Janibacter indicus sp. nov., isolated from hydrothermal sediment of the Indian Ocean.

Abstract:

:A Gram-staining-positive, aerobic and non-motile strain, 0704P10-1(T), was isolated from hydrothermal sediment of the Indian Ocean. Phylogenetic, phenotypic and chemotaxonomic data for the organism supported that it belonged to the genus Janibacter. Strain 0704P10-1(T) showed 97.2-98.7% 16S rRNA gene sequence similarities to the type strains of recognized members of the genus Janibacter. It contained meso-diaminopimelic acid as the diagnostic diamino acid in the cell wall. MK-8(H4) was the only menaquinone detected. The major fatty acids were iso-C16 : 0, C17 : 1ω8c and 10-methyl C17 : 0. Meanwhile, the results of DNA-DNA hybridization studies and other physiological and biochemical tests allowed the genotypic and phenotypic differentiation of strain 0704P10-1(T) from closely related species. Thus, strain 0704P10-1(T) represents a novel species of the genus Janibacter, for which the name Janibacter indicus sp. nov. is proposed. The type strain is 0704P10-1(T) ( = LMG 27493(T) = CGMCC 1.12511(T)).

authors

Zhang G,Ren H,Wang S,Chen X,Yang Y,Zhang Y,Jiang Y

doi

10.1099/ijs.0.059527-0

subject

Has Abstract

pub_date

2014-07-01 00:00:00

pages

2353-2357

issue

Pt 7

eissn

1466-5026

issn

1466-5034

journal_volume

64

pub_type

杂志文章
  • Simulacricoccus ruber gen. nov., sp. nov., a microaerotolerant, non-fruiting, myxospore-forming soil myxobacterium and emended description of the family Myxococcaceae.

    abstract::A non-fruiting group of myxobacteria was previously speculated to exist in nature based on metagenomics data containing uncultured members of the order Myxococcales. Here, we describe a myxobacterial strain, designated MCy10636T, which was isolated from a German soil sample collected in 2013. It exhibits swarming char...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002936

    authors: Garcia R,Müller R

    更新日期:2018-10-01 00:00:00

  • Haloarchaeobius salinus sp. nov., isolated from an inland salt lake, and emended description of the genus Haloarchaeobius.

    abstract::The halophilic archaeal strain, YC82(T), was isolated from Yuncheng salt lake in Shanxi, PR China. Cells from strain YC82(T) were Gram-stain negative, pleomorphic rods, which lysed in distilled water and formed light-red colonies on solid media. Strain YC82(T) grew at 25-50 °C (optimum 37 °C), in 1.4-4.8 M NaCl (optim...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000038

    authors: Yuan PP,Zhang WJ,Han D,Cui HL

    更新日期:2015-03-01 00:00:00

  • Zavarzinia aquatilis sp. nov., isolated from a freshwater river.

    abstract::A Gram-stain-negative, strictly aerobic, catalase-positive and oxidase-positive bacterium, designated strain HR-AST, was isolated from a water sample of the Han River located in the Republic of Korea. Cells were motile rods with a polar flagellum. Growth was observed at 5-35 °C (optimum of 25 °C) and pH 6-8 (optimum o...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003214

    authors: Lee Y,Park HY,Jeon CO

    更新日期:2019-03-01 00:00:00

  • Kitasatospora sampliensis sp. nov., a novel actinobacterium isolated from soil of a sugar-cane field in India.

    abstract::Polyphasic characterization of an actinomycete strain VT-36(T) isolated from a sugar-cane field soil sample collected in Punjab State, India, revealed that the strain belongs to the genus Kitasatospora. The strain's chemotaxonomic characters and G+C content of DNA (76.5 mol%) were typical of members of the genus. Anal...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63836-0

    authors: Mayilraj S,Krishnamurthi S,Saha P,Saini HS

    更新日期:2006-03-01 00:00:00

  • Salinarimonas rosea gen. nov., sp. nov., a new member of the alpha-2 subgroup of the Proteobacteria.

    abstract::A Gram-negative, rod-shaped, facultatively anaerobic, halotolerant bacterial strain, designated YIM YD3(T), was isolated from a salt mine in Yunnan, south-west China. The taxonomy of strain YIM YD3(T) was investigated by a polyphasic approach. Strain YIM YD3(T) was motile, formed pink colonies and was positive for cat...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.006981-0

    authors: Liu JH,Wang YX,Zhang XX,Wang ZG,Chen YG,Wen ML,Xu LH,Peng Q,Cui XL

    更新日期:2010-01-01 00:00:00

  • Streptomyces venetus sp. nov., an actinomycete with a blue aerial mycelium.

    abstract::A Gram-positive bacterium, designated CMU-AB225T, was isolated from rhizosphere soil of an oil palm (Elaeis guineensis). The strain exhibited a blue aerial spore mass and a light cream to moderate yellow substrate mycelium and formed chains of spiny spores. Whole-cell hydrolysates consisted of ll-diaminopimelic acid, ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002995

    authors: Sujarit K,Kudo T,Ohkuma M,Pathom-Aree W,Lumyong S

    更新日期:2018-10-01 00:00:00

  • Polyphasic re-examination of Yarrowia lipolytica strains and the description of three novel Candida species: Candida oslonensis sp. nov., Candida alimentaria sp. nov. and Candida hollandica sp. nov.

    abstract::The type strain of Yarrowia lipolytica and 38 strains identified as Yarrowia lipolytica, four strains of Candida deformans, including the type and two subcultures of the type, two strains of Candida galli and six unidentified strains that resembled Y. lipolytica were examined by PCR fingerprints using primers M13 and ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65200-0

    authors: Knutsen AK,Robert V,Poot GA,Epping W,Figge M,Holst-Jensen A,Skaar I,Smith MT

    更新日期:2007-10-01 00:00:00

  • Sphingomonas yabuuchiae sp. nov. and Brevundimonas nasdae sp. nov., isolated from the Russian space laboratory Mir.

    abstract::On the basis of phenotypic and genotypic characteristics and 16S rRNA gene sequence analysis, novel species belonging to the genera Sphingomonas and Brevundimonas were identified from samples taken from the Russian space laboratory Mir. Strain A1-18(T) was isolated from the air. 16S rDNA sequence analysis showed that ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02829-0

    authors: Li Y,Kawamura Y,Fujiwara N,Naka T,Liu H,Huang X,Kobayashi K,Ezaki T

    更新日期:2004-05-01 00:00:00

  • Mycobacterium paragordonae sp. nov., a slowly growing, scotochromogenic species closely related to Mycobacterium gordonae.

    abstract::A previously undescribed, slowly growing, scotochromogenic mycobacterial strain (49061(T)) was isolated from a patient with pulmonary infections during the hsp65-sequence-based identification of Korean clinical isolates. Its 16S rRNA gene sequence was unique and the phylogenetic analysis based on 16S rRNA gene sequenc...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.051540-0

    authors: Kim BJ,Hong SH,Kook YH,Kim BJ

    更新日期:2014-01-01 00:00:00

  • Arthrobacter deserti sp. nov., isolated from a desert soil sample.

    abstract::A Gram-stain-positive, non-motile, rod-shaped, catalase-positive and oxidase-negative bacterium, designated YIM CS25T, was isolated from a soil sample collected from Turpan desert in Xinjiang Uyghur Autonomous Region, north-western China. The isolate grew at 15-40 °C, at pH 6.0-8.0 and with 0-6 % (w/v) NaCl. The phylo...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000986

    authors: Hu QW,Chu X,Xiao M,Li CT,Yan ZF,Hozzein WN,Kim CJ,Zhi XY,Li WJ

    更新日期:2016-05-01 00:00:00

  • Pseudogulbenkiania gefcensis sp. nov., isolated from soil.

    abstract::A novel strain, yH16, was isolated on nutrient agar from soil samples collected at KyungHee University, Suwon City, Republic of Korea. Cells of strain yH16(T) were short rods, Gram-negative-staining, motile and non-spore-forming, with a polar flagellum. Biochemical and molecular characterization revealed that this str...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.040873-0

    authors: Lee DG,Im DM,Kang H,Yun P,Park SK,Hyun SS,Hwang DY

    更新日期:2013-01-01 00:00:00

  • Thermocatellispora soli sp. nov., isolated from hot spring soil.

    abstract::An aerobic, spore-forming, actinomycete, designated strain CHM3-46T, was isolated from soil in a hot spring pond located in Chiangmai province, Thailand. The strain exhibited taxonomic characteristics consistent with the genus Thermocatellispora. Strain CHM3-46T produced short, straight chains of warty spores on aeria...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003115

    authors: Duangupama T,Pittayakhajonwut P,Thawai C

    更新日期:2019-01-01 00:00:00

  • Cecembia calidifontis sp. nov., isolated from a hot spring runoff, and emended description of the genus Cecembia.

    abstract::Two red-pigmented isolates, designated RQ-33(T) and TU-13, were recovered from hot spring runoffs on the Island of São Miguel in the Azores, Portugal. These organisms have an optimum growth temperature of approximately 45 °C and an optimum pH for growth between 7.5 and 8.5. Based on 16S rRNA gene sequence analysis, th...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.044537-0

    authors: Albuquerque L,Tiago I,Nobre MF,Veríssimo A,da Costa MS

    更新日期:2013-04-01 00:00:00

  • Construction of an interactive online phytoplasma classification tool, iPhyClassifier, and its application in analysis of the peach X-disease phytoplasma group (16SrIII).

    abstract::Phytoplasmas, the causal agents of numerous plant diseases, are insect-vector-transmitted, cell-wall-less bacteria descended from ancestral low-G+C-content Gram-positive bacteria in the Bacillus-Clostridium group. Despite their monophyletic origin, widely divergent phytoplasma lineages have evolved in adaptation to sp...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.010249-0

    authors: Zhao Y,Wei W,Lee IM,Shao J,Suo X,Davis RE

    更新日期:2009-10-01 00:00:00

  • Dietzia psychralcaliphila sp. nov., a novel, facultatively psychrophilic alkaliphile that grows on hydrocarbons.

    abstract::A novel, facultatively psychrophilic alkaliphile that grows on a chemically defined medium containing n-alkanes as the sole carbon source was isolated from a drain of a fish product-processing plant. The isolate was an aerobic, non-motile, gram-positive bacterium. The bacterium was catalase-positive and oxidase-negati...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-1-85

    authors: Yumoto I,Nakamura A,Iwata H,Kojima K,Kusumoto K,Nodasaka Y,Matsuyama H

    更新日期:2002-01-01 00:00:00

  • Bacteroides intestinalis sp. nov., isolated from human faeces.

    abstract::During studies of the microbiota of human faeces, five strains of Gram-negative anaerobic rods were isolated following growth in a polyamine-deficient medium. These strains belonged to the genus Bacteroides on the basis of 16S rRNA gene sequence data. 16S rRNA gene sequence similarity between one of the strains, 341T,...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63914-0

    authors: Bakir MA,Kitahara M,Sakamoto M,Matsumoto M,Benno Y

    更新日期:2006-01-01 00:00:00

  • Bryobacter aggregatus gen. nov., sp. nov., a peat-inhabiting, aerobic chemo-organotroph from subdivision 3 of the Acidobacteria.

    abstract::Bryobacter aggregatus gen. nov., sp. nov. is proposed to accommodate three strains of slowly growing, chemo-organotrophic bacteria isolated from acidic Sphagnum peat bogs. These bacteria were strictly aerobic, Gram-negative, colourless, non-motile coccoids or short rods that multiplied by normal cell division and form...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.013250-0

    authors: Kulichevskaya IS,Suzina NE,Liesack W,Dedysh SN

    更新日期:2010-02-01 00:00:00

  • Polaribacter haliotis sp. nov., isolated from the gut of abalone Haliotis discus hannai.

    abstract::A Gram-stain-negative, aerobic, non-motile and coccoid, ovoid or rod-shaped bacterial strain, designated RA4-7T, was isolated from the gut of an abalone (Haliotis discus hannai) collected from the sea around Jeju island, South Korea, and subjected to a polyphasic taxonomic study. RA4-7T grew optimally at 25 °C, at pH ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001557

    authors: Kim YO,Park IS,Park S,Nam BH,Park JM,Kim DG,Yoon JH

    更新日期:2016-12-01 00:00:00

  • Halococcus hamelinensis sp. nov., a novel halophilic archaeon isolated from stromatolites in Shark Bay, Australia.

    abstract::Several halophilic archaea belonging to the genus Halococcus were isolated from stromatolites from Hamelin Pool, Shark Bay, Western Australia, collected during field trips in 1996 and 2002. This is the first incidence of halophilic archaea being isolated from this environment. Stromatolites are biosedimentary structur...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64180-0

    authors: Goh F,Leuko S,Allen MA,Bowman JP,Kamekura M,Neilan BA,Burns BP

    更新日期:2006-06-01 00:00:00

  • Recommended rejection of the names Malacoplasma gen. nov., Mesomycoplasma gen. nov., Metamycoplasma gen. nov., Metamycoplasmataceae fam. nov., Mycoplasmoidaceae fam. nov., Mycoplasmoidales ord. nov., Mycoplasmoides gen. nov., Mycoplasmopsis gen. nov. [Gup

    abstract::The consensus of the members of the International Committee on Systematics of Prokaryotes' Subcommittee on the taxonomy of Mollicutes is that recently proposed sweeping changes to nomenclature of members of the Mycoplasmatales, specifically involving introduction of the names Malacoplasma gen. nov., Mesomycoplasma gen...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003632

    authors: Balish M,Bertaccini A,Blanchard A,Brown D,Browning G,Chalker V,Frey J,Gasparich G,Hoelzle L,Knight T,Knox C,Kuo CH,Manso-Silván L,May M,Pollack JD,Ramírez AS,Spergser J,Taylor-Robinson D,Volokhov D,Zhao Y

    更新日期:2019-11-01 00:00:00

  • Classification of three corynebacterial strains isolated from the Northern Bald Ibis (Geronticus eremita): proposal of Corynebacterium choanae sp. nov., Corynebacterium pseudopelargi sp. nov., and Corynebacterium gerontici sp. nov.

    abstract::Three Gram-stain-positive, rod-to-coccoid-shaped, catalase-positive and non-motile bacterial strains isolated from the choanae of a Northern bald ibis, designated strains 200CHT, W8T and 812CHT, respectively, were subjected to comprehensive taxonomic characterization. The three strains were oxidase-negative. The 16S r...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003580

    authors: Busse HJ,Kleinhagauer T,Glaeser SP,Spergser J,Kämpfer P,Rückert C

    更新日期:2019-09-01 00:00:00

  • Halodesulfovibrio spirochaetisodalis gen. nov. sp. nov. and reclassification of four Desulfovibrio spp.

    abstract::An antibiotic-producing, obligate anaerobic, Gram-stain-negative, catalase- and oxidase-negative strain (JC271T) was isolated from a marine habitat and identified, based on 16S rRNA gene sequence analysis, as a novel member of the family Desulfovibrionaceae. The closest phylogenetic relatives of strain JC271T were fou...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001574

    authors: Shivani Y,Subhash Y,Sasikala C,Ramana CV

    更新日期:2017-01-01 00:00:00

  • Oleispira antarctica gen. nov., sp. nov., a novel hydrocarbonoclastic marine bacterium isolated from Antarctic coastal sea water.

    abstract::The taxonomic characteristics of two bacterial strains, RB-8(T) and RB-9, isolated from hydrocarbon-degrading enrichment cultures obtained from Antarctic coastal marine environments (Rod Bay, Ross Sea), were determined. These bacteria were psychrophilic, aerobic and Gram-negative with polar flagella. Growth was not ob...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02366-0

    authors: Yakimov MM,Giuliano L,Gentile G,Crisafi E,Chernikova TN,Abraham WR,Lünsdorf H,Timmis KN,Golyshin PN

    更新日期:2003-05-01 00:00:00

  • Flavobacterium macrobrachii sp. nov., isolated from a freshwater shrimp culture pond.

    abstract::A bacterial strain, designated an-8(T), was isolated from a freshwater shrimp culture pond in Taiwan and characterized using a polyphasic taxonomic approach. Cells of strain an-8(T) were Gram-reaction-negative, aerobic, rod-shaped and non-motile, formed yellow-pigmented colonies and grew at 15-30 °C (optimum 25 °C), p...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.025403-0

    authors: Sheu SY,Chiu TF,Young CC,Arun AB,Chen WM

    更新日期:2011-06-01 00:00:00

  • Deinococcus aerolatus sp. nov. and Deinococcus aerophilus sp. nov., isolated from air samples.

    abstract::Two strains of pink-coloured bacteria, 5516T-9(T) and 5516T-11(T), were isolated from an air sample collected in Korea. The taxonomic status of these novel strains was investigated by means of a polyphasic approach. The novel strains were Gram-positive, aerobic, non-spore-forming and coccus-shaped bacteria. The DNA G+...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.016030-0

    authors: Yoo SH,Weon HY,Kim SJ,Kim YS,Kim BY,Kwon SW

    更新日期:2010-05-01 00:00:00

  • Lactobacillus arizonensis sp. nov., isolated from jojoba meal.

    abstract::Five strains of simmondsin-degrading, lactic-acid-producing bacteria were isolated from fermented jojoba meal. These isolates were facultatively anaerobic, gram-positive, non-motile, non-spore-forming, homofermentative, rod-shaped organisms. They grew singly and in short chains, produced lactic acid but no gas from gl...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-50-5-1803

    authors: Swezey JL,Nakamura LK,Abbott TP,Peterson RE

    更新日期:2000-09-01 00:00:00

  • Parvibaculum lavamentivorans gen. nov., sp. nov., a novel heterotroph that initiates catabolism of linear alkylbenzenesulfonate.

    abstract::Strain DS-1T is a small (0.8 microm in length and 0.2 microm in diameter) heterotrophic bacterium able to omega-oxygenate the commercial surfactant linear alkylbenzenesulfonate (LAS) and shorten the side chain by beta-oxidation to yield sulfophenylcarboxylates. The morphotype is widespread in cultures able to utilize ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.03020-0

    authors: Schleheck D,Tindall BJ,Rosselló-Mora R,Cook AM

    更新日期:2004-09-01 00:00:00

  • Sphingoaurantiacus capsulatus sp. nov., isolated from mountain soil, and emended description of the genus Sphingoaurantiacus.

    abstract::A novel Gram-stain-negative, strictly aerobic, non-motile, rod-shaped, capsule-forming bacterium, designated strain YLT33T, that formed orange-red colonies was isolated from mountain cliff soil from Enshi Grand Canyon, southwest China. Growth occurred at 4-35 °C (optimum 28 °C) and at pH 6.0-10.0 (optimum 7.0). It sho...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001447

    authors: Tan Y,Wang Y,Wang D,Wang G,Zheng S

    更新日期:2016-12-01 00:00:00

  • Streptomyces zinciresistens sp. nov., a zinc-resistant actinomycete isolated from soil from a copper and zinc mine.

    abstract::A filamentous actinomycete, designated strain CCNWNQ 0016(T), was isolated from soil from a zinc and copper mine in Shaanxi province, north-western China. A polyphasic taxonomic study was carried out to establish the status of strain CCNWNQ 0016(T). Chemical and morphological properties of the isolate were similar to ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.024018-0

    authors: Lin YB,Wang XY,Li HF,Wang NN,Wang HX,Tang M,Wei GH

    更新日期:2011-03-01 00:00:00

  • Balneicella halophila gen. nov., sp. nov., an anaerobic bacterium, isolated from a thermal spring and description of Balneicellaceae fam. nov.

    abstract::A mesophilic anaerobic bacterium, designated KHALHBd91T was isolated from the moderately hot spring of Hammam Biadha, Tunisia. The strain was Gram-staining-negative, non-sporulating, non-motile and rod-shaped, appearing singly (0.5-2.0×0.5-1 µm). It grew anaerobically at temperatures between 20 and 50 °C (optimum 37 °...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001412

    authors: Fadhlaoui K,Ben Hania W,Postec A,Hamdi M,Ollivier B,Fardeau ML

    更新日期:2016-11-01 00:00:00