The Molecular Recognition Paradigm of Environmental Chemicals with Biomacromolecules.

Abstract:

:The interactions of ligands with biomacromolecules play a fundamental role in almost all bioprocesses occuring in living organisms. The binding of ligands can cause the conformational changes of biomacromolecules, possibly affecting their physiological functions. The interactions of ligands with biomacromolecules are thus becoming a research hotspot. However, till now, there still lacks a systematic compilation of review with the focus on the interactions between environmental chemicals and biomacromolecules. In this review, we focus on the molecular recognition paradigm of environmental chemicals with biomacromolecules and chemical basis for driving the complex formation. The state-of-the-art review on in vitro and in silico studies on interaction of organic chemicals with transport proteins, nuclear receptors and CYP450 enzymes was provided, and the enantioselective interactions of chiral environmental chemicals was also mentioned.

journal_name

Curr Protein Pept Sci

authors

Zhang W,Pan L,Wang H,Lv X,Ding K

doi

10.2174/1389203717666160421152301

subject

Has Abstract

pub_date

2017-01-01 00:00:00

pages

41-47

issue

1

eissn

1389-2037

issn

1875-5550

pii

CPPS-EPUB-75128

journal_volume

18

pub_type

杂志文章,评审
  • Disorder in Milk Proteins: Formation, Structure, Function, Isolation and Applications of Casein Phosphopeptides.

    abstract::This article is a continuation of a series of reviews on the presence and the role of intrinsic disorder in milk proteins in the journal of Current Protein and Peptide Science. The focus of this article is on casein phosphopeptides, which are liberated during digestion of the milk protein casein. Structurally these ph...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203717666151201191658

    authors: Naqvi MA,Irani KA,Katanishooshtari M,Rousseau D

    更新日期:2016-01-01 00:00:00

  • Solution NMR study of the transmembrane domain of single-span membrane proteins: opportunities and strategies.

    abstract::Membrane proteins play important roles in signal transduction across the cell membrane. Structural information for the membrane proteins is still limited due to many technical challenges. Membrane proteins containing a single α- helical transmembrane (TM) domain are very important in several pathways. Solution NMR spe...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/138920312803582979

    authors: Gayen S,Li Q,Kang C

    更新日期:2012-09-01 00:00:00

  • Serine proteinase inhibitors in the skin: role in homeostasis and disease.

    abstract::Serine proteinases fulfill and facilitate a broad spectrum of biological processes. They are held in check by different specific inhibitors. This delicate balance can be disturbed by genetic defects or exogenous influences and has been shown as the underlying or promoting cause for a large number of different diseases...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203054065374

    authors: Mägert HJ,Drögemüller K,Raghunath M

    更新日期:2005-06-01 00:00:00

  • Regulation of photosynthetic electron transport and photoinhibition.

    abstract::Photosynthetic organisms and isolated photosystems are of interest for technical applications. In nature, photosynthetic electron transport has to work efficiently in contrasting environments such as shade and full sunlight at noon. Photosynthetic electron transport is regulated on many levels, starting with the energ...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203715666140327105143

    authors: Roach T,Krieger-Liszkay A

    更新日期:2014-01-01 00:00:00

  • Progress in Research on Brain Development and Function of Mice During Weaning.

    abstract::Lactation is a critical phase for brain function development. New dietary experiences of mouse caused by weaning can regulate brain development and function, increase their response to food and environment, and eventually give rise to corresponding behavioral changes. Changes in weaning time induce the alteration of b...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203720666190125095819

    authors: Zhang W,Zhang Y,Zheng Y,Zheng M,Sun N,Yang X,Gao Y

    更新日期:2019-01-01 00:00:00

  • Discovery of new therapeutic targets by the informational spectrum method.

    abstract::The field of bioinformatics has become a major part of the drug discovery pipeline playing a key role in improvement and acceleration of this time and money consuming process. Here we review the application of the informational spectrum method (ISM), a virtual spectroscopy method for structure/function analysis of pro...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/138920308785915245

    authors: Veljkovic N,Glisic S,Prljic J,Perovic V,Botta M,Veljkovic V

    更新日期:2008-10-01 00:00:00

  • Interaction of flavonoids with serum albumin: A review.

    abstract::Flavonoids are plant products abundant in every day diet and claimed to be beneficial for human health. After absorption, flavonoids are transported by the serum albumin (SA), the most abundant carrier blood protein, through formation of flavonoids-SA complex. This review deals with the current state of knowledge on f...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章

    doi:10.2174/1389203721666201109112220

    authors: Xue P,Zhang G,Zhang J,Ren L

    更新日期:2020-11-08 00:00:00

  • Cell Cycle Arrest as a Therapeutic Target of Acute Kidney Injury.

    abstract::The current lack of complete understanding of the pathogenesis of acute kidney injury (AKI) is a significant barrier to its early diagnosis and treatment. Cell cycle arrest plays an important role in the protection of renal tubular epithelial cells and maladaptive repair following AKI. G1 phase cell arrest serves as a...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203717666160915162238

    authors: Wang WG,Sun WX,Gao BS,Lian X,Zhou HL

    更新日期:2017-01-01 00:00:00

  • Revisiting proteus: do minor changes in lectin structure matter in biological activity? Lessons from and potential biotechnological uses of the Diocleinae subtribe lectins.

    abstract::Significant differences in function have been observed among lectins structurally similar to concanavalin A, but their high homology with this widely used lectin has kept them in obscurity. The observation of large differences in the potency of many of these Diocleinae lectins as stimulators of Interferon-g production...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203013381152

    authors: Cavada BS,Barbosa T,Arruda S,Grangeiro TB,Barral-Netto M

    更新日期:2001-06-01 00:00:00

  • Polyproline and triple helix motifs in host-pathogen recognition.

    abstract::Secondary structure elements often mediate protein-protein interactions. Despite their low abundance in folded proteins, polyproline II (PPII) and its variant, the triple helix, are frequently involved in protein-protein interactions, likely due to their peculiar propensity to be solvent-exposed. We here review the ro...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/138920312804871157

    authors: Berisio R,Vitagliano L

    更新日期:2012-12-01 00:00:00

  • Comparing the molecular pharmacology of CGRP and adrenomedullin.

    abstract::CGRP and adrenomedullin [AM] are peptides that have a number of physiological effects, including vasodilation, through the activation of a shared GPCR, the family B calcitonin receptor-like receptor [CLR]. Specificity to each ligand is conferred through the unusual association of CLR with a single transmembrane access...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/13892037113149990053

    authors: Woolley MJ,Conner AC

    更新日期:2013-08-01 00:00:00

  • Direct and indirect antimicrobial activities of neuropeptides and their therapeutic potential.

    abstract::As global resistance to conventional antibiotics rises we need to develop new strategies to develop future novel therapeutics. In our quest to design novel anti-infectives and antimicrobials it is of interest to investigate host-pathogen interactions and learn from the complexity of host defense strategies that have e...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/138920312804871139

    authors: Augustyniak D,Nowak J,Lundy FT

    更新日期:2012-12-01 00:00:00

  • From interactions of single transmembrane helices to folding of alpha-helical membrane proteins: analyzing transmembrane helix-helix interactions in bacteria.

    abstract::Despite a wide variety of biological functions, alpha-helical membrane proteins display a rather simple transmembrane architecture. Although not many high resolution structures of transmembrane proteins are available today, our understanding of membrane protein folding has emerged in the recent years. Now we begin to ...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/138920307779941578

    authors: Schneider D,Finger C,Prodöhl A,Volkmer T

    更新日期:2007-02-01 00:00:00

  • Roles of Biogenic Amines in Intestinal Signaling.

    abstract::Biogenic amines in the gastrointestinal tract are important metabolites of dietary protein and amino acids with the help of gut digestive enzymes and microbes, which play a crucial role in the regulation of intestinal functions, including digestion, absorption, and local immunity. However, high concentrations of bioge...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203717666160627073048

    authors: Fan P,Song P,Li L,Huang C,Chen J,Yang W,Qiao S,Wu G,Zhang G,Ma X

    更新日期:2017-01-01 00:00:00

  • A conventional an 2DCOS infrared approach to the kinetics of protein misfolding.

    abstract::Cell viability depends on the correct folding of the proteins involved in metabolism. Proteins are synthesized on the endoplasmic reticulum and must follow a pathway to a correct, metastable, tridimensional structure. Changes in structure or in environmental conditions can drive an instability of the folding condition...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/138920311795860142

    authors: de la Arada I,Andraka N,Pacios MG,Arrondo JL

    更新日期:2011-05-01 00:00:00

  • The retinal cGMP phosphodiesterase gamma-subunit - a chameleon.

    abstract::Intrinsically disordered proteins (IDPs) represent an emerging class of proteins (or domains) that are characterized by a lack of ordered secondary and tertiary structure. This group of proteins has recently attracted tremendous interest primarily because of a unique feature: they can bind to different targets due to ...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/138920308786733930

    authors: Guo LW,Ruoho AE

    更新日期:2008-12-01 00:00:00

  • Toll-like receptors: sensor molecules for detecting damage to the nervous system.

    abstract::Toll-like receptors (TLRs) are type I transmembrane signaling molecules that are expressed in cells of the innate immune system. In these cells, TLRs function as pattern recognition receptors (PRR) that recognize specific molecular patterns derived from microorganisms. Upon activation, TLRs trigger a cascade of intrac...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203711314010006

    authors: Lee H,Lee S,Cho IH,Lee SJ

    更新日期:2013-02-01 00:00:00

  • The nature of enzymes involved in uracil-DNA repair: isoform characteristics of proteins responsible for nuclear and mitochondrial genomic integrity.

    abstract::The absence of uracil from DNA genomes is a consequence of enzyme functions that eliminate intracellular dUTP pools and that purposefully recognize and remove uracil moieties from DNA. These enzymatic functions are dUTP nucleotidohydrolase (dUTPase) and uracil-DNA glycosylase (UDG), respectively. There are distinct nu...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203013381044

    authors: Caradonna S,Muller-Weeks S

    更新日期:2001-12-01 00:00:00

  • Predicting the melting point of human C-type lysozyme mutants.

    abstract::A complete understanding of the relationships between protein structure and stability remains an open problem. Much of our insight comes from laborious experimental analyses that perturb structure via directed mutation. The glycolytic enzyme lysozyme is among the most well characterized proteins under this paradigm, d...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章

    doi:10.2174/138920310794109210

    authors: Verma D,Jacobs DJ,Livesay DR

    更新日期:2010-11-01 00:00:00

  • Biological significance of polymorphism in legume protease inhibitors from the Bowman-Birk family.

    abstract::Naturally occurring protease inhibitors (PI) of the Bowman-Birk type constitute a major PI family in cereal and legume seeds. The family name is derived from the names of the two investigators who characterised the first inhibitor of this type, the Bowman-Birk inhibitor from soybean (BBI). These proteins have the capa...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/138920306777452349

    authors: Clementea A,Domoney C

    更新日期:2006-06-01 00:00:00

  • The archaeal Sac10b protein family: conserved proteins with divergent functions.

    abstract::Here we review the present state of structural and functional studies of the Sac10b protein family, a class of highly conserved 10 kDa nucleic acid-binding proteins in archaea. Based on biochemical and structural studies, these proteins were originally assigned a role in the structural organization of chromatin; Sac10...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/138920312800785067

    authors: Xuan J,Feng Y

    更新日期:2012-05-01 00:00:00

  • Sunflower trypsin inhibitor-1.

    abstract::SFTI-1 is a bicyclic 14 amino acid peptide that was originally isolated from the seeds of the sunflower Helianthus annuus. It is a potent inhibitor of trypsin, with a sub-nanomolar K(i) value and is homologous to the active site region of the well-known family of serine protease inhibitors known as the Bowman-Birk try...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203043379594

    authors: Korsinczky ML,Schirra HJ,Craik DJ

    更新日期:2004-10-01 00:00:00

  • Structural biology of the cell adhesion protein CD2: from molecular recognition to protein folding and design.

    abstract::CD2 (cluster of differentiation 2) is a cell adhesion molecule expressed on T cells and is recognized as a target for CD48 (rats) and CD58 (humans). Tremendous progress has been achieved in understanding the function of CD2, the mechanism of molecular recognition and protein folding, thus, leading towards the use of t...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203033487063

    authors: Wilkins AL,Yang W,Yang JJ

    更新日期:2003-10-01 00:00:00

  • Perspectives in Allergen-Specific Immunotherapy: Molecular Evolution of Peptide- and Protein-Based Strategies.

    abstract::Allergen-specific Immunotherapy (AIT), through repetitive subcutaneous or sublingual administrations of allergen extracts, represents up to now the unique treatment against allergic sensitizations. However, the clinical efficacy of AIT can be largely dependent on the quality of natural allergen extracts. Moreover, the...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203720666190718152534

    authors: Jacquet A

    更新日期:2020-01-01 00:00:00

  • Recent Progress in the Therapeutic Role of Serelaxin in Vascular Dysfunction.

    abstract::Cardiovascular (CV) diseases are caused by vascular dysfunction. The enhanced sensitivity to vasoconstrictors, reduced endothelium-derived vasodilators nitric oxide (NO) and prostacyclin (PGI2), and endothelium-derived hyperpolarization (EDH) indicate CV dysfunction. In recent years, recombinant human relaxin, known a...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203719666180709103020

    authors: Murtaza G,Siddiqui A,Hussain I

    更新日期:2018-01-01 00:00:00

  • Structure and Function of CW Domain Containing Proteins.

    abstract::The CW domain is a zinc binding domain, composed of approximately 50- 60 amino acid residues with four conserved cysteine (C) and two to four conserved tryptophan (W) residues. The members of the superfamily of CW domain containing proteins, comprised of 12 different eukaryotic nuclear protein families, are extensivel...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203717666160125115130

    authors: Liu Y,Liu S,Zhang X,Liang X,Zahid KR,Liu K,Liu J,Deng L,Yang J,Qi C

    更新日期:2016-01-01 00:00:00

  • Cysteine Proteases Inhibitors with Immunoglobulin-Like Fold in Protozoan Parasites and their Role in Pathogenesis.

    abstract::The number of protein folds in nature is limited, thus is not surprising that proteins with the same fold are able to exert different functions. The cysteine protease inhibitors that adopt an immunoglobulin- like fold (Ig-ICPs) are inhibitors encoded in bacteria and protozoan parasites. Structural studies indicate tha...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203717666160813163837

    authors: Jimenez-Sandoval P,Lopez-Castillo LM,Trasviña-Arenas CH,Brieba LG

    更新日期:2017-01-01 00:00:00

  • The adipose tissue in farm animals: a proteomic approach.

    abstract::Adipose tissue is not only a tissue where energy is stored but is also involved in regulating several body functions such as appetite and energy expenditure via its endocrine activity. Moreover, it thereby modulates complex processes like reproduction, inflammation and immune response. The products secreted from adipo...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203715666140221123105

    authors: Sauerwein H,Bendixen E,Restelli L,Ceciliani F

    更新日期:2014-03-01 00:00:00

  • Synthetic peptides for AIDS research.

    abstract::In spite of the relevance of the results obtained through the clinical application of chemotherapeutic agents (reverse transcriptase and proteinase inhibitors) that are able to prolong the life span of affected people, acquired immunodeficiency syndrome (AIDS) remains a serious and lethal disease. AIDS is caused by a ...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203043379729

    authors: Di Bello C,Pasquato A,Dettin M

    更新日期:2004-08-01 00:00:00

  • Structure and Function of Fbxo7/PARK15 in Parkinson's Disease.

    abstract::Fbxo7/PARK15 has well-defined roles, acting as part of a Skp1-Cul1-F box protein (SCF)- type E3 ubiquitin ligase and also having SCF-independent activities. Mutations within FBXO7 have been found to cause an early-onset Parkinson's disease, and these are found within or near to its functional domains, including its F-...

    journal_title:Current protein & peptide science

    pub_type: 杂志文章,评审

    doi:10.2174/1389203717666160311121433

    authors: Randle SJ,Laman H

    更新日期:2017-01-01 00:00:00