Abstract:
:The quantitative formalism called Metabolic Control Theory makes it possible to be precise in discussions of metabolic control. To illustrate this, I will mention 2 experimental systems where free energy is converted from one form to another, i.e., bacteriorhodopsin liposomes and mitochondrial oxidative phosphorylation. More specifically I shall discuss how the distribution of the control of fluxes, concentrations and potentials, among the various enzymes (catalysts) in these systems has been measured and how this distribution can be understood in terms of the enzyme properties. From the outset, Metabolic Control Theory was valid for branched metabolic pathways with non-linear kinetics. Yet, it seemed to be limited to metabolic pathways without enzyme-enzyme interactions and to steady states. It is now clear that these limitations were apparent only and recent extensions to Metabolic Control Theory deal explicitly with enzyme-enzyme interaction and with transient-time analysis. Other limitations are inherent. For instance, Metabolic Control Theory pays for its clarity and exactness by being limited to small modulations. Mosaic Non Equilibrium Thermodynamics and Biochemical System Analysis are formalisms that deal with larger changes, at the cost of accuracy and exactness.
journal_name
Biochimiejournal_title
Biochimieauthors
Westerhoff HVdoi
10.1016/0300-9084(89)90071-0subject
Has Abstractpub_date
1989-08-01 00:00:00pages
877-86issue
8eissn
0300-9084issn
1638-6183pii
0300-9084(89)90071-0journal_volume
71pub_type
杂志文章,评审相关文献
BIOCHIMIE文献大全abstract::Calcium-independent receptor of alpha-latrotoxin (CIRL-1) is an adhesion G protein-coupled receptor implicated in the regulation of exocytosis. CIRL-1 biosynthesis involves constitutive proteolytic processing that takes place in the endoplasmic reticulum, requires the receptor's GPS domain, and yields heterologous two...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/j.biochi.2010.01.015
更新日期:2010-04-01 00:00:00
abstract::During the suckling period, the rats are fed continuously with milk, which is a high-fat low-carbohydrate diet (HF). At weaning, milk is progressively replaced by the rat's laboratory chow which is a high-carbohydrate low-fat diet (HCHO), and this is accompanied by large hormonal modifications: an increase in plasma i...
journal_title:Biochimie
pub_type: 杂志文章,评审
doi:10.1016/0300-9084(91)90077-e
更新日期:1991-01-01 00:00:00
abstract::Thyroglobulin is a large-size iodoglycoprotein specific to thyroid tissue and is the substrate for the synthesis of thyroid hormones, thyroxine and 3,5,3'-triiodothyronine. Recent studies, which greatly benefited from recombinant DNA methodologies, improved the knowledge of several structural features of this dimeric ...
journal_title:Biochimie
pub_type: 杂志文章,评审
doi:10.1016/0300-9084(89)90057-6
更新日期:1989-02-01 00:00:00
abstract::Secondary structure-forming DNA motifs have achieved infamy because of their association with a variety of human diseases and cancer. The 3rd FASEB summer conference on dynamic DNA structures focused on the mechanisms responsible for the instabilities inherent to repetitive DNA and presented many exciting and novel as...
journal_title:Biochimie
pub_type:
doi:10.1016/j.biochi.2012.10.005
更新日期:2013-02-01 00:00:00
abstract::The secretome produced by cells within the bone marrow is significant to homeostasis. The bone marrow, a well-studied organ, has multiple niches with distinct roles for supporting stem cell functions. Thus, an understanding of mediators involved in the regulation of stem cells could serve as a model for clinical probl...
journal_title:Biochimie
pub_type: 杂志文章,评审
doi:10.1016/j.biochi.2018.05.018
更新日期:2018-12-01 00:00:00
abstract::In this review, we show how the stability of the asymmetric transverse distribution of phospholipids and the physiological role of the asymmetric distribution can be explained. Experiments with paramagnetic or fluorescent lipids enabled us to show that in fresh red blood cells, i.e. containing ATP, and in resealed gho...
journal_title:Biochimie
pub_type: 杂志文章,评审
doi:10.1016/s0300-9084(86)80005-0
更新日期:1986-03-01 00:00:00
abstract::The physical maps of cloned recBCD gene regions of Serratia marcescens and Proteus mirabilis were correlated to genes located in this region. The genes thyA, recC, recB, recD and argA were organized as in Escherichia coli. The 3 rec genes code for the 3 different subunits of the RecBCD enzyme and produced enzymes prom...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/0300-9084(91)90104-9
更新日期:1991-04-01 00:00:00
abstract::A key target in the treatment of HIV-1/AIDS has been the viral protease. Here we first studied in silico the evolution of protease resistance. Primary active site resistance mutations were found to weaken interactions between protease and both inhibitor and substrate P4-P4' residues. We next studied the effects of sec...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/j.biochi.2015.08.009
更新日期:2015-11-01 00:00:00
abstract::Zika and Dengue viruses have attracted substantial attention from researchers in light of recent outbreaks of Dengue fever and increases in cases of congenital microcephaly in areas with Zika incidence. This review summarizes the current state of knowledge about Zika and Dengue proteases. These enzymes have several in...
journal_title:Biochimie
pub_type: 杂志文章,评审
doi:10.1016/j.biochi.2019.05.004
更新日期:2019-11-01 00:00:00
abstract::Human delta-aminolevulinic acid dehydratase (ALA-D) was purified 9 000-fold by salt precipitation, ion-exchange chromatography and gel filtration. These methods resulted into an electrophoretically and immunologically pure protein. The optimum pH of the enzyme is 6.6 and its Km with ALA : 4.8 X 10(-4) M. The enzymatic...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/s0300-9084(80)80256-2
更新日期:1979-01-01 00:00:00
abstract::Our principle hypothesis is that the hypothalamic hormone, gonadotropin-releasing hormone (GnRH), is an immunostimulatory hormone and plays a pivotal role in the gender differences in immunity and/or autoimmunity. As a general rule, females display heightened immune responses and heightened endocrinological responsive...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/s0300-9084(03)00106-8
更新日期:2003-06-01 00:00:00
abstract::As the medaka is a popular fish model in genetics, developmental biology and toxicology, the development of an efficient transgenic medaka technique is important for a variety of biological experiments. Here we demonstrated that the maize transposon system, Ac/Ds, greatly improved the transgenesis of microinjected DNA...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/j.biochi.2011.07.006
更新日期:2011-10-01 00:00:00
abstract::In order to study the relationship between bile cholesterol and free cholesterol carried by high and low density lipoproteins (HDL and LDL), 10 male Wistar rats, 11 weeks old and fed with a standard diet were divided into 3 groups which received an intravenous infusion (jugular vein) of either LDL, HDL or liposomes. L...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/0300-9084(87)90270-7
更新日期:1987-01-01 00:00:00
abstract::Leptin is a cytokine secreted by the adipose tissue that is involved in the control of body weight. We previously showed that a point mutation (R105W) in leptin results in leptin deficiency, marked obesity and hypogonadism in humans adults. Expression in COS1 cells showed impaired secretion and intracellular accumulat...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/j.biochi.2004.06.005
更新日期:2004-06-01 00:00:00
abstract::At the first symptoms of organisation of the silkgland in the embryo, mitoses stop and nuclei start to grow. Through autoradiographic studies, performed after sequenced labeling with [3H] and [14C] thymidine, the durations of the different phases of DNA synthesis cycles (T = 42 to 48 h, S = 22 to 25 h, G = 20 to 23 h)...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/s0300-9084(79)80066-8
更新日期:1979-01-01 00:00:00
abstract:BACKGROUND:Accumulating evidence suggests that microRNA-590 (miR-590) has protective effects on cardiovascular diseases, but the mechanism is unknown. Interestingly, previous studies from our laboratory and others have shown that macrophage-derived lipoprotein lipase (LPL) might accelerate atherosclerosis by promoting ...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/j.biochi.2014.08.003
更新日期:2014-11-01 00:00:00
abstract::Catalase (E.C 1.11.1.6) was purified from leaves of Zandedeschia aethiopica to apparent homogeneity by a one-step hydrophobic interaction chromatography on a phenyl Sepharose CL-4B column. The purified enzyme preparation was obtained with a final recovery of enzyme activity of about 61% and a specific activity of 146 ...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/0300-9084(88)90035-1
更新日期:1988-12-01 00:00:00
abstract::MicroRNAs (miRNAs) are ∼21 nt non-coding small RNAs which regulate gene expression at the post-transcriptional level in plants and animals. Until recently, only limited numbers of miRNAs were identified in Cucurbitaceae, a large flowering plant family. In this study, 220 potential miRNA candidates were identified from...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/j.biochi.2014.03.002
更新日期:2014-07-01 00:00:00
abstract::Two forms of baker's yease valyl-tRNA synthetase have been purified to apparent homogeneity by classical methods. It was demonstrated that one of the two forms of the enzyme originates from the other by proteolysis, the respective amounts of each form depending on the physiological state of the yeast. The species main...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/s0300-9084(76)80579-2
更新日期:1975-01-01 00:00:00
abstract::Dihydroorotate dehydrogenase (DHODH) is the fourth enzyme in the de novo pyrimidine biosynthetic pathway and has been exploited as the target for therapy against proliferative and parasitic diseases. In this study, we report the crystal structures of DHODH from Leishmania major, the species of Leishmania associated wi...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/j.biochi.2012.04.003
更新日期:2012-08-01 00:00:00
abstract::We identified a T-to-C mutation 2 nucleotides (nt) upstream from the AG in a GT-AG intron between exons 2 and 3 in the human T-cell leukemia virus type I (HTLV-I) tax mRNA. This mutation resulted in the preferential usage of an alternative splice site, causing a 75-nt elongation of tax mRNA and reduced production of v...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/j.biochi.2005.07.013
更新日期:2006-02-01 00:00:00
abstract::The short isoform of Rho guanine nucleotide exchange factor ARHGEF5 is known as TIM, which plays diverse roles in, for example, tumorigenesis, neuronal development and Src-induced podosome formation through the activation of its substrates, the Rho family of GTPases. The activation is auto-inhibited by a putative heli...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/j.biochi.2015.01.011
更新日期:2015-04-01 00:00:00
abstract::The Escherichia coli Fis protein is a dimeric DNA-binding protein whose specific binding sites share a weak consensus sequence. Use of the gel retardation technique indicates that binding of Fis on a linear DNA fragment leads to the formation of a ladder of defined retarded complexes, independently of the presence of ...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/0300-9084(94)90021-3
更新日期:1994-01-01 00:00:00
abstract::NikR proteins are bacterial metallo-regulatory transcription factors that control the expression of the nickel uptake system and/or nickel containing enzymes such as urease, and are involved in the acid stress response. Here, a comparative study is reported on NikR from Helicobacter pylori (HpNikR) and Escherichia col...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/j.biochi.2006.07.016
更新日期:2006-11-01 00:00:00
abstract::The effect of alpha-tocopherol on the structure and thermotropic phase behaviour of 1-palmitoyl-2-oleoyl-phosphatidylethanolamine dispersed in excess water was examined by synchrotron X-ray diffraction and differential scanning calorimetry. Small- and wide-angle X-ray scattering intensity profiles were recorded from m...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/j.biochi.2006.07.017
更新日期:2006-12-01 00:00:00
abstract::We have purified, by a three step procedure, a yeast C-nitrosoreductase and studied its action on p-nitroso-N,N-dimethylaniline. Microcalorimetric measurements performed on the microcalorimeter LKB "batch", have been given the number of protons exchanged during the reaction : four protons are involved. Two are given b...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/s0300-9084(75)80132-5
更新日期:1975-01-01 00:00:00
abstract::Present knowledge of the different enzymatic steps of the denitrification chains in various bacteria, particularly Paracoccus denitrificans and Pseudomonas aeruginosa has been briefly reviewed. The question whether nitric oxide (NO), nitrous oxide (N2O) and other nitrogen derivatives are obligatory intermediates has b...
journal_title:Biochimie
pub_type: 杂志文章,评审
doi:10.1016/0300-9084(84)90005-1
更新日期:1984-04-01 00:00:00
abstract::Experimental evidence accumulated to date by several research groups indicates that antisense oligodeoxynucleotides targeted against messenger RNA (mRNA) sequences located downstream of the initiation codon fail to inhibit the translation of this mRNA unless the hybrid is cleaved by RNase H. It has previously been sho...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/0300-9084(93)90032-n
更新日期:1993-01-01 00:00:00
abstract::The thrombin-binding DNA aptamer (TBA) 5'-d(GGTTGGTGTGGTTGG)-3' forms a G-quadruplex that is necessary for binding to the coagulation factor thrombin. The stability of the G-quadruplex of TBA when bound to thrombin and potassium ion (K(+)) were investigated for the wild-type oligonucleotide and for mutants in which th...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/j.biochi.2011.03.013
更新日期:2011-08-01 00:00:00
abstract::A set of sequences can be defined by their common subsequences, and the length of these is a measure of the overall resemblance of the set. Each subsequence corresponds to a succession of symbols embedded in every sequence, following the same order but not necessarily contiguous. Determining the longest common subsequ...
journal_title:Biochimie
pub_type: 杂志文章
doi:10.1016/s0300-9084(85)80271-6
更新日期:1985-05-01 00:00:00