Investigation of taxa of the family Pasteurellaceae isolated from Syrian and European hamsters and proposal of Mesocricetibacter intestinalis gen. nov., sp. nov. and Cricetibacter osteomyelitidis gen. nov., sp. nov.

abstract：:A polyphasic taxonomic study was carried out on strain EBR-4-2T isolated from a biofilm reactor in Korea. Cells of the strain were Gram-stain-positive, non-spore-forming, non-motile and rod-shaped. Comparative 16S rRNA gene sequence studies showed the clear affiliation of this strain to the Actinobacteria, and it had ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Jin L,Ko SR,Lee CS,Ahn CY,Lee JS,Lee KC,Oh HM,Lee HG

更新日期：2017-05-01 00:00:00

abstract：:The 16S-23S rDNA spacer regions of two Pectinatus species, two Zymophilus species and one Selenomonas species were cloned after PCR amplification. The results of PCR amplification showed that these species had two types of spacer regions which differ in molecular size (long and short). Only the long spacer regions in ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Motoyama Y,Ogata T

更新日期：2000-03-01 00:00:00

abstract：:A Gram-stain-positive, rod-shaped (0.3-0.4×1.2-2.0 µm), strictly aerobic and beige-pigmented bacterium, designated B3227T, was isolated from the sediment of a sea cucumber culture pond in Rongcheng, China (122.2° E 36.9° N). Its biochemical characteristics analysis revealed that the cells of this bacterium were catala...

journal_title：International journal of systematic and evolutionary microbiology

authors： He RH,Liu ZW,Yan YQ,Du ZJ

更新日期：2020-02-01 00:00:00

abstract：:A Gram-stain-positive, rod-shaped, endospore-forming, aerobic bacterium (FJAT-14571(T)) was isolated from a soil sample in Taiwan. Strain FJAT-14571(T) grew at 20-40 °C (optimum 35 °C), pH 6-10 (optimum pH 8) and 0-2% (w/v) NaCl (optimum 0%). Phylogenetic analyses based on 16S rRNA gene sequences showed that strain FJ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liu B,Liu GH,Sengonca C,Schumann P,Wang MK,Xiao RF,Zheng XF,Chen Z

更新日期：2015-07-01 00:00:00

abstract：:A polyphasic approach was used to characterize a Gram-staining negative bacterium (designated strain CC-YHH650T) isolated from agarwood chips. Strain CC-YHH650T was aerobic and rod-shaped, able to grow at 15-37 °C (optimal 30 °С), pH 6.0-8.0 (optimal 7.0) and 0-1 % (w/v) NaCl (optimal 0 %). Phylogenetic analysis based...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lin SY,Hameed A,Hsu YH,Liu YC,Lai WA,Young CC

更新日期：2017-09-01 00:00:00

abstract：:Three Gram-positive, rod- or coccoid-shaped bacterial strains, KSL-2(T), KSL-5 and KSL-6, were isolated from an alkaline soil in Korea and subjected to a polyphasic taxonomical analysis. These isolates grew optimally at pH 9.0 and 30 degrees C. They were characterized chemotaxonomically as having cell wall peptidoglyc...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yoon JH,Kim IG,Lee MH,Oh TK

更新日期：2005-07-01 00:00:00

abstract：:A bacterial strain, designated 4GSKXT, isolated from the forest soil of Dinghushan Biosphere Reserve, Guangdong Province, PR China (112° 31' E 23° 10' N), is proposed as a novel species of the genus Acidicapsa. Cells of strain 4GSKXT were aerobic, non-motile, Gram-stain-negative short rods that multiplied by binary di...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ou-Yang TN,Xia F,Qiu LH

更新日期：2018-07-01 00:00:00

abstract：:In 1911, Sir Arnold Theiler isolated and described a parasite that was very similar to Anaplasma marginale but which was more centrally located within the erythrocytes of the host cells, and was much less pathogenic than A. marginale. He named the parasite A. marginale variety centrale. The name Anaplasma centrale, re...

journal_title：International journal of systematic and evolutionary microbiology

authors： Khumalo ZTH,Brayton KA,Collins NE,Chaisi ME,Quan M,Oosthuizen MC

更新日期：2018-08-01 00:00:00

abstract：:A novel filamentous bacterium, strain SCSIO 10219(T), was isolated from a sediment sample collected from the South China Sea (113° 3.752' E 18° 1.722' N) at a depth of 2105 m. Growth was observed at 25-35 °C (optimum 30 °C) and pH 5.0-8.0 (optimum pH 6.0-7.0). The organism formed yellow-white colonies with radial wrin...

journal_title：International journal of systematic and evolutionary microbiology

authors： Li J,Zhang GT,Yang J,Tian XP,Wang FZ,Zhang CS,Zhang S,Li WJ

更新日期：2012-06-01 00:00:00

abstract：:A novel actinobacterial strain, designated Z1027T, was isolated from a soil sample collected near the Tuotuo River, Qinghai-Tibet Plateau (China). The strain exhibited antibacterial activity against Escherichia coli and Staphylococcus aureus. The taxonomic position of strain Z1027T was determined using a polyphasic ap...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang B,Tang S,Chen X,Zhang L,Zhang G,Zhang W,Liu G,Chen T,Li S,Dyson P

更新日期：2016-12-01 00:00:00

abstract：:Three aerobic, rod-shaped actinobacterial strains, designated MMS17-SY117T, MMS17-SY207-3T and MMS17-SY213T, were isolated from soil and their taxonomic positions were analysed using a polyphasic approach. The isolates showed best growth at 30 °C, pH 7 and 0-1 % (w/v) NaCl. On the basis of 16S rRNA gene sequence simil...

journal_title：International journal of systematic and evolutionary microbiology

authors： Roh SG,Lee C,Kim MK,Kang HJ,Kim YS,Kim MJ,Malik A,Kim SB

更新日期：2020-04-01 00:00:00

abstract：:Flavobacteria are emerging as an important group of organisms associated with the degradation of complex organic matter in aquatic environments. A novel Gram-reaction-negative, heterotrophic, rod-shaped, aerobic, yellow-pigmented and gliding bacterium, strain SCB36T, was isolated from a protein-enriched seawater sampl...

journal_title：International journal of systematic and evolutionary microbiology

authors： Pinhassi J,Nedashkovskaya OI,Hagström A,Vancanneyt M

更新日期：2009-09-01 00:00:00

abstract：:A sponge-associated strain, KMM 7019T, was investigated in a polyphasic taxonomic study. The bacterium was strictly aerobic, heterotrophic, Gram-negative, yellow-pigmented, motile by gliding and oxidase-, catalase-, beta-galactosidase- and alkaline phosphatase-positive. A phylogenetic analysis based on 16S rRNA gene s...

journal_title：International journal of systematic and evolutionary microbiology

authors： Nedashkovskaya OI,Kim SB,Vancanneyt M,Shin DS,Lysenko AM,Shevchenko LS,Krasokhin VB,Mikhailov VV,Swings J,Bae KS

更新日期：2006-04-01 00:00:00

abstract：:Two strains representing a novel species of the genus Saturnispora were isolated from rotting wood samples collected in an Atlantic Rainforest site in Brazil. Analyses of the sequences of the D1/D2 domains of the rRNA gene showed that this novel species belongs to a subclade in the Saturnispora clade formed by Saturni...

journal_title：International journal of systematic and evolutionary microbiology

authors： Morais CG,Lara CA,Borelli BM,Cadete RM,Moreira JD,Lachance MA,Rosa CA

更新日期：2016-10-01 00:00:00

abstract：:A Gram-positive, slightly acid-alcohol-fast, carbon monoxide-oxidizing bacterium, strain Y2(T), was isolated from a soil sample collected from a roadside in Seoul, Korea. On the basis of 16S rRNA gene sequence comparative analyses, strain Y2(T) was shown to belong to the genus Tsukamurella and was most closely related...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park SW,Kim SM,Park ST,Kim YM

更新日期：2009-06-01 00:00:00

abstract：:Four obligately anaerobic, thermophilic, sulfate-reducing bacterial strains, designated TGE-P1(T), TDV(T), TGL-LS1 and TSL-P1, were isolated from thermophilic (operated at 55 degrees C) methanogenic sludges from waste and wastewater treatment. The optimum temperature for growth of all the strains was in the range 55-6...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sekiguchi Y,Muramatsu M,Imachi H,Narihiro T,Ohashi A,Harada H,Hanada S,Kamagata Y

更新日期：2008-11-01 00:00:00

abstract：:Two yeast strains (TM2-16 and PT1-17(T)) were isolated by membrane filtration from samples of estuarine water collected from two mangrove forests, in Khao Lumpee-Haad Thaimueang National Park and Mu Ko Ra-Ko Prathong National Park, Phang-Nga Province, Thailand. Analysis of the D1/D2 domain of the large-subunit rDNA se...

journal_title：International journal of systematic and evolutionary microbiology

authors： Limtong S,Youngmanitchai W,Kawasaki H,Seki T

更新日期：2008-02-01 00:00:00

abstract：:Two strains, 8-4-E12(T) and 8-4-E13(T), were isolated from a biowaste composting reactor. Based on 16S rRNA gene sequences, both strains belong to the genus Bacillus. Strain 8-4-E12(T) was most closely related to the type strains of Bacillus shackletonii, B. acidicola, B. sporothermodurans and B. oleronius (96.4, 96.3...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kosowski K,Schmidt M,Pukall R,Hause G,Kämpfer P,Lechner U

更新日期：2014-01-01 00:00:00

abstract：:Two bacterial strains, Fuji 18-1(T) and Fuji 23-1(T), were isolated from the blood of the small Japanese field mouse (Apodemus argenteus) and the large Japanese field mouse (Apodemus speciosus), respectively, specimens of which were captured in the forest of Mount Fuji, Japan. Phenotypic characterization (growth condi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Inoue K,Kabeya H,Shiratori H,Ueda K,Kosoy MY,Chomel BB,Boulouis HJ,Maruyama S

更新日期：2010-04-01 00:00:00

abstract：:A novel chemolithoautotrophic and hyperthermophilic member of the genus Ignicoccus was isolated from a submarine hydrothermal system at the Kolbeinsey Ridge, to the north of Iceland. The new isolate showed high similarity to the two species described to date, Ignicoccus islandicus and Ignicoccus pacificus, in its phys...

journal_title：International journal of systematic and evolutionary microbiology

authors： Paper W,Jahn U,Hohn MJ,Kronner M,Näther DJ,Burghardt T,Rachel R,Stetter KO,Huber H

更新日期：2007-04-01 00:00:00

abstract：:Endospore-forming bacteria were recovered from individual packages from different processing lines in a dairy plant during a tenacious periodical contamination of their UHT-milk production. Two colony types were seen, one of which was identified as Bacillus sporothermodurans. Analysis of the 16S rRNA gene of the secon...

journal_title：International journal of systematic and evolutionary microbiology

authors： Scheldeman P,Goossens K,Rodriguez-Diaz M,Pil A,Goris J,Herman L,De Vos P,Logan NA,Heyndrickx M

更新日期：2004-05-01 00:00:00

abstract：:A collection of 106 Photobacterium damselae subsp. piscicida strains and 19 Photobacterium damselae subsp. damselae strains, including reference and type strains, were genetically characterized using AFLP. The total genomic DNA of each bacterial strain was digested using restriction endonucleases HindIII and TaqI. Usi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Thyssen A,Van Eygen S,Hauben L,Goris J,Swings J,Ollevier F

更新日期：2000-05-01 00:00:00

abstract：:Unikaryotic enteromonads and diplokaryotic diplomonads have been regarded as closely related protozoan groups. It has been proposed that diplomonads originated within enteromonads in a single event of karyomastigont duplication. This paper presents the first study to address these questions using molecular phylogeneti...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kolisko M,Cepicka I,Hampl V,Kulda J,Flegr J

更新日期：2005-07-01 00:00:00

abstract：:Two Gram-stain-negative, catalase- and oxidase-positive, facultative anaerobic and rod-shaped motile bacteria, designated strains BEI176T and BEI207T, were isolated from seawater collected in the East China Sea. Phylogenetic analysis based on 16S rRNA gene sequences showed that strains BEI176T and BEI207T belonged to ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Li B,Li Y,Liu R,Xue C,Zhu X,Tian X,Wang X,Liang J,Zheng Y,Zhang XH

更新日期：2020-01-01 00:00:00

abstract：:Two Gram-positive or Gram-variable, endospore-forming, moderately halophilic rods (strains TF-11(T) and TF-12(T)) were isolated from a tidal flat of the Yellow Sea in Korea and were subjected to a polyphasic taxonomic study. Strains TF-11(T) and TF-12(T) had cell-wall peptidoglycan based on meso-diaminopimelic acid. T...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yoon JH,Kim IG,Kang KH,Oh TK,Park YH

更新日期：2003-09-01 00:00:00

abstract：:A new Pseudomonas species, for which the name Pseudomonas plecoglossicida is proposed, was isolated from cultured ayu (Plecoglossus altivelis) with bacterial haemorrhagic ascites. The causative agent was similar to Pseudomonas putida biovar A in its phenotypic characteristics and on the basis of 16S rRNA gene sequence...

journal_title：International journal of systematic and evolutionary microbiology

authors： Nishimori E,Kita-Tsukamoto K,Wakabayashi H

更新日期：2000-01-01 00:00:00

abstract：:A novel Gram-positive, anaerobic and thermophilic bacterium, strain MET79(T), was isolated from an oil well located in the Gulf of Mexico. Cells were straight rods, motile by a subpolar flagellum. Spores were formed in old cultures. Inner gas vacuoles swelled the cells when exposed to air. The optimum growth condition...

journal_title：International journal of systematic and evolutionary microbiology

authors： Miranda-Tello E,Fardeau ML,Sepúlveda J,Fernández L,Cayol JL,Thomas P,Ollivier B

更新日期：2003-09-01 00:00:00

abstract：:We performed a comparative genomic analysis to clarify the taxonomic relationship between the two Enterobacter species, Enterobacter tabaci and Enterobacter mori. Whole genome sequences of types strains of the two species became available recently. Average nucleotide identity (ANI) and in silico DNA-DNA hybridization ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wu W,Zong Z

更新日期：2020-02-01 00:00:00

abstract：:An oval to rod-shaped, Gram-stain-negative, phototrophic bacterium, strain JA738(T), was isolated from a sediment sample collected from a pink pond. Strain JA738(T) was non-motile and had vesicular-type intracellular photosynthetic membranes. Bacteriochlorophyll a and carotenoids of the spheroidene series were present...

journal_title：International journal of systematic and evolutionary microbiology

authors： Srinivas A,Rahul K,Ramaprasad EVV,Sasikala C,Ramana CV

更新日期：2012-10-01 00:00:00

abstract：:16S rRNA gene sequenced-based phylogeny indicates that Rhizobacter dauci ATCC 43778(T) branches within the radiation of Methylibium type strains. A comparative chemotaxonomic study including fatty acid methyl esters, polar lipids and polyamines reveals significant differences that, in combination with the topology of ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Stackebrandt E,Verbarg S,Frühling A,Busse HJ,Tindall BJ

更新日期：2009-10-01 00:00:00