Massiliapinisoli sp. nov., isolated from forest soil.

Abstract:

:A Gram-stain-negative, aerobic, motile with a single polar flagellum, non-spore-forming and rod-shaped bacterial strain named T33T was isolated from forest soil collected at Kyonggi University, South Korea. The strain was catalase- and oxidase-positive, colonies grew on R2A agar at 32 °C. Sequencing of the 16S rRNA gene and phylogenetic analysis revealed that T33T represented a member of the genus Massilia and is closely related to Massilia niastensis KACC 12599T (98.7 % sequence similarity), Massilia aerilata KACC 12505T (98.5 %), Massilia tieshanensis KACC 14940T (98.4 %), Massilia kyonggiensis KACC 17471T (98.1 %), Massilia norwichensis LMG 28164T (97.7 %), Massilia haematophila CCUG 38318T (97.4 %), Massilia consociata CCUG 58010T (97.3 %), and Massilia niabensis KACC 12632T (97.0 %). Ubiquinone Q-8 is the predominant respiratory quinone, and phosphatidylethanolamine, phosphatidylglycerol, and diphosphatidylglycerol are the major polar lipids. The major fatty acids are summed feature 3 (C16 : 1ω6c and/or C16 : 1ω7c), summed feature 8 (C18 : 1ω6c and/or C18 : 1ω7c), and C16 : 0. DNA-DNA hybridization revealed <70 % relatedness between strain T33T and the most closely related type strains. The DNA G+C content of strain T33Tis 69.4 mol%. Based on physiological and biochemical test results, Massilia pinisoli T33T is proposed as a novel species of the genus Massilia. The type strain is T33T (=KACC 18748T=KEMB 9005-368T=JCM 31316T).

authors

Altankhuu K,Kim J

doi

10.1099/ijsem.0.001249

subject

Has Abstract

pub_date

2016-09-01 00:00:00

pages

3669-3674

issue

9

eissn

1466-5026

issn

1466-5034

journal_volume

66

pub_type

杂志文章
  • Phylogenetic placement of two previously described intranuclear bacteria from the ciliate Paramecium bursaria (Protozoa, Ciliophora): 'Holospora acuminata' and 'Holospora curviuscula'.

    abstract::'Holospora acuminata' infects micronuclei of Paramecium bursaria (Protozoa, Ciliophora), whereas 'Holospora curviuscula' infects the macronucleus in other clones of the same host species. Because these micro-organisms have not been cultivated, their description has been based only on some morphological properties and ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.046631-0

    authors: Rautian MS,Wackerow-Kouzova ND

    更新日期:2013-05-01 00:00:00

  • Flavobacterium glycines sp. nov., a facultative methylotroph isolated from the rhizosphere of soybean.

    abstract::An aerobic, yellow-pigmented, facultatively methylotrophic, Gram-staining-negative, non-spore-forming bacterium, designated strain Gm-149(T), was isolated from the rhizosphere of cultivated soybean in India. Cells were motile by gliding. The predominant cellular fatty acids were iso-C(15 : 0), summed feature 3 (compri...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.014019-0

    authors: Madhaiyan M,Poonguzhali S,Lee JS,Lee KC,Sundaram S

    更新日期:2010-09-01 00:00:00

  • Polyphasic re-examination of Yarrowia lipolytica strains and the description of three novel Candida species: Candida oslonensis sp. nov., Candida alimentaria sp. nov. and Candida hollandica sp. nov.

    abstract::The type strain of Yarrowia lipolytica and 38 strains identified as Yarrowia lipolytica, four strains of Candida deformans, including the type and two subcultures of the type, two strains of Candida galli and six unidentified strains that resembled Y. lipolytica were examined by PCR fingerprints using primers M13 and ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65200-0

    authors: Knutsen AK,Robert V,Poot GA,Epping W,Figge M,Holst-Jensen A,Skaar I,Smith MT

    更新日期:2007-10-01 00:00:00

  • Amphritea spongicola sp. nov., isolated from a marine sponge, and emended description of the genus Amphritea.

    abstract::A Gram-stain-negative, rod-shaped (1.2-2.1 μm × 0.8-0.9 μm), flagellated and motile marine bacterium, designated MEBiC05461T, was isolated from a marine sponge inhabiting Micronesia. Strain MEBiC05461T was oxidase-negative and catalase-positive. Growth was observed at 8.0-35.6 °C (optimum 30.0 °C), at pH 5.0-9.0 (opti...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000188

    authors: Jang H,Yang SH,Seo HS,Lee JH,Kim SJ,Kwon KK

    更新日期:2015-06-01 00:00:00

  • Limibaculum halophilum gen. nov., sp. nov., a new member of the family Rhodobacteraceae.

    abstract::A Gram-stain-negative, cream-pigmented, aerobic, non-motile, non-spore-forming and short-rod-shaped bacterial strain, designated CAU 1123T, was isolated from mud from reclaimed land. The strain's taxonomic position was investigated by using a polyphasic approach. Strain CAU 1123T grew optimally at 37 °C and at pH 7.5 ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002200

    authors: Shin YH,Kim JH,Suckhoom A,Kantachote D,Kim W

    更新日期:2017-10-01 00:00:00

  • Notification that new names and new combinations have appeared in volume 56, part 10, of the IJSEM.

    abstract::This listing of names published in a previous issue of the IJSEM is provided as a service to bacteriology to assist in the recognition of new names and new combinations. This procedure was proposed by the Judicial Commission [Minute 11(ii), Int J Syst Bacteriol 41 (1991), p. 185]. The names given herein are listed acc...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64874-0

    authors:

    更新日期:2007-01-01 00:00:00

  • Ramlibacter alkalitolerans sp. nov., alkali-tolerant bacterium isolated from soil of ginseng.

    abstract::A novel bacterial strain, designated CJ661T, was isolated from soil of ginseng in Anseong, South Korea. Cells of strain CJ661T were white-coloured, Gram-staining-negative, non-motile, aerobic and rod-shaped. Strain CJ661T grew optimally at 30 °C and pH 7.0. The analysis of 16S rRNA gene sequence of strain CJ661T showe...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002342

    authors: Lee DH,Cha CJ

    更新日期:2017-11-01 00:00:00

  • Amycolatopsis dongchuanensis sp. nov., an actinobacterium isolated from soil.

    abstract::A novel actinomycete strain, designated YIM 75904(T), was isolated from a soil sample that had been collected from a dry and hot river valley in Dongchuan county, Yunnan province, south-western China. The taxonomic position of the novel strain was investigated by a polyphasic approach. In phylogenetic analyses based o...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.038125-0

    authors: Nie GX,Ming H,Li S,Zhou EM,Cheng J,Tang X,Feng HG,Tang SK,Li WJ

    更新日期:2012-11-01 00:00:00

  • Persicitalea jodogahamensis gen. nov., sp. nov., a marine bacterium of the family 'Flexibacteraceae', isolated from seawater in Japan.

    abstract::An obligately aerobic, Gram-negative, non-motile, pale-pink-pigmented, rod-shaped strain, designated Shu-9-SY12-35C(T), was isolated from seawater in Jodogahama, Iwate, Japan, and was subjected to a polyphasic taxonomic examination. Phylogenetic analyses based on the 16S rRNA gene sequence revealed that the novel isol...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64792-0

    authors: Yoon J,Ishikawa S,Kasai H,Yokota A

    更新日期:2007-05-01 00:00:00

  • Myroides xuanwuensis sp. nov., a mineral-weathering bacterium isolated from forest soil.

    abstract::A Gram-reaction-negative, aerobic, non-motile, yellow-pigmented, rod-shaped bacterium, designated strain TH-19(T), was isolated from a forest soil sample in Jiangsu province, China. On the basis of 16S rRNA gene sequence similarity, strain TH-19(T) was shown to belong to the genus Myroides, a member of the phylum Bact...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.056739-0

    authors: Zhang ZD,He LY,Huang Z,Sheng XF

    更新日期:2014-02-01 00:00:00

  • Actinomadura adrarensis sp. nov., an actinobacterium isolated from Saharan soil.

    abstract::A novel actinobacterial strain, designated ACD12T, was isolated from a Saharan soil sample collected from Adrar province, southern Algeria. A polyphasic study was carried out to establish the taxonomic position of this strain. Strain ACD12T was observed to form extensively branched substrate mycelia. Aerial mycelium w...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001114

    authors: Lahoum A,Bouras N,Verheecke C,Mathieu F,Schumann P,Spröer C,Klenk HP,Sabaou N

    更新日期:2016-07-01 00:00:00

  • Bacillus marmarensis sp. nov., an alkaliphilic, protease-producing bacterium isolated from mushroom compost.

    abstract::A Gram-stain-positive, obligately alkaliphilic bacterium designated strain GMBE 72(T) was isolated from mushroom compost from Yalova, located in the Marmara region of Turkey. Cells were aerobic, straight rods and they formed subterminal to terminal ellipsoidal endospores. The isolate was catalase-positive, oxidase-neg...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.012369-0

    authors: Denizci AA,Kazan D,Erarslan A

    更新日期:2010-07-01 00:00:00

  • Vibrio hispanicus sp. nov., isolated from Artemia sp. and sea water in Spain.

    abstract::Three Gram-negative, small, motile, rod-shaped bacteria were isolated from Artemia sp. and sea water in Barcelona, Spain, during 1990 and 1991. They were fermentative, oxidase-positive, sensitive to vibriostatic agent O/129, arginine dihydrolase-positive, lysine and ornithine decarboxylase-negative and grew in the abs...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02775-0

    authors: Gomez-Gil B,Thompson FL,Thompson CC,Garcia-Gasca A,Roque A,Swings J

    更新日期:2004-01-01 00:00:00

  • Tenuibacillus multivorans gen. nov., sp. nov., a moderately halophilic bacterium isolated from saline soil in Xin-Jiang, China.

    abstract::Two Gram-positive, rod-shaped, spore-forming and moderately halophilic bacteria (strains 28-1T, 28-4), isolated from a soil sample from a neutral salt lake in Xin-Jiang, China, were characterized polyphasically. On the basis of fasta (ungapped) analyses of 16S rRNA gene sequences, strains 28-1T and 28-4 were shown to ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63180-0

    authors: Ren PG,Zhou PJ

    更新日期:2005-01-01 00:00:00

  • Proposal of Rhodoplanes tepidamans sp. nov. to accommodate the thermotolerant phototrophic bacterium previously referred to as 'Rhodoplanes (Rhodopseudomonas) cryptolactis'.

    abstract::Previously we proposed the reclassification of a thermotolerant phototrophic bacterium, 'Rhodopseudomonas cryptolactis' Stadtwald-Demchick et al. 1990, as 'Rhodoplanes cryptolactis' nom. rev., comb. nov. with strain DSM 9987T (ATCC 49414T) as the type strain. However, while both the names 'Rhodopseudomonas cryptolacti...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001752

    authors: Hiraishi A,Okamura K

    更新日期:2017-05-01 00:00:00

  • Natrialba swarupiae sp. nov., a halophilic archaeon isolated from a hypersaline lake in India.

    abstract::A haloarchaeal strain (ESP3B_9T) was isolated from the salt pan of Sambhar salt lake, Rajasthan, India. Cells were coccoid, non-motile, Gram-stain-negative and formed reddish-pink pigmented colonies. The strain was aerobic, able to grow at 35-55 °C (optimum, 40 °C), in 20-35 % (25 %) NaCl and pH 8-10 (pH 9). Mg2+ not ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003986

    authors: Kajale S,Deshpande N,Pali S,Shouche Y,Sharma A

    更新日期:2020-03-01 00:00:00

  • Synonymy of the yeast genera Moniliella and Trichosporonoides and proposal of Moniliella fonsecae sp. nov. and five new species combinations.

    abstract::Analyses of nucleotide sequences from the D1/D2 domains of the large-subunit rDNA and phenotypic characteristics showed that the genera Moniliella and Trichosporonoides are members of a single, monophyletic clade that would be best represented by a single anamorphic genus. On the basis of taxonomic priority, we propos...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65117-0

    authors: Rosa CA,Jindamorakot S,Limtong S,Nakase T,Lachance MA,Fidalgo-Jiménez A,Daniel HM,Pagnocca FC,Inácio J,Morais PB

    更新日期:2009-02-01 00:00:00

  • Paracoccus panacisoli sp. nov., isolated from a forest soil cultivated with Vietnamese ginseng.

    abstract::A novel bacterial strain, designated DCY94(T), was isolated from forest soil cultivated with ginseng in Vietnam. The strain was Gram-reaction-negative, facultatively anaerobic, non-motile, rod-shaped and catalase- and oxidase-positive. 16S rRNA gene sequence analysis demonstrated that strain DCY94(T) was closely relat...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000125

    authors: Nguyen NL,Kim YJ,Hoang VA,Tran BT,Pham HS,Yang DC

    更新日期:2015-05-01 00:00:00

  • Paraflavitalea devenefica sp. nov., isolated from urban soil.

    abstract::A Gram-stain-negative, rod-shaped, mesophilic, milky white-pigmented, aerobic, non-spore-forming and non-flagellated bacterium, designated strain X16T, was isolated from urban soil of Zibo, Shandong, China. According to 16S rRNA gene sequence analysis, the isolate showed highest similarities with Paraflavitalea soli 5...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004587

    authors: Hou X,Liu H,Shang Y,Mao S,Li S,Sang F,Deng H,Wang L,Kong L,Zhang C,Ding Z,Gao Y,Wei S,Chen Z

    更新日期:2021-01-01 00:00:00

  • Sphingomonas lacunae sp. nov., isolated from a freshwater pond.

    abstract::A novel bacterial strain, designated CSW-10T, isolated from a freshwater pond in Taiwan, was characterized using a polyphasic taxonomic approach. Cells were Gram-stain-negative, aerobic, non-motile, rod-shaped and formed yellow-coloured colonies. Optimal growth occurred at 30 °C, pH 7, and in the absence of NaCl. Phyl...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004491

    authors: Sheu SY,Yang CC,Sheu DS,Tsai JM,Chen WM

    更新日期:2020-11-01 00:00:00

  • Rhabdobacter roseus gen. nov., sp. nov., isolated from soil.

    abstract::An aerobic, Gram-stain-negative, oxidase- and catalase-positive, non-motile, non-spore-forming, rod-shaped, pink-pigmented bacterium, designated strain R49T, was isolated from soil. Flexirubin-type pigments were absent. Phylogenetic analysis based on its 16S rRNA gene sequence revealed that strain R49T formed a lineag...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000714

    authors: Dahal RH,Kim J

    更新日期:2016-01-01 00:00:00

  • Rivicola pingtungensis gen. nov., sp. nov., a new member of the family Neisseriaceae isolated from a freshwater river.

    abstract::A bacterial strain, designated Npb-03(T), was isolated from a freshwater river in Taiwan and was characterized using a polyphasic taxonomic approach. The cells were Gram-reaction-negative, straight rod-shaped, non-motile, non-spore-forming and facultatively anaerobic. Growth occurred at 10-37 °C (optimum, 30-35 °C), a...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.055285-0

    authors: Sheu SY,Chen JC,Young CC,Chen WM

    更新日期:2014-06-01 00:00:00

  • Enterobacter oryzae sp. nov., a nitrogen-fixing bacterium isolated from the wild rice species Oryza latifolia.

    abstract::Twelve facultatively anaerobic, endophytic diazotrophs were isolated from surface-sterilized roots of the wild rice species Oryza latifolia and characterized by phenotypic and molecular methods. Six isolates were grouped together as group A by phenotypic characters, and this grouping was confirmed by SDS-PAGE whole-ce...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65484-0

    authors: Peng G,Zhang W,Luo H,Xie H,Lai W,Tan Z

    更新日期:2009-07-01 00:00:00

  • Devosia marina sp. nov., isolated from deep seawater of the South China Sea, and reclassification of Devosia subaequoris as a later heterotypic synonym of Devosia soli.

    abstract::A Gram-stain-negative, aerobic, rod-shaped and motile bacterial strain, designated L53-10-65T, was isolated from deep seawater of the South China Sea. Strain L53-10-65T was found to grow at 4-41 °C (optimum, 28 °C), at pH 5.0-9.0 (pH 7.0-8.0) and in 0-7 % (w/v) NaCl (2 %). Phylogenetic analysis based on 16S rRNA gene ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004130

    authors: Liu Y,Du J,Zhang J,Lai Q,Shao Z,Zhu H

    更新日期:2020-05-01 00:00:00

  • Halorubrum lipolyticum sp. nov. and Halorubrum aidingense sp. nov., isolated from two salt lakes in Xin-Jiang, China.

    abstract::Two extremely halophilic archaea, strains 9-3(T) and 31-hong(T), were isolated from Aibi salt lake and Aiding salt lake in Xin-Jiang, China. Their morphology, physiology, biochemical features, polar lipid compositions and 16S rRNA gene sequences were characterized in order to elucidate their taxonomic status. The resu...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64305-0

    authors: Cui HL,Tohty D,Zhou PJ,Liu SJ

    更新日期:2006-07-01 00:00:00

  • Toxopsis calypsus gen. nov., sp. nov. (Cyanobacteria, Nostocales) from cave 'Francthi', Peloponnese, Greece: a morphological and molecular evaluation.

    abstract::Representatives of a new cyanobacterial genus, Toxopsis Lamprinou & Pantazidou gen. nov., were found in fresh material from Cave 'Francthi' (Peloponnese, Greece) and isolated in cultures. Ecological data relating to the environmental parameters of the sampling sites are provided, such as the photosynthetically active ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.038679-0

    authors: Lamprinou V,Skaraki K,Kotoulas G,Economou-Amilli A,Pantazidou A

    更新日期:2012-12-01 00:00:00

  • Pseudogulbenkiania subflava gen. nov., sp. nov., isolated from a cold spring.

    abstract::A yellow-coloured bacterial strain, designated BP-5(T), was isolated from a water sample of a cold spring located in the Hsinchu area of northern Taiwan. Cells of the strain were Gram-negative, non-spore-forming rods with a polar flagellum. The isolate was able to grow at 15-42 degrees C, 0-1 % NaCl and pH 6-8. The pr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65755-0

    authors: Lin MC,Chou JH,Arun AB,Young CC,Chen WM

    更新日期:2008-10-01 00:00:00

  • Schlesneria paludicola gen. nov., sp. nov., the first acidophilic member of the order Planctomycetales, from Sphagnum-dominated boreal wetlands.

    abstract::Three strains of budding, ellipsoid-shaped and rosette-forming bacteria were isolated from acidic Sphagnum-dominated boreal wetlands of northern Russia and were designated strains MPL7T, MOB77 and SB2. The presence of crateriform pits and numerous fibrillar appendages on the cell surface and an unusual spur-like proje...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65157-0

    authors: Kulichevskaya IS,Ivanova AO,Belova SE,Baulina OI,Bodelier PLE,Rijpstra WIC,Sinninghe Damsté JS,Zavarzin GA,Dedysh SN

    更新日期:2007-11-01 00:00:00

  • Nonomuraea antimicrobica sp. nov., an endophytic actinomycete isolated from a leaf of Maytenus austroyunnanensis.

    abstract::A novel actinomycete strain, designated YIM 61105(T), was isolated from a leaf of Maytenus austroyunnanensis from the tropical rainforest in Xishuangbanna, Yunnan Province, south-west China. A 16S rRNA gene sequence analysis revealed that the organism belonged to the phylogenetic cluster of the genus Nonomuraea and wa...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.010660-0

    authors: Qin S,Zhao GZ,Klenk HP,Li J,Zhu WY,Xu LH,Li WJ

    更新日期:2009-11-01 00:00:00

  • Bryobacter aggregatus gen. nov., sp. nov., a peat-inhabiting, aerobic chemo-organotroph from subdivision 3 of the Acidobacteria.

    abstract::Bryobacter aggregatus gen. nov., sp. nov. is proposed to accommodate three strains of slowly growing, chemo-organotrophic bacteria isolated from acidic Sphagnum peat bogs. These bacteria were strictly aerobic, Gram-negative, colourless, non-motile coccoids or short rods that multiplied by normal cell division and form...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.013250-0

    authors: Kulichevskaya IS,Suzina NE,Liesack W,Dedysh SN

    更新日期:2010-02-01 00:00:00