Abstract:
:The mechanism by which enzymes arose from both abiotic and biological worlds remains an unsolved natural mystery. We postulate that an enzyme can emerge from any sequence of any functional polymer under permissive evolutionary conditions. To support this premise, we have arbitrarily chosen a 50-nucleotide DNA fragment encoding for the Bos taurus (cattle) albumin mRNA and subjected it to test-tube evolution to derive a catalytic DNA (DNAzyme) with RNA-cleavage activity. After only a few weeks, a DNAzyme with significant catalytic activity has surfaced. Sequence comparison reveals that seven nucleotides are responsible for the conversion of the noncatalytic sequence into the enzyme. Deep sequencing analysis of DNA pools along the evolution trajectory has identified individual mutations as the progressive drivers of the molecular evolution. Our findings demonstrate that an enzyme can indeed arise from a sequence of a functional polymer via permissive molecular evolution, a mechanism that may have been exploited by nature for the creation of the enormous repertoire of enzymes in the biological world today.
journal_name
Sci Repjournal_title
Scientific reportsauthors
Gysbers R,Tram K,Gu J,Li Ydoi
10.1038/srep11405subject
Has Abstractpub_date
2015-06-19 00:00:00pages
11405issn
2045-2322pii
srep11405journal_volume
5pub_type
杂志文章abstract::Definitive evidence for the direct band gap predicted for Wurtzite Gallium Phosphide (WZ GaP) nanowires has remained elusive due to the lack of strong band-to-band luminescence in these materials. In order to circumvent this problem, we successfully obtained large volume WZ GaP structures grown by nanoparticle-crawlin...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-64809-4
更新日期:2020-05-13 00:00:00
abstract::Marine macroalgal forests are highly productive and iconic ecosystems, which are seriously threatened by number of factors such as habitat destruction, overgrazing, ocean warming, and pollution. The effect of chronic, but low levels of pollutants on the long-term survival of the canopy-forming algae is not well unders...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-73990-5
更新日期:2020-10-20 00:00:00
abstract::To determine the incidence of acute cardiac injury (ACI), the factors associated with ACI and the in-hospital mortality in patients with COVID-19, especially in severe patients. All consecutive in-patients with laboratory-confirmed COVID-19 from Tongji Hospital in Wuhan during February 1 and March 29, 2020 were includ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-77172-1
更新日期:2020-11-24 00:00:00
abstract::While implicated in therapeutic resistance, malignant progenitor cell cycle kinetics have been difficult to quantify in real-time. We developed an efficient lentiviral bicistronic fluorescent, ubiquitination-based cell cycle indicator reporter (Fucci2BL) to image live single progenitors on a defined niche coupled with...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep23885
更新日期:2016-04-04 00:00:00
abstract::Endothelial mesenchymal transition (EndMT) plays a critical role in the pathogenesis and progression of interstitial and perivascular fibrosis after acute myocardial infarction (AMI). Pigment epithelium-derived factor (PEDF) is shown to be a new therapeutic target owing to its protective role in cardiovascular disease...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep41932
更新日期:2017-02-07 00:00:00
abstract::Rising temperatures in the Arctic cause accelerated mass loss from the Greenland Ice Sheet and reduced sea ice cover. Tidewater outlet glaciers represent direct connections between glaciers and the ocean where melt rates at the ice-ocean interface are influenced by ocean temperature and circulation. However, few measu...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-017-05089-3
更新日期:2017-07-10 00:00:00
abstract::Calcium regulation plays a central role in cardiac function. Several variants in the calcium channel Cav1.2 have been implicated in arrhythmic syndromes. We screened patients with Brugada syndrome, short QT syndrome, early repolarisation syndrome, and idiopathic ventricular fibrillation to determine the frequency and ...
journal_title:Scientific reports
pub_type: 杂志文章,多中心研究
doi:10.1038/s41598-018-32867-4
更新日期:2018-10-02 00:00:00
abstract::Highly Tm(3+) doped optical fibers are urgently desirable for 2.0 μm compact single-frequency fiber laser and high-repetition-rate mode-locked fiber laser. Here, we systematically investigated the optical parameters, energy transfer processes and thermal properties of Tm(3+) doped barium gallo-germanate (BGG) glasses....
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep20344
更新日期:2016-02-01 00:00:00
abstract::Floral transition and petal onset, as two main aspects of flower development, are crucial to rapeseed evolutionary success and yield formation. Currently, very little is known regarding the genetic architecture that regulates flowering time and petal morphogenesis in Brassica napus. In the present study, a genome-wide...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep30576
更新日期:2016-07-27 00:00:00
abstract::Although the use of metabarcoding to identify taxa in DNA mixtures is widely approved, its reliability in quantifying taxon abundance is still the subject of debate. In this study we investigated the relationships between the amount of pollen grains in mock solutions and the abundance of high-throughput sequence reads...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-61198-6
更新日期:2020-03-06 00:00:00
abstract::A Disintegrin and Metalloproteinase-15 (ADAM15) is a transmembrane protein involved in protein ectodomain shedding, cell adhesion and signalling. We previously cloned and characterised alternatively spliced variants of ADAM15 that differ in their intracellular domains and demonstrated correlation of the expression of ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-49021-3
更新日期:2019-08-29 00:00:00
abstract::The combination of genome-edited human embryonic stem cells (hESCs) and subsequent neural differentiation is a powerful tool to study neurodevelopmental disorders. Since the naïve state of pluripotency has favourable characteristics for efficient genome-editing, we optimized a workflow for the CRISPR/Cas9 system in th...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-017-16932-y
更新日期:2017-11-30 00:00:00
abstract::Multiple sclerosis is a chronic, autoimmune and neurodegenerative disease affecting multiple functional systems and resulting in motor impairments associated with muscle weakness and lack of movement coordination. We quantified upper limb motor deficits with a robot-based assessment including behavioral and muscle syn...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-018-20343-y
更新日期:2018-02-01 00:00:00
abstract::Invasive species populations periodically collapse from high to low abundance, sometimes even to extinction. Pathogens and the burden they place on invader immune systems have been hypothesised as a mechanism for these collapses. We examined the association of the bacterial pathogen (Pseudomonas spp.) and the viral co...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-41843-5
更新日期:2019-04-08 00:00:00
abstract::Migration and interactions of immune cells are routinely studied by time-lapse microscopy of in vitro migration and confrontation assays. To objectively quantify the dynamic behavior of cells, software tools for automated cell tracking can be applied. However, many existing tracking algorithms recognize only rather sh...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-39725-x
更新日期:2019-03-01 00:00:00
abstract::Primary human hepatocytes are necessary to evaluate cytotoxicity, drug metabolism, and drug-drug interactions for candidate compounds in early-phase drug discovery and development. However, these analyses are often hampered by limited resources and functional or genetic variation among lots. HepaRG human hepatocellula...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-017-03146-5
更新日期:2017-06-06 00:00:00
abstract::Using analytical expressions for the magnetization textures of thin submicron-sized magnetic cylinders in vortex state, we derive closed-form algebraic expressions for the ensuing small-angle neutron scattering (SANS) cross sections. Specifically, for the perpendicular and parallel scattering geometries, we have compu...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep25055
更新日期:2016-04-26 00:00:00
abstract::Methylmercury causes serious damage to the central nervous system, but the molecular mechanisms of methylmercury toxicity are only marginally understood. In this study, we used a gene-deletion mutant library of budding yeast to conduct genome-wide screening for gene knockouts affecting the sensitivity of methylmercury...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep05888
更新日期:2014-07-30 00:00:00
abstract::There is still much to understand about the brain's colour processing mechanisms and the transformation from cone-opponent representations to perceptual hues. Moreover, it is unclear which area(s) in the brain represent unique hues. We propose a hierarchical model inspired by the neuronal mechanisms in the brain for l...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-64969-3
更新日期:2020-05-22 00:00:00
abstract::Mitochondria behave as functional and structural hubs for innate defense against intracellular infection. While the mitochondrial membrane serves as a platform for the assembly of signaling complexes activated by intracellular infection, various danger molecules derived from impaired mitochondria activate innate signa...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-68053-8
更新日期:2020-07-07 00:00:00
abstract::Controlling the nanoscale arrangement in polymer-fullerene organic solar cells is of paramount importance to boost the performance of such promising class of photovoltaic diodes. In this work, we use a pseudo-bilayer system made of poly(2,5-bis(3-hexadecylthiophen-2-yl)thieno[3,2-b]thiophene (PBTTT) and [6,6]-phenyl-C...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep34609
更新日期:2016-10-04 00:00:00
abstract::Outer membrane vesicles (OMVs) produced by Gram-negative bacteria have roles in cell-to-cell signaling, biofilm formation, and stress responses. Here, the effects of abiotic stressors on OMV contents and composition from biofilm cells of the plant health-promoting bacterium Pseudomonas chlororaphis O6 (PcO6) are exami...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-78357-4
更新日期:2020-12-04 00:00:00
abstract::Bacterial environmental and surgical site infection (SSI) surveillance was implemented from 2011-2016 in a UK Equine Referral Veterinary Hospital and identified 81 methicillin-resistant Staphylococcus aureus (MRSA) isolates. A cluster of MRSA SSIs occurred in early 2016 with the isolates confirmed as ST398 by multiloc...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-017-05559-8
更新日期:2017-07-14 00:00:00
abstract::Free-ocean CO2 enrichment (FOCE) experiments have been deployed in marine ecosystems to manipulate carbonate system conditions to those predicted in future oceans. We investigated whether the pH/carbonate chemistry of extremely cold polar waters can be manipulated in an ecologically relevant way, to represent conditio...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-018-21029-1
更新日期:2018-02-12 00:00:00
abstract::Nitrogen vacancy (NV) centers in diamond have been used as ultrasensitive magnetometers to perform nuclear magnetic resonance (NMR) spectroscopy of statistically polarized samples at 1-100 nm length scales. However, the spectral linewidth is typically limited to the kHz level, both by the NV sensor coherence time and ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-43404-2
更新日期:2019-05-06 00:00:00
abstract::Dopamine is an important neurotransmitter that plays a key role in a wide range of both locomotive and cognitive functions in humans. Disturbances on the dopaminergic system cause, among others, psychosis, Parkinson's disease and Huntington's disease. Antipsychotics are drugs that interact primarily with the dopamine ...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-020-78446-4
更新日期:2020-12-09 00:00:00
abstract::The nickel-titanium alloy (57Ni-43Ti in wt%) was atomized by the plasma rotating electrode process (PREP). The PREP parameters such as plasma arc current, rotating electrode speed with corresponding PREP powder size range in weight percentage analysis, powder morphology and biocapability of cells were studied by scann...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-018-32101-1
更新日期:2018-09-13 00:00:00
abstract::An impairment of cardiac function is a key feature of the cardiovascular failure associated with sepsis. Although there is some evidence that suppression of sarcoplasmic reticulum Ca2+-ATP-ase (SERCA2) contributes to septic cardiomyopathy, it is not known whether prevention of the down-regulation of SERCA2 improves ou...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/srep37277
更新日期:2016-11-17 00:00:00
abstract::We study the capillary retraction of a Newtonian semi-infinite liquid filament through analytical methods. We derive a long-time asymptotic-state expansion for the filament profile using a one-dimensional free-surface slender cylindrical flow model based on the three-dimensional axisymmetric Navier-Stokes equations. T...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-51824-3
更新日期:2019-10-29 00:00:00
abstract::Several mosquito species have been described as vectors for the Zika virus (ZIKV), such as those in the Aedes, Anopheles, Mansonia and Culex genera. Our previous survey studies were found the ZIKV RNA positive in both male, female and larvae of Culex quinquefasciatus Say and Aedes aegypti (L.) mosquitoes collected fro...
journal_title:Scientific reports
pub_type: 杂志文章
doi:10.1038/s41598-019-41727-8
更新日期:2019-03-27 00:00:00