavirus, which were all established in cell culture, were studied by neutr...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01341726
更新日期:1982-01-01 00:00:00
abstract::Blue-eye disease is an emergent viral swine infection caused by porcine rubulavirus (PoRV). We have developed a qRT-PCR method to detect and quantify expression of the nucleoprotein gene for different PoRV strains. The limit of detection for this assay was 10(2) copies of synthetic RNA. Viral RNA from PoRV was detecta...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-013-1672-0
更新日期:2013-09-01 00:00:00
abstract::Tunicamycin inhibited the production of infectious Borna disease virus (BDV) and glycosidase treatment eliminated the infectivity of cell-free virus. A glycoprotein of approximately 17 kDa, found in association with infectious virus, was identified by Concanavalin A binding. ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01309486
更新日期:1994-01-01 00:00:00
abstract::Bokeloh bat lyssavirus (BBLV) was found in Myotis nattereri for the first time in northeastern France in July 2012. The complete genome sequence of the virus from the infected Natterer's bat was determined by whole-genome sequencing and compared to that of the first BBLV strain isolated in 2010 in Germany and with tho...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-013-1747-y
更新日期:2013-11-01 00:00:00
abstract::Grapevine Pinot gris virus (GPGV), a member of the genus Trichovirus in the family Betaflexiviridae, was recently discovered in Italy and subsequently in other European countries and in Korea. In this study, we assessed the occurrence of GPGV in 441 samples from Western and Eastern Europe collected over the period 200...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-015-2718-2
更新日期:2016-03-01 00:00:00
abstract::This study examines viral protein and DNA synthesis in Spodoptera frugiperda multicapsid nuclear polyhedrosis virus (SfMNPV) infections of S. frugiperda and Trichoplusia ni cells. A total of 28 infected cell specific polypeptides (ICSPs) were detected in the productive S. frugiperda cells. Of these, 14 were identified...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01310626
更新日期:1990-01-01 00:00:00
abstract::The process of fusion from without (FFWO) induced by herpes simplex virus (HSV) was analyzed by using various inhibitors and compared to fusion from within (FFWI). The fate of certain elements of the cytoskeleton after FFWO was also investigated. Our experiments demonstrate FFWO as a very suitable system for study of ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01310490
更新日期:1991-01-01 00:00:00
abstract::Transmission electron microscopy was used to confirm the presence of picorna-like virus particles presumed to be Homalodisca coagulata virus-1 (HoCV-1) in the midgut region of adult glassy-winged sharpshooters (GWSS). In addition, we offer a reverse transcription polymerase chain reaction (RT-PCR) assay for the detect...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-007-1066-2
更新日期:2008-01-01 00:00:00
abstract::The complete genome sequence of a severe isolate of broad bean true mosaic virus (genus Comovirus, subfamily Comovirinae, family Secoviridae) is presented. Comparison of the amino acid sequences of the capsid proteins and the polymerase showed striking differences to other comoviruses and highest similarities to legum...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-010-0668-2
更新日期:2010-07-01 00:00:00
abstract::Evidence is presented that the excess pool of penton complexes purified from adenovirus type 1-infected HEp-2 cells also carry an endonucleolytic activity. The effect was measured with both E. coli and adenovirus type 1 double-stranded DNA substrates. The use of agarose gels for assaying the endonuclease activity allo...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01315620
更新日期:1976-01-01 00:00:00
abstract::Systemic infection of tobacco with tobacco mosaic virus (TMV) strain WU1, is accompanied by massive accumulation of the virus-coded non-structural 126 kDa protein in X-bodies. The development of X-bodies and the time course of the increase in 126 kDa protein in systemically infected leaves were analyzed by immunocytoc...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01309584
更新日期:1992-01-01 00:00:00
abstract::We determined the complete nucleotide sequence of a broad bean wilt virus 2 (BBWV-2) isolate from gentian in Japan. The full-length RNA1 and RNA2 sequences, excluding poly(A) tails, were 5955 and 3600 nucleotides long, respectively. Analysis indicated that, in contrast to other BBWV-2 isolates, the 5' end of both RNA1...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-013-1625-7
更新日期:2013-07-01 00:00:00
abstract::A rice protein homologous to eukaryotic translation elongation factor 1A (eEF-1A) was found to interact with the Pns6 of rice ragged stunt virus (RRSV), the type member of the genus Oryzavirus, family Reoviridae, in yeast two-hybrid screening. The interaction between the rice protein, designated OseEF-1A, and RRSV Pns...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-013-1703-x
更新日期:2013-10-01 00:00:00