当前位置： SCI文献检索 > MOLECULAR PHYLOGENETICS AND EVOLUTION期刊下所有文献 > Geographic isolation drives divergence of uncorrelated genetic and song variation in the Ruddy-capped Nightingale-Thrush (Catharus frantzii; Aves: Turdidae).

Geographic isolation drives divergence of uncorrelated genetic and song variation in the Ruddy-capped Nightingale-Thrush (Catharus frantzii; Aves: Turdidae).

Abstract：

:Montane barriers influence the evolutionary history of lineages by promoting isolation of populations. The effects of these historical processes are evident in patterns of differentiation among extant populations, which are often expressed as genetic and behavioral variation between populations. We investigated the effects of geographic barriers on the evolutionary history of a Mesoamerican bird by studying patterns of genetic and vocal variation in the Ruddy-capped Nightingale-Thrush (Turdidae: Catharus frantzii), a non-migratory oscine bird that inhabits montane forests from central Mexico to Panama. We reconstructed the phylogeographic history and estimated divergence times between populations using Bayesian and maximum likelihood methods. We found strong support for the existence of four mitochondrial lineages of C. frantzii corresponding to isolated mountain ranges: Sierra Madre Oriental; Sierra Madre del Sur; the highlands of Chiapas, Guatemala, and El Salvador; and the Talamanca Cordillera. Vocal features in C. frantzii were highly variable among the four observed clades, but vocal variation and genetic variation were uncorrelated. Song variation in C. frantzii suggests that sexual selection and cultural drift could be important factors driving song differentiation in C. frantzii.

journal_name

Mol Phylogenet Evol

journal_title

Molecular phylogenetics and evolution

authors

Ortiz-Ramírez MF,Andersen MJ,Zaldívar-Riverón A,Ornelas JF,Navarro-Sigüenza AG

doi

10.1016/j.ympev.2015.08.017

subject

Has Abstract

pub_date

2016-01-01 00:00:00

pages

74-86

issue

Pt A

eissn

1055-7903

issn

1095-9513

pii

S1055-7903(15)00248-1

journal_volume

94

pub_type

杂志文章

相关文献

MOLECULAR PHYLOGENETICS AND EVOLUTION文献大全
  • Phylogenetic and biogeographic analyses of the Sino-Himalayan endemic genus Cyananthus (Campanulaceae) and implications for the evolution of its sexual system.

    abstract：:Cyananthus (Campanulaceae) is a small genus consisting of ca. 20 species endemic to the Sino-Himalayan region. Based on phylogenetic analysis using nuclear ribosomal ITS and four plastid markers (matK, rbcL, psbA-trnH and trnG-S), our results strongly support the monophyly of Cyananthus and its close relationship with...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2013.04.027

    authors： Zhou Z,Hong D,Niu Y,Li G,Nie Z,Wen J,Sun H

    更新日期：2013-09-01 00:00:00

  • The Hyalella (Crustacea: Amphipoda) species cloud of the ancient Lake Titicaca originated from multiple colonizations.

    abstract：:Ancient lakes are renowned for their exceptional diversity of endemic species. As model systems for the study of sympatric speciation, it is necessary to understand whether a given hypothesized species flock is of monophyletic or polyphyletic origin. Here, we present the first molecular characterization of the Hyalell...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2018.03.004

    authors： Adamowicz SJ,Marinone MC,Menu-Marque S,Martin JW,Allen DC,Pyle MN,De Los Ríos P,Sobel CN,Ibañez C,Pinto J,Witt JDS

    更新日期：2018-08-01 00:00:00

  • Band-cutting no more: A method for the isolation and purification of target PCR bands from multiplex PCR products using new technology.

    abstract：:A procedure for the isolation of target PCR bands from multiplex PCR products using the E-Gel iBase Power System, an E-Gel Safe Imager Real-Time Transilluminator, and E-Gel CloneWell 0.8% SYBR Safe agarose cassettes is presented. The collected isolates are suitable for direct use in sequencing reactions without need o...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2010.05.005

    authors： Gibson JF,Kelso S,Skevington JH

    更新日期：2010-09-01 00:00:00

  • Starting from Crete, a phylogenetic re-analysis of the genus Reticulitermes in the Mediterranean area.

    abstract：:Owing to its peculiar paleogeographic history, Crete island is one of the most interesting biodiversity hotspots within the Aegean area. We here analyze the lineage diversity of Cretan Reticulitermes termites obtained on mitochondrial genes (COII and 16S) and nuclear Inter-SINE loci. The evolutionary pattern here dete...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2010.04.037

    authors： Velonà A,Ghesini S,Luchetti A,Marini M,Mantovani B

    更新日期：2010-09-01 00:00:00

  • The intraspecific genetic variability of siliceous and calcareous Gentiana species is shaped by contrasting demographic and re-colonization processes.

    abstract：:The Ciminalis section of Gentiana comprises seven species, two of them growing on siliceous substrates (G. alpina and G. acaulis), the other ones being calcareous taxa (G. clusii, G. angustifolia, G. ligustica, G. occidentalis and G. dinarica). A total of 515 individuals from 183 populations over the entire Ciminalis ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2013.09.022

    authors： Christe C,Caetano S,Aeschimann D,Kropf M,Diadema K,Naciri Y

    更新日期：2014-01-01 00:00:00

  • Molecular phylogeny of hybridizing species from the genus Spartina Schreb. (Poaceae).

    abstract：:Interspecific hybridization events have been reported in the genus Spartina Schreb. (Poaceae), involving the east American species Spartina alterniflora, and including either introgression (e.g., with the western American Spartina foliosa) or allopolyploid speciation (e.g., with the Euro-African Spartina maritima). Mo...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1006/mpev.2001.1064

    authors： Baumel A,Ainouche ML,Bayer RJ,Ainouche AK,Misset MT

    更新日期：2002-02-01 00:00:00

  • Differential expansion of the merozoite surface protein (msp)-7 gene family in Plasmodium species under a birth-and-death model of evolution.

    abstract：:MSP-7 is a surface protein expressed by the Plasmodium merozoite as part of a protein-complex involved in initial interaction between merozoite and erythrocyte. Contigs of seven Plasmodium species were analyzed in order to identify all msp-7 family genes. The search identified annotated and unannotated open reading fr...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2010.02.017

    authors： Garzón-Ospina D,Cadavid LF,Patarroyo MA

    更新日期：2010-05-01 00:00:00

  • Delineating species boundaries using an iterative taxonomic approach: the case of soldierless termites (Isoptera, Termitidae, Apicotermitinae).

    abstract：:Species boundaries are traditionally inferred using morphological characters, although morphology sometimes fails to correctly delineate species. To overcome this limitation, researchers have widely taken advantage of alternative methods such as DNA barcoding or analysis of cuticular hydrocarbons (CHs) profiles, but r...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2013.07.007

    authors： Bourguignon T,Šobotník J,Hanus R,Krasulová J,Vrkoslav V,Cvačka J,Roisin Y

    更新日期：2013-12-01 00:00:00

  • Dispersing towards Madagascar: Biogeography and evolution of the Madagascan endemics of the Spermacoceae tribe (Rubiaceae).

    abstract：:Despite the close proximity of the African mainland, dispersal of plant lineages towards Madagascar remains intriguing. The composition of the Madagascan flora is rather mixed and shows besides African representatives, also floral elements of India, Southeast Asia, Australia, and the Neotropics. Due to its proportiona...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2015.10.024

    authors： Janssens SB,Groeninckx I,De Block PJ,Verstraete B,Smets EF,Dessein S

    更新日期：2016-02-01 00:00:00

  • Geographic and phylogenetic patterns in Silene section Melandrium (Caryophyllaceae) as inferred from chloroplast and nuclear DNA sequences.

    abstract：:The phylogenetic relationships between the five dioecious species in Silene section Melandrium (Caryophyllaceae) and their putative hermaphrodite relatives are investigated based on an extensive geographic and taxonomic sample, using DNA sequence data from the chloroplast genome and the nuclear ribosomal ITS region. T...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2010.08.003

    authors： Rautenberg A,Hathaway L,Oxelman B,Prentice HC

    更新日期：2010-12-01 00:00:00

  • Global phylogeny and new classification of the Rapaninae (Gastropoda: Muricidae), dominant molluscan predators on tropical rocky seashores.

    abstract：:The monophyly of the muricid subfamily Rapaninae has recently been confirmed with molecular techniques, but its composition and the relationships among its constituent genera remain unclear. We use four genes (28S rRNA, 12S rRNA, 16S rRNA and cytochrome c oxidase subunit I, COI) to construct a Bayesian phylogeny of 80...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2012.09.014

    authors： Claremont M,Vermeij GJ,Williams ST,Reid DG

    更新日期：2013-01-01 00:00:00

  • The mitochondrial genome of the onychophoran Opisthopatus cinctipes (Peripatopsidae) reflects the ancestral mitochondrial gene arrangement of Panarthropoda and Ecdysozoa.

    abstract：:The ancestral genome composition in Onychophora (velvet worms) is unknown since only a single species of Peripatidae has been studied thus far, which shows a highly derived gene order with numerous translocated genes. Due to this lack of information from Onychophora, it is difficult to infer the ancestral mitochondria...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2010.05.011

    authors： Braband A,Cameron SL,Podsiadlowski L,Daniels SR,Mayer G

    更新日期：2010-10-01 00:00:00

  • Evolutionary rates of and selective constraints on the mitochondrial genomes of Orthoptera insects with different wing types.

    abstract：:Orthoptera is the most diverse order of polyneopterans, and the forewing and hindwing of its members exhibit extremely variability from full length to complete loss in many groups; thus, this order provides a good model for studying the effects of insect flight ability on the evolutionary constraints on and evolutiona...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2020.106734

    authors： Chang H,Qiu Z,Yuan H,Wang X,Li X,Sun H,Guo X,Lu Y,Feng X,Majid M,Huang Y

    更新日期：2020-04-01 00:00:00

  • Structure and evolution of the mitochondrial genomes of Haematobia irritans and Stomoxys calcitrans: the Muscidae (Diptera: Calyptratae) perspective.

    abstract：:We present the first two mitochondrial genomes of Muscidae dipterans for the species Haematobia irritans (the horn fly) and Stomoxys calcitrans (the stable fly). Typical insect mtDNA features are described, such as a high A+T content (79.1% and 78.9%, respectively), the preference for A+T-rich codons, and the evidence...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2008.05.022

    authors： Oliveira MT,Barau JG,Junqueira AC,Feijão PC,Rosa AC,Abreu CF,Azeredo-Espin AM,Lessinger AC

    更新日期：2008-09-01 00:00:00

  • Molecular genetic aspects of tetraploidy in the common carp Cyprinus carpio.

    abstract：:Genome duplications are believed to have occurred on multiple occasions in vertebrate evolution. Studies of duplicate gene loci in tetraploid animals may reveal important general aspects of gene duplication, an important mode of gene evolution in metazoans. The common carp Cyprinus carpio has twice as many chromosomes...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1006/mpev.1994.1007

    authors： Larhammar D,Risinger C

    更新日期：1994-03-01 00:00:00

  • The evolutionary history of seahorses (Syngnathidae: Hippocampus): molecular data suggest a West Pacific origin and two invasions of the Atlantic Ocean.

    abstract：:Sequence data derived from four markers (the nuclear RP1 and Aldolase and the mitochondrial 16S rRNA and cytochrome b genes) were used to determine the phylogenetic relationships among 32 species belonging to the genus Hippocampus. There were marked differences in the rate of evolution among these gene fragments, with...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/s1055-7903(03)00214-8

    authors： Teske PR,Cherry MI,Matthee CA

    更新日期：2004-02-01 00:00:00

  • Phylogenomics of Ichneumonoidea (Hymenoptera) and implications for evolution of mode of parasitism and viral endogenization.

    abstract：:Ichneumonoidea is one of the most diverse lineages of animals on the planet with >48,000 described species and many more undescribed. Parasitoid wasps of this superfamily are mostly beneficial insects that attack and kill other arthropods and are important for understanding diversification and the evolution of life hi...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2020.107023

    authors： Sharanowski BJ,Ridenbaugh RD,Piekarski PK,Broad GR,Burke GR,Deans AR,Lemmon AR,Moriarty Lemmon EC,Diehl GJ,Whitfield JB,Hines HM

    更新日期：2021-03-01 00:00:00

  • Further insights into the phylogeny of peniculid ciliates (Ciliophora, Oligohymenophorea) based on multigene data.

    abstract：:Peniculids comprise a large order of ciliated protists in Class Oligohymenophorea having many unresolved evolutionary relationships. Herein, we report 27 new sequences, including 18S rRNA, ITS1-5.8S- ITS2 rRNA, 28S rRNA and the mitochondrial cox1 genes of eight peniculids. We conducted phylogenetic analyses based on e...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2020.107003

    authors： Sun M,Li Y,Cai X,Liu Y,Chen Y,Pan X

    更新日期：2021-01-01 00:00:00

  • Phylogeny, phylogeography, and evolution in the Mediterranean region: News from a freshwater mussel (Potomida, Unionida).

    abstract：:The Potomida genus (Bivalvia, Unionida) has a Circum-Mediterranean distribution and like other freshwater mussel species, its populations have suffered dramatic declines. Although this genus is currently considered as monotypic, it has a long history of taxonomic revisions and presently many aspects of its systematics...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2016.04.030

    authors： Froufe E,Prié V,Faria J,Ghamizi M,Gonçalves DV,Gürlek ME,Karaouzas I,Kebapçi Ü,Şereflişan H,Sobral C,Sousa R,Teixeira A,Varandas S,Zogaris S,Lopes-Lima M

    更新日期：2016-07-01 00:00:00

  • Rhodinocichla rosea is an emberizid (Aves; Passeriformes) based on mitochondrial DNA analyses.

    abstract：:The systematic position of the avian species Rhodinocichla rosea is unclear. Recent opinions are that it is either a mockingbird (family Mimidae) or a tanager (Thraupinae; Emberizidae). In either case, it would be an atypical member of the family. We sequenced approximately 600 bases of the mitochondrial cytochrome ox...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1006/mpev.1997.0426

    authors： Seutin G,Bermingham E

    更新日期：1997-10-01 00:00:00

  • In the shadows: Phylogenomics and coalescent species delimitation unveil cryptic diversity in a Cerrado endemic lizard (Squamata: Tropidurus).

    abstract：:The recognition of cryptic diversity within geographically widespread species is gradually becoming a trend in the highly speciose Neotropical biomes. The statistical methods to recognise such cryptic lineages are rapidly advancing, but have rarely been applied to genomic-scale datasets. Herein, we used phylogenomic d...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2016.12.009

    authors： Domingos FMCB,Colli GR,Lemmon A,Lemmon EM,Beheregaray LB

    更新日期：2017-02-01 00:00:00

  • Demographic history and asynchronous spawning shape genetic differentiation among populations of the hard coral Acropora tenuis in Western Australia.

    abstract：:Genetic subdivision within populations can ultimately lead to the evolution of new species, and in populations of broadcast-spawners a potential facilitator of genetic subdivision is asynchronous reproduction. However, the factors that shape genetic variation in marine systems are complex and ambiguous, and ecological...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2016.02.004

    authors： Rosser NL

    更新日期：2016-05-01 00:00:00

  • Phylogenomic inference of species and subspecies diversity in the Palearctic salamander genus Salamandra.

    abstract：:The salamander genus Salamandra is widespread across Europe, North Africa, and the Near East and is renowned for its conspicuous and polymorphic colouration and diversity of reproductive modes. The phylogenetic relationships within the genus, and especially in the highly polymorphic species S. salamandra, have been ve...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2020.107063

    authors： Burgon JD,Vences M,Steinfartz S,Bogaerts S,Bonato L,Donaire-Barroso D,Martínez-Solano I,Velo-Antón G,Vieites DR,Mable BK,Elmer KR

    更新日期：2020-12-31 00:00:00

  • A multi-gene dataset reveals a tropical New World origin and Early Miocene diversification of croakers (Perciformes: Sciaenidae).

    abstract：:Widely distributed groups of living animals, such as the predominantly marine fish family Sciaenidae, have always attracted the attention of biogeographers to document the origins and patterns of diversification in time and space. In this study, the historical biogeography of the global Sciaenidae is reconstructed wit...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2015.03.025

    authors： Lo PC,Liu SH,Chao NL,Nunoo FK,Mok HK,Chen WJ

    更新日期：2015-07-01 00:00:00

  • Beyond phylogeny: pelecaniform and ciconiiform birds, and long-term niche stability.

    abstract：:Phylogenetic trees are a starting point for the study of further evolutionary and ecological questions. We show that for avian evolutionary relationships, improved taxon sampling, longer sequences and additional data sets are giving stability to the prediction of the grouping of pelecaniforms and ciconiiforms, thus al...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2013.03.021

    authors： Gibb GC,Kennedy M,Penny D

    更新日期：2013-08-01 00:00:00

  • Molecular phylogenetics and phylogeographic structure of Sorex bedfordiae based on mitochondrial and nuclear DNA sequences.

    abstract：:The southeastern margin of the Tibetan Plateau is characterized by complex topography and a discontinuous landscape, creating a sky island situation. However, the way topography shapes genetic structures and demographic histories of endemic species has not been well studied. We examined the phylogeographic pattern and...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2014.12.016

    authors： Chen S,Sun Z,He K,Jiang X,Liu Y,Koju NP,Zhang X,Tu F,Fan Z,Liu S,Yue B

    更新日期：2015-03-01 00:00:00

  • Phylogeography of Mabuya maculilabris (Reptilia) from São Tomé Island (Gulf of Guinea) inferred from mtDNA sequences.

    abstract：:The pattern of genetic variation of the lizard Mabuya maculilabris from São Tomé Island (Gulf of Guinea) was investigated using a combination of three mitochondrial DNA gene fragments. Forty-eight haplotypes were recovered among 66 individuals covering the whole island. The genealogy inferred from the most parsimoniou...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2005.04.032

    authors： Jesus J,Harris DJ,Brehm A

    更新日期：2005-11-01 00:00:00

  • Multigenic phylogeographic divergence in the paleoendemic southern Appalachian opilionid Fumontana deprehendor Shear (Opiliones, Laniatores, Triaenonychidae).

    abstract：:The paleoendemic opilionid Fumontana deprehendor is restricted to a small area of mid-elevation forested habitats in the southern Blue Ridge province of the Appalachian Mountains. In a recent study we reported on the discovery of 22 new montane populations of this monotypic genus, specimens from which exhibit remarkab...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2007.10.013

    authors： Thomas SM,Hedin M

    更新日期：2008-02-01 00:00:00

  • Phylogeography of the bark beetle Dendroctonus mexicanus Hopkins (Coleoptera: Curculionidae: Scolytinae).

    abstract：:Dendroctonus mexicanus is polyphagous within the Pinus genus and has a wide geographical distribution in Mexico and Guatemala. We examined the pattern of genetic variation across the range of this species to explore its demographic history and its phylogeographic pattern. Analysis of the mtDNA sequences of 173 individ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2008.09.005

    authors： Anducho-Reyes MA,Cognato AI,Hayes JL,Zúñiga G

    更新日期：2008-12-01 00:00:00

  • Efficiently resolving the basal clades of a phylogenetic tree using Bayesian and parsimony approaches: a case study using mitogenomic data from 100 higher teleost fishes.

    abstract：:Many phylogenetic analyses that include numerous terminals but few genes show high resolution and branch support for relatively recently diverged clades, but lack of resolution and/or support for "basal" clades of the tree. The various benefits of increased taxon and character sampling have been widely discussed in th...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2003.08.004

    authors： Simmons MP,Miya M

    更新日期：2004-04-01 00:00:00