Abstract:
:De novo sequencing is a popular technique in proteomics for identifying peptides from tandem mass spectra without having to rely on a protein sequence database. Despite the strong potential of de novo sequencing algorithms, their adoption threshold remains quite high. We here present a user-friendly and lightweight graphical user interface called DeNovoGUI for running parallelized versions of the freely available de novo sequencing software PepNovo+, greatly simplifying the use of de novo sequencing in proteomics. Our platform-independent software is freely available under the permissible Apache2 open source license. Source code, binaries, and additional documentation are available at http://denovogui.googlecode.com .
journal_name
J Proteome Resjournal_title
Journal of proteome researchauthors
Muth T,Weilnböck L,Rapp E,Huber CG,Martens L,Vaudel M,Barsnes Hdoi
10.1021/pr4008078subject
Has Abstractpub_date
2014-02-07 00:00:00pages
1143-6issue
2eissn
1535-3893issn
1535-3907journal_volume
13pub_type
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