Folding outer membrane proteins independently of the β-barrel assembly machinery: an assembly pathway for multimeric complexes?

Abstract:

:Since the discovery of the essential role of the β-barrel assembly machinery (BAM) for the membrane insertion of outer membrane proteins (OMPs) that are unrelated in sequence, members of this universally conserved family dominate discussions on OMP assembly in bacteria, mitochondria and chloroplasts. However, several multimeric bacterial OMPs assemble independently of the catalyzing BAM-component BamA. Recent progress on this alternative pathway is reviewed here, and a model for BAM-independent assembly for multimeric OMPs is proposed in which monomer delivery to the membrane and stable prepore formation are key steps towards productive membrane insertion.

journal_name

Biochem Soc Trans

authors

Huysmans GH

doi

10.1042/BST20160003

subject

Has Abstract

pub_date

2016-06-15 00:00:00

pages

845-50

issue

3

eissn

0300-5127

issn

1470-8752

pii

BST20160003

journal_volume

44

pub_type

杂志文章,评审
  • ATM (ataxia telangiectasia mutated): expanding roles in the DNA damage response and cellular homeostasis.

    abstract::DNA damage is one of the most acute threats to cellular homeostasis and life. The cell responds to such damage by activating a vast array of responses, ranging from DNA repair to numerous signalling pathways, which temporarily slow down the cellular life cycle while the damage is being repaired. Sophisticated relays c...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/0300-5127:0290661

    authors: Shiloh Y

    更新日期:2001-11-01 00:00:00

  • The kinase triad, AMPK, mTORC1 and ULK1, maintains energy and nutrient homoeostasis.

    abstract::In order for cells to divide in a proficient manner, they must first double their biomass, which is considered to be the main rate-limiting phase of cell proliferation. Cell growth requires an abundance of energy and biosynthetic precursors such as lipids and amino acids. Consequently, the energy and nutrient status o...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20130030

    authors: Dunlop EA,Tee AR

    更新日期:2013-08-01 00:00:00

  • Immunostimulatory activity of Toll-like receptor 8 agonists towards human leucocytes: basic mechanisms and translational opportunities.

    abstract::TLR8 (Toll-like receptor 8) is activated by ssRNAs (single-stranded RNAs) and synthetic imidazoquinoline compounds that resemble purines and have immunostimulatory activity. TLR8 agonists are particularly effective at inducing Th1-polarizing responses from human monocytes and myeloid dendritic cells, with the magnitud...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0351485

    authors: Philbin VJ,Levy O

    更新日期:2007-12-01 00:00:00

  • Characterizing diverse orthologues of the cystic fibrosis transmembrane conductance regulator protein for structural studies.

    abstract::As an ion channel, the cystic fibrosis transmembrane conductance regulator (CFTR) protein occupies a unique niche within the ABC family. Orthologues of CFTR are extant throughout the animal kingdom from sharks to platypods to sheep, where the osmoregulatory function of the protein has been applied to differing lifesty...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20150081

    authors: Pollock NL,Rimington TL,Ford RC

    更新日期:2015-10-01 00:00:00

  • Thymosin beta4 induces epicardium-derived neovascularization in the adult heart.

    abstract::The inability of the human heart to effectively repair itself after acute ischaemic injury has driven the search for efficacious means of promoting cardiac regenerative growth. Central to this has been the emergence of cell-based strategies to stimulate and augment both myocardial regeneration and neovascularization. ...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST0371218

    authors: Riley PR,Smart N

    更新日期:2009-12-01 00:00:00

  • Hierarchical assembly of cell-matrix adhesion complexes.

    abstract::The adhesion of cells to the extracellular matrix is a dynamic process, mediated by a series of cell-surface and matrix-associated molecules that interact with each other in a spatially and temporally regulated manner. These interactions play a major role in tissue formation, cellular migration and the induction of ad...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0320416

    authors: Zaidel-Bar R,Cohen M,Addadi L,Geiger B

    更新日期:2004-06-01 00:00:00

  • Latherin and other biocompatible surfactant proteins.

    abstract::Horses and other equids are unusual in producing protein-rich sweat for thermoregulation, a major component of which is latherin, a highly surface-active, non-glycosylated protein that is a member of the PLUNC (palate, lung and nasal epithelium clone) family. Latherin produces a significant reduction in water surface ...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST0391017

    authors: Kennedy MW

    更新日期:2011-08-01 00:00:00

  • Sterol trafficking between the endoplasmic reticulum and plasma membrane in yeast.

    abstract::We recently showed that transport of ergosterol from the ER (endoplasmic reticulum) to the sterol-enriched PM (plasma membrane) in yeast occurs by a non-vesicular (Sec18p-independent) mechanism that results in the equilibration of sterol pools in the two organelles [Baumann, Sullivan, Ohvo-Rekilä, Simonot, Pottekat, K...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0340356

    authors: Sullivan DP,Ohvo-Rekilä H,Baumann NA,Beh CT,Menon AK

    更新日期:2006-06-01 00:00:00

  • Electrocatalytic reduction of nitrate and selenate by NapAB.

    abstract::Bacterial cellular metabolism is renowned for its metabolic diversity and adaptability. However, certain environments present particular challenges. Aerobic metabolism of highly reduced carbon substrates by soil bacteria such as Paracoccus pantotrophus presents one such challenge since it may result in excessive elect...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST0390236

    authors: Gates AJ,Butler CS,Richardson DJ,Butt JN

    更新日期:2011-01-01 00:00:00

  • Regulation of Cdc45 in the cell cycle and after DNA damage.

    abstract::The Cdc (cell division cycle) 45 protein has a central role in the regulation of the initiation and elongation stages of eukaryotic chromosomal DNA replication. In addition, it is the main target for a Chk1 (checkpoint kinase 1)-dependent Cdc25/CDK2 (cyclin-dependent kinase 2)-independent DNA damage checkpoint signal ...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0370926

    authors: Broderick R,Nasheuer HP

    更新日期:2009-08-01 00:00:00

  • Cytoplasmic tail of IL-13Ralpha2 regulates IL-4 signal transduction.

    abstract::IL (interleukin)-4 and IL-13 are key cytokines in the pathogenesis of allergic inflammatory disease. IL-4 and IL-13 share many functional properties as a result of their utilization of a common receptor complex comprising IL-13Ralpha1 (IL-13 receptor alpha-chain 1) and IL-4Ralpha. The second IL-13R (IL-13 receptor) ha...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0370873

    authors: Andrews AL,Nordgren IK,Kirby I,Holloway JW,Holgate ST,Davies DE,Tavassoli A

    更新日期:2009-08-01 00:00:00

  • Reversibility of functional deficits in experimental models of Rett syndrome.

    abstract::Mutations in the X-linked MECP2 gene are the primary cause of the severe autism spectrum disorder RTT (Rett syndrome). Deletion of Mecp2 in mice recapitulates many of the overt neurological features seen in humans, and the delayed onset of symptoms is accompanied by deficits in neuronal morphology and synaptic physiol...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0380498

    authors: Cobb S,Guy J,Bird A

    更新日期:2010-04-01 00:00:00

  • The methyl-CpG-binding protein MeCP2 and neurological disease.

    abstract::The methyl-CpG-binding protein MeCP2 was discovered over 15 years ago as part of a search for proteins that selectively bind methylated DNA. It is a nuclear protein that is largely chromatin-bound and has a strong preference for binding to methylated DNA sequences in vivo. Evidence from model systems shows that MeCP2 ...

    journal_title:Biochemical Society transactions

    pub_type:

    doi:10.1042/BST0360575

    authors: Bird A

    更新日期:2008-08-01 00:00:00

  • Pi sensing and signalling: from prokaryotic to eukaryotic cells.

    abstract::Phosphorus is one of the most important macronutrients and is indispensable for all organisms as a critical structural component as well as participating in intracellular signalling and energy metabolism. Sensing and signalling of phosphate (Pi) has been extensively studied and is well understood in single-cellular or...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20160026

    authors: Qi W,Baldwin SA,Muench SP,Baker A

    更新日期:2016-06-15 00:00:00

  • Recent advances in the structural molecular biology of Ets transcription factors: interactions, interfaces and inhibition.

    abstract::The Ets family of eukaryotic transcription factors is based around the conserved Ets DNA-binding domain. Although their DNA-binding selectivity is biochemically and structurally well characterized, structures of homodimeric and ternary complexes point to Ets domains functioning as versatile protein-interaction modules...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20130227

    authors: Cooper CD,Newman JA,Gileadi O

    更新日期:2014-02-01 00:00:00

  • Twins studies as a model for studies on the interaction between smoking and genetic factors in the development of chronic bronchitis.

    abstract::Smoking is the main risk factor for COPD (chronic obstructive pulmonary disease) but genetic factors are of importance, since only a subset of smokers develops the disease. Sex differences have been suggested both in disease prevalence and response to environmental exposures. Furthermore, it has been shown that acquis...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0370814

    authors: Svartengren M,Engström G,Anderson M,Hallberg J,Edula G,de Verdier MG,Dahlbäck M,Lindberg CM,Forsman-Semb K,Nihlén U,Fehniger TE

    更新日期:2009-08-01 00:00:00

  • Single amino acid exchanges in FAD-binding domains of squalene epoxidase of Saccharomyces cerevisiae lead to either loss of functionality or terbinafine sensitivity.

    abstract::Squalene epoxidase (Erg1p) is an essential enzyme in the ergosterol biosynthesis pathway in yeast. For its enzymatic activity, Erg1p requires molecular oxygen, NAD(P)H and FAD. Amino acid analysis and sequence alignment with other squalene epoxidases revealed two highly conserved FAD-binding domains, FAD I and FAD II....

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST20051197

    authors: Ruckenstuhl C,Eidenberger A,Lang S,Turnowsky F

    更新日期:2005-11-01 00:00:00

  • Understanding the yeast host cell response to recombinant membrane protein production.

    abstract::Membrane proteins are drug targets for a wide range of diseases. Having access to appropriate samples for further research underpins the pharmaceutical industry's strategy for developing new drugs. This is typically achieved by synthesizing a protein of interest in host cells that can be cultured on a large scale, all...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST0390719

    authors: Bawa Z,Bland CE,Bonander N,Bora N,Cartwright SP,Clare M,Conner MT,Darby RA,Dilworth MV,Holmes WJ,Jamshad M,Routledge SJ,Gross SR,Bill RM

    更新日期:2011-06-01 00:00:00

  • The emerging complexity of protein ubiquitination.

    abstract::Protein ubiquitination and protein phosphorylation are two fundamental regulatory post-translational modifications controlling intracellular signalling events. However, the ubiquitin system is vastly more complex compared with phosphorylation. This is due to the ability of ubiquitin to form polymers, i.e. ubiquitin ch...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0370937

    authors: Komander D

    更新日期:2009-10-01 00:00:00

  • Model-based evolutionary analysis: the natural history of phage-shock stress response.

    abstract::The evolution of proteins is inseparably linked to their function. Because most biological processes involve a number of different proteins, it may become impossible to study the evolutionary properties of proteins in isolation. In the present article, we show how simple mechanistic models of biological processes can ...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST0370762

    authors: Huvet M,Toni T,Tan H,Jovanovic G,Engl C,Buck M,Stumpf MP

    更新日期:2009-08-01 00:00:00

  • The Golgi ribbon: mechanisms of maintenance and disassembly during the cell cycle.

    abstract::The Golgi complex (GC) has an essential role in the processing and sorting of proteins and lipids. The GC of mammalian cells is composed of stacks of cisternae connected by membranous tubules to create a continuous network, the Golgi ribbon, whose maintenance requires several core and accessory proteins. Despite this ...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20190646

    authors: Ayala I,Mascanzoni F,Colanzi A

    更新日期:2020-02-28 00:00:00

  • Mass spectrometry approaches for vitamin E research.

    abstract::Vitamin E is an important nutrient with antioxidant and non-antioxidant functions, and certain evidence suggests that it has a cardiovascular protective role. It is therefore important to maintain an optimal vitamin E status. In the present paper, a number of MS applications to monitor vitamin E status and its interac...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST0361066

    authors: Lodge JK

    更新日期:2008-10-01 00:00:00

  • PI3K/Akt-mediated regulation of p53 in cancer.

    abstract::Mutations activating the PI3K (phosphoinositide 3-kinase)/Akt signalling pathway and inactivating the TP53 tumour-suppressor gene are common mechanisms that cancer cells require to proliferate and escape pre-programmed cell death. In a well-described mechanism, Akt mediates negative control of p53 levels through enhan...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20140070

    authors: Abraham AG,O'Neill E

    更新日期:2014-08-01 00:00:00

  • Studies of focal adhesion assembly.

    abstract::Recent studies of some proteins involved in the formation of focal adhesions are described. These include fibronectin, integrins, talin, Dok1 and filamin. Emphasis is placed on features that facilitate regulated assembly of complexes; these include a modular construction and flexible regions that provide interaction s...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0360263

    authors: Campbell ID

    更新日期:2008-04-01 00:00:00

  • TRP channels activated by extracellular hypo-osmoticity in epithelia.

    abstract::TRP (transient receptor potential) channels comprise a superfamily of non-selective cation channels with at least seven subfamilies. The variety of subfamilies corresponds to the differences in the activation mechanisms and functions. TRPM3 (TRP melastatin 3) and TRPV4 (TRP vanilloid 3) have been characterized as cati...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0350091

    authors: Harteneck C,Reiter B

    更新日期:2007-02-01 00:00:00

  • Electrodes modified with lipid membranes to study quinone oxidoreductases.

    abstract::Quinone oxidoreductases are a class of membrane enzymes that catalyse the oxidation or reduction of membrane-bound quinols/quinones. The conversion of quinone/quinol by these enzymes is difficult to study because of the hydrophobic nature of the enzymes and their substrates. We describe some biochemical properties of ...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0370707

    authors: Weiss SA,Jeuken LJ

    更新日期:2009-08-01 00:00:00

  • RNA pseudoknots and the regulation of protein synthesis.

    abstract::RNA pseudoknots are structural elements found in almost all classes of RNA. Pseudoknots form when a single-stranded region in the loop of a hairpin base-pairs with a stretch of complementary nucleotides elsewhere in the RNA chain. This simple folding strategy is capable of generating a large number of stable three-dim...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0360684

    authors: Brierley I,Gilbert RJ,Pennell S

    更新日期:2008-08-01 00:00:00

  • Cellular consequences of inositol depletion.

    abstract::The inositol-depletion hypothesis was suggested to explain the therapeutic mechanism of mood-stabilizing drugs. Focus was previously on the phosphatidylinositol signalling pathway and on the regulatory roles of Ins(3,4,5)P(3) and DAG (diacylglycerol). Recent findings indicate that inositol and inositol-containing mole...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0371099

    authors: Deranieh RM,Greenberg ML

    更新日期:2009-10-01 00:00:00

  • Role of class II phosphoinositide 3-kinase in cell signalling.

    abstract::Although it is now well established that PI3K (phosphoinositide 3-kinase) is a key enzyme in several intracellular processes, there are still relatively few reports that precisely identify the specific isoforms of PI3K actually involved in such events. The lack of specific inhibitors has made it particularly difficult...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0350211

    authors: Falasca M,Maffucci T

    更新日期:2007-04-01 00:00:00

  • Tuning T helper cell differentiation by ITK.

    abstract::CD4+ effector T cells effectuate T cell immune responses, producing cytokines to orchestrate the nature and type of immune responses. The non-receptor tyrosine kinase IL-2 inducible T cell kinase (ITK), a mediator of T cell Receptor signaling, plays a critical role in tuning the development of these effector cells. In...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20190486

    authors: Elmore JP,McGee MC,Nidetz NF,Anannya O,Huang W,August A

    更新日期:2020-02-28 00:00:00