PyClone: statistical inference of clonal population structure in cancer.

Abstract:

:We introduce PyClone, a statistical model for inference of clonal population structures in cancers. PyClone is a Bayesian clustering method for grouping sets of deeply sequenced somatic mutations into putative clonal clusters while estimating their cellular prevalences and accounting for allelic imbalances introduced by segmental copy-number changes and normal-cell contamination. Single-cell sequencing validation demonstrates PyClone's accuracy.

journal_name

Nat Methods

journal_title

Nature methods

authors

Roth A,Khattra J,Yap D,Wan A,Laks E,Biele J,Ha G,Aparicio S,Bouchard-Côté A,Shah SP

doi

10.1038/nmeth.2883

subject

Has Abstract

pub_date

2014-04-01 00:00:00

pages

396-8

issue

4

eissn

1548-7091

issn

1548-7105

pii

nmeth.2883

journal_volume

11

pub_type

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