Widespread mitovirus sequences in plant genomes.

Abstract:

:The exploration of the evolution of RNA viruses has been aided recently by the discovery of copies of fragments or complete genomes of non-retroviral RNA viruses (Non-retroviral Endogenous RNA Viral Elements, or NERVEs) in many eukaryotic nuclear genomes. Among the most prominent NERVEs are partial copies of the RNA dependent RNA polymerase (RdRP) of the mitoviruses in plant mitochondrial genomes. Mitoviruses are in the family Narnaviridae, which are the simplest viruses, encoding only a single protein (the RdRP) in their unencapsidated viral plus strand. Narnaviruses are known only in fungi, and the origin of plant mitochondrial mitovirus NERVEs appears to be horizontal transfer from plant pathogenic fungi. At least one mitochondrial mitovirus NERVE, but not its nuclear copy, is expressed.

journal_name

PeerJ

journal_title

PeerJ

authors

Bruenn JA,Warner BE,Yerramsetty P

doi

10.7717/peerj.876

subject

Has Abstract

pub_date

2015-04-09 00:00:00

pages

e876

issn

2167-8359

pii

876

journal_volume

3

pub_type

杂志文章

相关文献

PeerJ文献大全
  • Intra-individual heteroplasmy in the Gentiana tongolensis plastid genome (Gentianaceae).

    abstract::Chloroplasts are typically inherited from the female parent and are haploid in most angiosperms, but rare intra-individual heteroplasmy in plastid genomes has been reported in plants. Here, we report an example of plastome heteroplasmy and its characteristics in Gentiana tongolensis (Gentianaceae). The plastid genome ...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8025

    authors: Sun SS,Zhou XJ,Li ZZ,Song HY,Long ZC,Fu PC

    更新日期:2019-11-27 00:00:00

  • Caprellid amphipods (Caprella spp.) are vulnerable to both physiological and habitat-mediated effects of ocean acidification.

    abstract::Ocean acidification (OA) is one of the most significant threats to marine life, and is predicted to drive important changes in marine communities. Although OA impacts will be the sum of direct effects mediated by alterations of physiological rates and indirect effects mediated by shifts in species interactions and bio...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.5327

    authors: Lim EG,Harley CDG

    更新日期:2018-07-31 00:00:00

  • The impact of PI3K inhibitors on breast cancer cell and its tumor microenvironment.

    abstract::The phosphoinositide 3-kinase (PI3K) pathway shows frequent aberrant alterations and pathological activation in breast cancer cells. While PI3K inhibitors have not achieved expectant therapeutic efficacy in clinical trials, and several studies provide promising combination strategies to substantially maximize therapeu...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.5092

    authors: Qin H,Liu L,Sun S,Zhang D,Sheng J,Li B,Yang W

    更新日期:2018-06-19 00:00:00

  • Interspecific differences of stridulatory signals in three species of bark beetles from the genus Polygraphus Er. (Coleoptera: Curculionidae, Scolytinae) inhabiting the island of Sakhalin.

    abstract::Stridulatory signals are involved in conspecific interactions between bark beetles (Coleoptera: Curculionidae, Scolytinae). In this study, we compared the qualitative profiles of acoustic signals in three species from the genus Polygraphus Er. Sympatry can be periodically observed in two of them -P. proximus and P. su...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8281

    authors: Kerchev IA

    更新日期:2020-01-02 00:00:00

  • The incidence rates of endometrial hyperplasia and endometrial cancer: a four-year population-based study.

    abstract:INTRODUCTION:The aim of this study was to determine the incidence rates of endometrial hyperplasia (EH) and endometrial cancer (EC) in the Republic of Korea using national insurance claim data generated from 2009 to 2012. MATERIALS AND METHODS:Data that were generated from 2009 to 2012 were sourced from the Korean Hea...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.2374

    authors: Yuk JS

    更新日期:2016-08-24 00:00:00

  • Effect of radiotherapy on the gut microbiome in pediatric cancer patients: a pilot study.

    abstract::The incidence of pediatric cancer is lower than that of adult cancer worldwide. However, the former has detrimental side effects on the health of individuals, even after the cancer is cured, due to the impact of treatment on development. Recently, correlations have been made between the gut microbiome and cancer in se...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.7683

    authors: Sahly N,Moustafa A,Zaghloul M,Salem TZ

    更新日期:2019-09-23 00:00:00

  • Increased misophonia in self-reported Autonomous Sensory Meridian Response.

    abstract:Background:Autonomous Sensory Meridian Response (ASMR) is a sensory experience elicited by auditory and visual triggers, which so far received little attention from the scientific community. This self-reported phenomenon is described as a relaxing tingling sensation, which typically originates on scalp and spreads thro...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.5351

    authors: Janik McErlean AB,Banissy MJ

    更新日期:2018-08-06 00:00:00

  • Distribution, habitat suitability, conservation state and natural history of endangered salamander Bolitoglossa pandi.

    abstract:Background:Pandi's mushroom-tongue salamander (Bolitoglossa pandi) is one of the threatened amphibians in South America, as well as a flagship species for the Colombian conservation agenda. This species is endemic to the Andean cloud forests of the western slope of the Cordillera Oriental of Colombia, occurring only in...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.9901

    authors: Angarita-Sierra T,Bonilla-Gómez MA,Sánchez DA,Acosta-Galvis AR,Medina-Ovalle H,Solano-Moreno A,Ulloa-Rengifo S,Guevara-Guevara D,Torres-Ramirez JJ,Curaca-Fierro S,Cabrera-Amaya DM,Infante-Betancour JA,Londoño-Montaño LF,Albarán

    更新日期:2020-09-24 00:00:00

  • High cytoplasmic YAP1 expression predicts a poor prognosis in patients with colorectal cancer.

    abstract:Purpose:Yes associated protein 1 (YAP1), which is a standout amongst the most essential effectors of the Hippo pathway, assumes a vital part in a few kinds of cancer. However, whether YAP1 is an oncogene in CRC (colorectal cancer) remains controversial, and the association between the subcellular localization of YAP1 a...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.10397

    authors: Dong T,Yuan Y,Xiang X,Sang S,Shen H,Wang L,Yang C,Li F,Li H,Zheng S

    更新日期:2020-11-19 00:00:00

  • An investigation of the genus Mesacanthus (Chordata: Acanthodii) from the Orcadian Basin and Midland Valley areas of Northern and Central Scotland using traditional morphometrics.

    abstract::Mesacanthus is a common and speciose genus of acanthodian fish from Lower Old Red Sandstone and Middle Old Red Sandstone assemblages (representing the Lower Devonian and Middle Devonian respectively) and is well represented in many palaeoichthyology collections in the UK. Based upon descriptions given during the 19th ...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1331

    authors: Baron MG

    更新日期:2015-10-29 00:00:00

  • Transcriptomic evidence for involvement of reactive oxygen species in Rhizoctonia solani AG1 IA sclerotia maturation.

    abstract::Rhizoctonia solani AG1 IA is a soil-borne fungal phytopathogen that can significantly harm crops resulting in economic loss. This species overwinters in grass roots and diseased plants, and produces sclerotia that infect future crops. R. solani AG1 IA does not produce spores; therefore, understanding the molecular mec...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.5103

    authors: Liu B,Wang H,Ma Z,Gai X,Sun Y,He S,Liu X,Wang Y,Xuan Y,Gao Z

    更新日期:2018-06-18 00:00:00

  • Shifting headlines? Size trends of newsworthy fishes.

    abstract::The shifting baseline syndrome describes a gradual lowering of human cognitive baselines, as each generation accepts a lower standard of resource abundance or size as the new norm. There is strong empirical evidence of declining trends of abundance and body sizes of marine fish species reported from docks and markets....

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.6395

    authors: Francis FT,Howard BR,Berchtold AE,Branch TA,Chaves LCT,Dunic JC,Favaro B,Jeffrey KM,Malpica-Cruz L,Maslowski N,Schultz JA,Smith NS,Côté IM

    更新日期:2019-02-15 00:00:00

  • Effect of acute eye fatigue on cognition for young females: a pilot study.

    abstract::The number of people suffering from eye fatigue induced by visual display terminal (VDT) viewing is expected to increase in the modern world. Eye dysfunction is suggested to induce a decrease in cognitive function, at least in the long term. Furthermore, considering other previous findings, it may be reasonable to thi...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.7978

    authors: Akagi R,Tonotsuka M,Horie R,Hirata K,Ando S

    更新日期:2019-10-29 00:00:00

  • Measuring the well-being of health care professionals in the Punjab: a psychometric evaluation of the Warwick-Edinburgh Mental Well-being Scale in a Pakistani population.

    abstract::Background. There is growing awareness of the public health importance of mental well-being both in the general population and in specific groups. The well-being of health professionals is likely to influence the quality of the care they deliver. This study was carried out to examine the well-being of Pakistani health...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1264

    authors: Waqas A,Ahmad W,Haddad M,Taggart FM,Muhammad Z,Bukhari MH,Sami SA,Batool SM,Najeeb F,Hanif A,Rizvi ZA,Ejaz S

    更新日期:2015-10-01 00:00:00

  • Transcriptional profiling to identify the key genes and pathways of pterygium.

    abstract:Purpose:Pterygium results from a variety of biological pathways that are involved in the formation of ocular surface diseases. However, the exact pathogenesis of pterygium is still unclear. Our study focused on gene expression profiles to better understand the potential mechanisms of pterygium. Methods:RNA sequencing ...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.9056

    authors: Chen Y,Wang H,Jiang Y,Zhang X,Wang Q

    更新日期:2020-05-04 00:00:00

  • 2D versus 3D real time ultrasound with live xPlane imaging to visualize aortic and ductal arches: comparison between methods.

    abstract:Background:The diagnosis of congenital heart defects is challenging, especially for what concerns conotruncal anomalies. Indeed, although the screening techniques of fetal cardiac anomalies have greatly improved, the detection rate of conotruncal anomalies still remains low due to the fact that they are associated with...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.4561

    authors: Dell'Oro S,Verderio M,Incerti M,Mastrolia SA,Cozzolino S,Vergani P

    更新日期:2018-04-06 00:00:00

  • Inhibitory effect of microalgae and cyanobacteria extracts on influenza virus replication and neuraminidase activity.

    abstract:Background:The influenza virus can cause seasonal infections with mild to severe symptoms, circulating worldwide, and it can affect people in any age group. Therefore, this infection is a serious public health problem that causes severe illness and death in high-risk populations. Every year, 0.5% of the world's populat...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.5716

    authors: Silva T,S Salomon P,Hamerski L,Walter J,B Menezes R,Siqueira JE,Santos A,Santos JAM,Ferme N,Guimarães T,O Fistarol G,I Hargreaves P,Thompson C,Thompson F,Souza TM,Siqueira M,Miranda M

    更新日期:2018-10-26 00:00:00

  • Effects of different ablation points of renal denervation on the efficacy of resistant hypertension.

    abstract:Objective:To explore the blood pressure response to different ablation points of renal denervation (RDN) in patients with resistant hypertension. Methods:A total of 42 cases with resistant hypertension treated by RDN in our center from 2013 to 2015 were retrospectively analyzed. The patients were divided into two grou...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.9842

    authors: Zhang H,Li LY,Xiao RX,Zhang TC,Liu ZJ,Gao JQ

    更新日期:2020-09-15 00:00:00

  • Clinical impact of human papillomavirus in laryngeal squamous cell carcinoma: a retrospective study.

    abstract:OBJECTIVES:The purpose of this study is to determine the prevalence and clinical impact of human papillomavirus (HPV) related laryngeal squamous cell carcinoma (LSCC). METHODS:A total of 106 LSCC patients who underwent primary surgical resection with or without adjuvant radiotherapy/chemoradiotherapy were enrolled ret...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.3395

    authors: Chen WC,Chuang HC,Lin YT,Huang CC,Chien CY

    更新日期:2017-05-30 00:00:00

  • Lizard movement tracks: variation in path re-use behaviour is consistent with a scent-marking function.

    abstract::Individual movement influences the spatial and social structuring of a population. Animals regularly use the same paths to move efficiently to familiar places, or to patrol and mark home ranges. We found that Australian sleepy lizards (Tiliqua rugosa), a monogamous species with stable pair-bonds, repeatedly used the s...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1844

    authors: Leu ST,Jackson G,Roddick JF,Bull CM

    更新日期:2016-03-22 00:00:00

  • The p53 signaling pathway of the large yellow croaker (Larimichthys crocea) responds to acute cold stress: evidence via spatiotemporal expression analysis of p53, p21, MDM2, IGF-1, Gadd45, Fas, and Akt.

    abstract::The p53 activation is induced by stressors, such as DNA damage, oxidative stress, and activated oncogenes, and can promote cell cycle arrest, cellular senescence, and apoptosis. The large yellow croaker (Larimichthys crocea) is an important warm temperate marine fish in the Chinese aquiculture industry. However, few s...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.10532

    authors: Qian B,Qi X,Bai Y,Wu Y

    更新日期:2020-12-18 00:00:00

  • Monitoring coastal pollution associated with the largest oil refinery complex of Venezuela.

    abstract::This study evaluated pollution levels in water and sediments of Península de Paraguaná and related these levels with benthic macrofauna along a coastal area where the largest Venezuelan oil refineries have operated over the past 60 years. For this, the concentration of heavy metals, of hydrocarbon compounds and the co...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.2171

    authors: Croquer A,Bone D,Bastidas C,Ramos R,García E

    更新日期:2016-06-23 00:00:00

  • Characterization of four new monoclonal antibodies against the distal N-terminal region of PrP(c).

    abstract::Prion diseases are a group of fatal neurodegenerative disorders that affect humans and animals. They are characterized by the accumulation in the central nervous system of a pathological form of the host-encoded prion protein (PrP(C)). The prion protein is a membrane glycoprotein that consists of two domains: a globul...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.811

    authors: Didonna A,Venturini AC,Hartman K,Vranac T,Čurin Šerbec V,Legname G

    更新日期:2015-03-19 00:00:00

  • Comparison of diversity and composition of macrofungal species between intensive mushroom harvesting and non-harvesting areas in Oaxaca, Mexico.

    abstract::Wild edible mushrooms have been collected and consumed by human groups for centuries, and today they represent a relevant source of food and income for many rural families worldwide. Preserving these non-timber forest products is of great interest, and there is concern about the damage caused by intensive mushroom har...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8325

    authors: Ruiz-Almenara C,Gándara E,Gómez-Hernández M

    更新日期:2019-12-18 00:00:00

  • An integrated pipeline for next generation sequencing and annotation of the complete mitochondrial genome of the giant intestinal fluke, Fasciolopsis buski (Lankester, 1857) Looss, 1899.

    abstract::Helminths include both parasitic nematodes (roundworms) and platyhelminths (trematode and cestode flatworms) that are abundant, and are of clinical importance. The genetic characterization of parasitic flatworms using advanced molecular tools is central to the diagnosis and control of infections. Although the nuclear ...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.207

    authors: Biswal DK,Ghatani S,Shylla JA,Sahu R,Mullapudi N,Bhattacharya A,Tandon V

    更新日期:2013-11-12 00:00:00

  • Transcriptome sequencing and analysis reveals the molecular response to selenium stimuli in Pueraria lobata (willd.) Ohwi.

    abstract::Pueraria lobata (willd.) Ohwi is a consumable selenium-enriched plant used for medicinal purposes. The molecular response to selenium (Se) stimuli in P. lobata is currently unknown. We used RNA-Seq to identify potential genes involved in selenite metabolism and analyzed their expression profiles. We obtained a total o...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8768

    authors: Guo K,Yao Y,Yang M,Li Y,Wu B,Lin X

    更新日期:2020-03-24 00:00:00

  • Repeated hands-and-knees positioning during labour: a randomized pilot study.

    abstract::Background. Caesarean birth rates in North America continue to rise, in the absence of benefit for mothers and babies. One reason may be that hospitalized labouring women spend most of their labours in recumbent or semi-recumbent positions. Although hands-and-knees position has theoretical advantages, efforts to encou...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.25

    authors: Hodnett ED,Stremler R,Halpern SH,Weston J,Windrim R

    更新日期:2013-02-12 00:00:00

  • Enhanced susceptibility to predation in corals of compromised condition.

    abstract::The marine gastropod, Coralliophila abbreviata, is an obligate corallivore that causes substantial mortality in Caribbean Acropora spp. Considering the imperiled status of Acropora cervicornis and A. palmata, a better understanding of ecological interactions resulting in tissue loss may enable more effective conservat...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.1239

    authors: Bright AJ,Cameron CM,Miller MW

    更新日期:2015-09-10 00:00:00

  • Integrative analysis reveals pathways associated with sex reversal in Cynoglossus semilaevis.

    abstract::Sex reversal is a complex biological phenomenon exhibited by Cynoglossus semilaevis. Some genetic females may irreversibly convert to pseudomales, thus increasing aquaculture costs because males grow much more slowly than females. In this study, an integrative analysis of transcriptome and proteome was performed to co...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.8801

    authors: Ye Z,Wang W,Zhang Y,Wang L,Cui Y,Li H

    更新日期:2020-03-19 00:00:00

  • Clinical significance of pretreatment prognostic nutritional index and lymphocyte-to-monocyte ratio in patients with advanced p16-negative oropharyngeal cancer-a retrospective study.

    abstract:Background:Systemic inflammation and nutritional status both play roles in the survival of cancer patients. Therefore, it is important to understand the effects of prognostic nutritional index (PNI) and lymphocyte-to-monocyte ratio (LMR) on the survival of patients with advanced p16-negative oropharyngeal cancer. Meth...

    journal_title:PeerJ

    pub_type: 杂志文章

    doi:10.7717/peerj.10465

    authors: Tsai MH,Huang TL,Chuang HC,Lin YT,Fang FM,Lu H,Chien CY

    更新日期:2020-12-01 00:00:00