ATF4 licenses C/EBPβ activity in human mesenchymal stem cells primed for adipogenesis.

Abstract:

:A well-established cascade of transcription factor (TF) activity orchestrates adipogenesis in response to chemical cues, yet how cell-intrinsic determinants of differentiation such as cell shape and/or seeding density inform this transcriptional program remain enigmatic. Here, we uncover a novel mechanism licensing transcription in human mesenchymal stem cells (hMSCs) adipogenically primed by confluence. Prior to adipogenesis, confluency promotes heterodimer recruitment of the bZip TFs C/EBPβ and ATF4 to a non-canonical C/EBP DNA sequence. ATF4 depletion decreases both cell-density-dependent transcription and adipocyte differentiation. Global profiling in hMSCs and a novel cell-free assay reveals that ATF4 requires C/EBPβ for genomic binding at a motif distinct from that bound by the C/EBPβ homodimer. Our observations demonstrate that C/EBPβ bridges the transcriptional programs in naïve, confluent cells and early differentiating pre-adipocytes. Moreover, they suggest that homo- and heterodimer formation poise C/EBPβ to execute diverse and stage-specific transcriptional programs by exploiting an expanded motif repertoire.

journal_name

Elife

journal_title

eLife

authors

Cohen DM,Won KJ,Nguyen N,Lazar MA,Chen CS,Steger DJ

doi

10.7554/eLife.06821

subject

Has Abstract

pub_date

2015-06-25 00:00:00

pages

e06821

issn

2050-084X

journal_volume

4

pub_type

杂志文章

相关文献

eLife文献大全
  • Externally induced frontoparietal synchronization modulates network dynamics and enhances working memory performance.

    abstract::Cognitive functions such as working memory (WM) are emergent properties of large-scale network interactions. Synchronisation of oscillatory activity might contribute to WM by enabling the coordination of long-range processes. However, causal evidence for the way oscillatory activity shapes network dynamics and behavio...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.22001

    authors: Violante IR,Li LM,Carmichael DW,Lorenz R,Leech R,Hampshire A,Rothwell JC,Sharp DJ

    更新日期:2017-03-14 00:00:00

  • Pyphe, a python toolbox for assessing microbial growth and cell viability in high-throughput colony screens.

    abstract::Microbial fitness screens are a key technique in functional genomics. We present an all-in-one solution, pyphe, for automating and improving data analysis pipelines associated with large-scale fitness screens, including image acquisition and quantification, data normalisation, and statistical analysis. Pyphe is versat...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.55160

    authors: Kamrad S,Rodríguez-López M,Cotobal C,Correia-Melo C,Ralser M,Bähler J

    更新日期:2020-06-16 00:00:00

  • Using evolution to generate sustainable malaria control with spatial repellents.

    abstract::Evolution persistently undermines vector control programs through insecticide resistance. Here we propose a novel strategy which instead exploits evolution to generate and sustain new control tools. Effective spatial repellents are needed to keep vectors out of houses. Our approach generates such new repellents by com...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.15416

    authors: Lynch PA,Boots M

    更新日期:2016-10-25 00:00:00

  • Cryo-EM structure of VASH1-SVBP bound to microtubules.

    abstract::The dynamic tyrosination-detyrosination cycle of α-tubulin regulates microtubule functions. Perturbation of this cycle impairs mitosis, neural physiology, and cardiomyocyte contraction. The carboxypeptidases vasohibins 1 and 2 (VASH1 and VASH2), in complex with the small vasohibin-binding protein (SVBP), mediate α-tub...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.58157

    authors: Li F,Li Y,Ye X,Gao H,Shi Z,Luo X,Rice LM,Yu H

    更新日期:2020-08-10 00:00:00

  • A gene-expression screen identifies a non-toxic sumoylation inhibitor that mimics SUMO-less human LRH-1 in liver.

    abstract::SUMO-modification of nuclear proteins has profound effects on gene expression. However, non-toxic chemical tools that modulate sumoylation in cells are lacking. Here, to identify small molecule sumoylation inhibitors we developed a cell-based screen that focused on the well-sumoylated substrate, human Liver Receptor H...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.09003

    authors: Suzawa M,Miranda DA,Ramos KA,Ang KK,Faivre EJ,Wilson CG,Caboni L,Arkin MR,Kim YS,Fletterick RJ,Diaz A,Schneekloth JS,Ingraham HA

    更新日期:2015-12-11 00:00:00

  • Differential TAM receptor-ligand-phospholipid interactions delimit differential TAM bioactivities.

    abstract::The TAM receptor tyrosine kinases Tyro3, Axl, and Mer regulate key features of cellular physiology, yet the differential activities of the TAM ligands Gas6 and Protein S are poorly understood. We have used biochemical and genetic analyses to delineate the rules for TAM receptor-ligand engagement and find that the TAMs...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.03385

    authors: Lew ED,Oh J,Burrola PG,Lax I,Zagórska A,Través PG,Schlessinger J,Lemke G

    更新日期:2014-09-29 00:00:00

  • Individual recognition and the 'face inversion effect' in medaka fish (Oryzias latipes).

    abstract::Individual recognition (IR) is essential for maintaining various social interactions in a group, and face recognition is one of the most specialised cognitive abilities in IR. We used both a mating preference system and an electric shock conditioning experiment to test IR ability in medaka, and found that signals near...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.24728

    authors: Wang MY,Takeuchi H

    更新日期:2017-07-11 00:00:00

  • Ribosome biogenesis restricts innate immune responses to virus infection and DNA.

    abstract::Ribosomes are universally important in biology and their production is dysregulated by developmental disorders, cancer, and virus infection. Although presumed required for protein synthesis, how ribosome biogenesis impacts virus reproduction and cell-intrinsic immune responses remains untested. Surprisingly, we find t...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.49551

    authors: Bianco C,Mohr I

    更新日期:2019-12-16 00:00:00

  • Ribosomal profiling during prion disease uncovers progressive translational derangement in glia but not in neurons.

    abstract::Prion diseases are caused by PrPSc, a self-replicating pathologically misfolded protein that exerts toxicity predominantly in the brain. The administration of PrPSc causes a robust, reproducible and specific disease manifestation. Here, we have applied a combination of translating ribosome affinity purification and ri...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.62911

    authors: Scheckel C,Imeri M,Schwarz P,Aguzzi A

    更新日期:2020-09-22 00:00:00

  • How flies turn food into progeny.

    abstract::Sex-optimal diets have different effects on gene expression in female and male flies. ...

    journal_title:eLife

    pub_type: 评论,杂志文章

    doi:10.7554/eLife.51289

    authors: Flatt T

    更新日期:2019-10-01 00:00:00

  • Shared behavioral mechanisms underlie C. elegans aggregation and swarming.

    abstract::In complex biological systems, simple individual-level behavioral rules can give rise to emergent group-level behavior. While collective behavior has been well studied in cells and larger organisms, the mesoscopic scale is less understood, as it is unclear which sensory inputs and physical processes matter a priori. H...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.43318

    authors: Ding SS,Schumacher LJ,Javer AE,Endres RG,Brown AE

    更新日期:2019-04-25 00:00:00

  • Cryo-EM structure of a late pre-40S ribosomal subunit from Saccharomyces cerevisiae.

    abstract::Mechanistic understanding of eukaryotic ribosome formation requires a detailed structural knowledge of the numerous assembly intermediates, generated along a complex pathway. Here, we present the structure of a late pre-40S particle at 3.6 Å resolution, revealing in molecular detail how assembly factors regulate the t...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.30189

    authors: Heuer A,Thomson E,Schmidt C,Berninghausen O,Becker T,Hurt E,Beckmann R

    更新日期:2017-11-20 00:00:00

  • Comparison of induced neurons reveals slower structural and functional maturation in humans than in apes.

    abstract::We generated induced excitatory neurons (iNeurons, iNs) from chimpanzee, bonobo, and human stem cells by expressing the transcription factor neurogenin-2 (NGN2). Single-cell RNA sequencing showed that genes involved in dendrite and synapse development are expressed earlier during iNs maturation in the chimpanzee and b...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.59323

    authors: Schörnig M,Ju X,Fast L,Ebert S,Weigert A,Kanton S,Schaffer T,Nadif Kasri N,Treutlein B,Peter BM,Hevers W,Taverna E

    更新日期:2021-01-20 00:00:00

  • Shining light on spindle positioning.

    abstract::Optogenetic approaches are leading to a better understanding of the forces that determine the plane of cell division. ...

    journal_title:eLife

    pub_type: 评论,杂志文章

    doi:10.7554/eLife.38748

    authors: Serra-Marques A,Dumont S

    更新日期:2018-07-09 00:00:00

  • Adaptation in protein fitness landscapes is facilitated by indirect paths.

    abstract::The structure of fitness landscapes is critical for understanding adaptive protein evolution. Previous empirical studies on fitness landscapes were confined to either the neighborhood around the wild type sequence, involving mostly single and double mutants, or a combinatorially complete subgraph involving only two am...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.16965

    authors: Wu NC,Dai L,Olson CA,Lloyd-Smith JO,Sun R

    更新日期:2016-07-08 00:00:00

  • TAPBPR alters MHC class I peptide presentation by functioning as a peptide exchange catalyst.

    abstract::Our understanding of the antigen presentation pathway has recently been enhanced with the identification that the tapasin-related protein TAPBPR is a second major histocompatibility complex (MHC) class I-specific chaperone. We sought to determine whether, like tapasin, TAPBPR can also influence MHC class I peptide sel...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.09617

    authors: Hermann C,van Hateren A,Trautwein N,Neerincx A,Duriez PJ,Stevanović S,Trowsdale J,Deane JE,Elliott T,Boyle LH

    更新日期:2015-10-06 00:00:00

  • Transverse sinus injections drive robust whole-brain expression of transgenes.

    abstract::Convenient, efficient and fast whole-brain delivery of transgenes presents a persistent experimental challenge in neuroscience. Recent advances demonstrate whole-brain gene delivery by retro-orbital injection of virus, but slow and sparse expression and the large injection volumes required make this approach cumbersom...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.53639

    authors: Hamodi AS,Martinez Sabino A,Fitzgerald ND,Moschou D,Crair MC

    更新日期:2020-05-18 00:00:00

  • Excitatory and inhibitory synapse reorganization immediately after critical sensory experience in a vocal learner.

    abstract::Excitatory and inhibitory synapses are the brain's most abundant synapse types. However, little is known about their formation during critical periods of motor skill learning, when sensory experience defines a motor target that animals strive to imitate. In songbirds, we find that exposure to tutor song leads to elimi...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.37571

    authors: Huang Z,Khaled HG,Kirschmann M,Gobes SM,Hahnloser RH

    更新日期:2018-10-25 00:00:00

  • CHIP as a membrane-shuttling proteostasis sensor.

    abstract::Cells respond to protein misfolding and aggregation in the cytosol by adjusting gene transcription and a number of post-transcriptional processes. In parallel to functional reactions, cellular structure changes as well; however, the mechanisms underlying the early adaptation of cellular compartments to cytosolic prote...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.29388

    authors: Kopp Y,Lang WH,Schuster TB,Martínez-Limón A,Hofbauer HF,Ernst R,Calloni G,Vabulas RM

    更新日期:2017-11-01 00:00:00

  • Associations between sounds and actions in early auditory cortex of nonhuman primates.

    abstract::An individual may need to take different actions to the same stimulus in different situations to achieve a given goal. The selection of the appropriate action hinges on the previously learned associations between stimuli, actions, and outcomes in the situations. Here, using a go/no-go paradigm and a symmetrical reward...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.43281

    authors: Huang Y,Heil P,Brosch M

    更新日期:2019-04-04 00:00:00

  • The MAP kinase pathway coordinates crossover designation with disassembly of synaptonemal complex proteins during meiosis.

    abstract::Asymmetric disassembly of the synaptonemal complex (SC) is crucial for proper meiotic chromosome segregation. However, the signaling mechanisms that directly regulate this process are poorly understood. Here we show that the mammalian Rho GEF homolog, ECT-2, functions through the conserved RAS/ERK MAP kinase signaling...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.12039

    authors: Nadarajan S,Mohideen F,Tzur YB,Ferrandiz N,Crawley O,Montoya A,Faull P,Snijders AP,Cutillas PR,Jambhekar A,Blower MD,Martinez-Perez E,Harper JW,Colaiacovo MP

    更新日期:2016-02-27 00:00:00

  • Bioengineered human myobundles mimic clinical responses of skeletal muscle to drugs.

    abstract::Existing in vitro models of human skeletal muscle cannot recapitulate the organization and function of native muscle, limiting their use in physiological and pharmacological studies. Here, we demonstrate engineering of electrically and chemically responsive, contractile human muscle tissues ('myobundles') using primar...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.04885

    authors: Madden L,Juhas M,Kraus WE,Truskey GA,Bursac N

    更新日期:2015-01-09 00:00:00

  • Drosophila TRIM32 cooperates with glycolytic enzymes to promote cell growth.

    abstract::Cell growth and/or proliferation may require the reprogramming of metabolic pathways, whereby a switch from oxidative to glycolytic metabolism diverts glycolytic intermediates towards anabolic pathways. Herein, we identify a novel role for TRIM32 in the maintenance of glycolytic flux mediated by biochemical interactio...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.52358

    authors: Bawa S,Brooks DS,Neville KE,Tipping M,Sagar MA,Kollhoff JA,Chawla G,Geisbrecht BV,Tennessen JM,Eliceiri KW,Geisbrecht ER

    更新日期:2020-03-30 00:00:00

  • Spatial patterning of liver progenitor cell differentiation mediated by cellular contractility and Notch signaling.

    abstract::The progenitor cells of the developing liver can differentiate toward both hepatocyte and biliary cell fates. In addition to the established roles of TGFβ and Notch signaling in this fate specification process, there is increasing evidence that liver progenitors are sensitive to mechanical cues. Here, we utilized micr...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.38536

    authors: Kaylan KB,Berg IC,Biehl MJ,Brougham-Cook A,Jain I,Jamil SM,Sargeant LH,Cornell NJ,Raetzman LT,Underhill GH

    更新日期:2018-12-27 00:00:00

  • Presynaptic PTPσ regulates postsynaptic NMDA receptor function through direct adhesion-independent mechanisms.

    abstract::Synaptic adhesion molecules regulate synapse development and function. However, whether and how presynaptic adhesion molecules regulate postsynaptic NMDAR function remains largely unclear. Presynaptic LAR family receptor tyrosine phosphatases (LAR-RPTPs) regulate synapse development through mechanisms that include tra...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.54224

    authors: Kim K,Shin W,Kang M,Lee S,Kim D,Kang R,Jung Y,Cho Y,Yang E,Kim H,Bae YC,Kim E

    更新日期:2020-03-06 00:00:00

  • Histone H3G34R mutation causes replication stress, homologous recombination defects and genomic instability in S. pombe.

    abstract::Recurrent somatic mutations of H3F3A in aggressive pediatric high-grade gliomas generate K27M or G34R/V mutant histone H3.3. H3.3-G34R/V mutants are common in tumors with mutations in p53 and ATRX, an H3.3-specific chromatin remodeler. To gain insight into the role of H3-G34R, we generated fission yeast that express o...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.27406

    authors: Yadav RK,Jablonowski CM,Fernandez AG,Lowe BR,Henry RA,Finkelstein D,Barnum KJ,Pidoux AL,Kuo YM,Huang J,O'Connell MJ,Andrews AJ,Onar-Thomas A,Allshire RC,Partridge JF

    更新日期:2017-07-18 00:00:00

  • Coupling of remote alternating-access transport mechanisms for protons and substrates in the multidrug efflux pump AcrB.

    abstract::Membrane transporters of the RND superfamily confer multidrug resistance to pathogenic bacteria, and are essential for cholesterol metabolism and embryonic development in humans. We use high-resolution X-ray crystallography and computational methods to delineate the mechanism of the homotrimeric RND-type proton/drug a...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.03145

    authors: Eicher T,Seeger MA,Anselmi C,Zhou W,Brandstätter L,Verrey F,Diederichs K,Faraldo-Gómez JD,Pos KM

    更新日期:2014-09-19 00:00:00

  • The circuitry of sex.

    abstract::Neural circuits that control copulation in male flies have been identified. ...

    journal_title:eLife

    pub_type: 评论,杂志文章

    doi:10.7554/eLife.22215

    authors: Levine J

    更新日期:2016-11-15 00:00:00

  • Accelerated phosphatidylcholine turnover in macrophages promotes adipose tissue inflammation in obesity.

    abstract::White adipose tissue (WAT) inflammation contributes to the development of insulin resistance in obesity. While the role of adipose tissue macrophage (ATM) pro-inflammatory signalling in the development of insulin resistance has been established, it is less clear how WAT inflammation is initiated. Here, we show that AT...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.47990

    authors: Petkevicius K,Virtue S,Bidault G,Jenkins B,Çubuk C,Morgantini C,Aouadi M,Dopazo J,Serlie MJ,Koulman A,Vidal-Puig A

    更新日期:2019-08-16 00:00:00

  • A counter gradient of Activin A and follistatin instructs the timing of hair cell differentiation in the murine cochlea.

    abstract::The mammalian auditory sensory epithelium has one of the most stereotyped cellular patterns known in vertebrates. Mechano-sensory hair cells are arranged in precise rows, with one row of inner and three rows of outer hair cells spanning the length of the spiral-shaped sensory epithelium. Aiding such precise cellular p...

    journal_title:eLife

    pub_type: 杂志文章

    doi:10.7554/eLife.47613

    authors: Prajapati-DiNubila M,Benito-Gonzalez A,Golden EJ,Zhang S,Doetzlhofer A

    更新日期:2019-06-12 00:00:00