Abstract:
:A study was undertaken of the various factors affecting the recovery of heterotrophic bacteria from marine sediments. The dilution medium and culture medium were found to be of great importance in the recovery of heterotrophic colony forming units (CFU). Statistical analysis of the total viable counts obtained under the test conditions showed that artificial seawater (ASW) without further supplementation was equal to or superior to ASW plus 0.1% peptone or ASW plus 0.1% peptone and 0.1% glycerol. The addition of a surfactive agent, on the other hand, resulted in 95% inhibition of the recoverable CFU. The elapsed time (up to 12 hr) between recovery of a sedimentary core and completion of plating procedures was found to have little effect provided the sedimentary sample was removed from the core, placed in ASW, and stored in a refrigerator until actual plating occurred. It was further noted that lower organic nutrient concentrations, approximately one-tenth of those generally in use, resulted in significantly higher total viable counts. Finally, replicate contiguous sampling at three depths in a core resulted in no significant changes in the number of CFU from the surface samples, indicating a greater surface homogeneity than that previously suspected. The same pattern was not true, however, for samples obtained a lower positions in the core, thus indicating pockets of microbial concentration.
journal_name
Microb Ecoljournal_title
Microbial ecologyauthors
Litchfield CD,Rake JB,Zindulis J,Watanabe RT,Stein DJdoi
10.1007/BF02512390subject
Has Abstractpub_date
1974-12-01 00:00:00pages
219-33issue
1eissn
0095-3628issn
1432-184Xjournal_volume
1pub_type
杂志文章abstract::The role of disturbance in structuring natural microbial communities has been largely unexplored. Disturbance associated with invertebrate ingestion can reduce bacterial biomass and alter metabolic activities and compositions of bacterial assemblages in marine sediments. The primary objectives of the research presente...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-003-1031-x
更新日期:2004-08-01 00:00:00
abstract::Staphylococcus aureus, an opportunistic pathogen member of the nasal and skin microbiota, can also be found in human oral samples and has been linked to infectious diseases of the oral cavity. As the nasal and oral cavities are anatomically connected, it is currently unclear whether S. aureus can colonize the oral cav...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-018-1291-0
更新日期:2019-08-01 00:00:00
abstract::Analysis of continuous culture methodology suggests that this potentially powerful tool for kinetic analysis can be improved by minimizing several inherent shortcomings. Medium background substrates - organic carbon, phosphate, and manganese - were shown to dominate kinetic observations at concentrations below chemica...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/BF02011647
更新日期:1975-12-01 00:00:00
abstract::Didymosphenia geminata (Lyngbye) M. Schmidt is a stalked freshwater diatom that is expanding its range globally. In some rivers, D. geminata forms thick and expansive polysaccharide-dominated mats. Like other stalked diatoms, D. geminata cells attach to the substratum with a pad of adhesive extracellular polymeric sub...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-016-0816-7
更新日期:2016-10-01 00:00:00
abstract::Microcosms may potentially be used as tools for evaluating the fate and effects of genetically engineered microorganisms released into the environment. Extrapolation of data to the field, however, requires that the correspondence between microcosm and field is known. Microbial trophic interactions within the microbial...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/BF00172636
更新日期:1992-06-01 00:00:00
abstract::Interactions between bacteria and protozoa in soil were studied over 2-week periods in the field and in a pot experiment. Under natural conditions the total biological activity was temporarily synchronized by a large rainfall, and in the laboratory by the addition of water to dried-out soil, with or without plants. In...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/BF02341429
更新日期:1981-12-01 00:00:00
abstract::Abnormality and disease in sponges have been widely reported, yet how sponge-associated microbes respond correspondingly remains inconclusive. Here, individuals of the sponge Carteriospongia foliascens under abnormal status were collected from the Rabigh Bay along the Red Sea coast. Microbial communities in both healt...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-014-0419-0
更新日期:2014-10-01 00:00:00
abstract::We investigated if the plant growth promoting fungus Trichoderma harzianum Rifai 1295-22 (also known as "T22") could be used to enhance the establishment and growth of crack willow (Salix fragilis) in a soil containing no organic or metal pollutants and in a metal-contaminated soil by comparing this fungus with nonino...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-006-9203-0
更新日期:2007-08-01 00:00:00
abstract::Bisphenol A (BPA) is one of the endocrine-disrupting chemicals that are ubiquitous in aquatic environments. Biodegradation is a major way to clean up the BPA pollution in sediments. However, information on the effective BPA biodegradation in anaerobic sediments is still lacking. The present study investigated the biod...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-014-0551-x
更新日期:2015-07-01 00:00:00
abstract::The addition of ciliated protozoa to aquatic microcosms and bench-scale sewage treatment plants increases decomposition rates. This is surprising, inasmuch as protozoa consume bacteria, which are the primary decomposers. One possible mechanism of the increase in decomposition rate is the direct consumption of dissolve...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/BF02011712
更新日期:1988-03-01 00:00:00
abstract::For most mammals, including nonhuman primates, diet composition varies temporally in response to differences in food availability. Because diet influences gut microbiota composition, it is likely that the gut microbiota of wild mammals varies in response to seasonal changes in feeding patterns. Such variation may affe...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-014-0554-7
更新日期:2015-02-01 00:00:00
abstract::The original article contained mistakes in the authors' affiliations. ...
journal_title:Microbial ecology
pub_type: 已发布勘误
doi:10.1007/s00248-020-01641-3
更新日期:2020-11-20 00:00:00
abstract::A BSTRACTInterspecific fungal interactions are important ecological processes, whereas their physiological mechanisms are little understood. The aim of this work was to study how activity of fungal extracellular laccase was changed across mycelia during interactions between white- and brown-rot basidiomycetes from dif...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s002480000022
更新日期:2000-04-01 00:00:00
abstract::Geosmithia spp. (Ascomycota: Hypocreales) are little-studied, dry-spored fungi that occur in galleries built by many phloeophagous bark beetles. This study mapped the distribution and environmental preferences of Geosmithia species occurring in galleries of temperate European bark beetles. One hundred seven host tree ...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-007-9251-0
更新日期:2008-01-01 00:00:00
abstract::Simulation modeling has been an integral, albeit ad hoc, component of the field of aquatic microbial ecology for the past two decades. One of the most critical steps in simulation modeling is the initial formulation of a clear set of questions and goals. It is doubtful that a single generic model could be constructed ...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/BF00166823
更新日期:1994-09-01 00:00:00
abstract::Assimilatory nitrate reductase gene fragments were isolated from epiphytes and plankton associated with seagrass blades collected from Tampa Bay, Florida, USA. Nitrate reductase genes from diatoms (NR) and heterotrophic bacteria (nasA) were amplified by polymerase chain reaction (PCR) using two sets of degenerate prim...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-006-9175-0
更新日期:2007-11-01 00:00:00
abstract::Biotic and abiotic factors can influence interactions between microbial grazers and their prey, thus impacting both the cycling of biogenic carbon within the surface layer of the ocean and the export of carbon to the deep ocean and higher trophic levels. In this study, microcosm experiments were used to evaluate the c...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-002-1058-4
更新日期:2003-03-01 00:00:00
abstract::The oriental fruit fly, Bactrocera dorsalis (Hendel), is an important invasive agricultural insect pest with a wide host range, and has spread around the world over the last century. This evolutionary trait may have arisen primarily from interactions between B. dorsalis and other invertebrates that share the same ecol...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-020-01506-9
更新日期:2020-08-01 00:00:00
abstract::The dermis of cetaceans is in constant contact with microbial species. Although the skin of the bottlenose dolphin provides adequate defense against most disease-causing microbes, it also provides an environment for microbial community development. Microbial community uniqueness and richness associated with bottlenose...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-017-1071-2
更新日期:2018-02-01 00:00:00
abstract::A previously unknown association between a luminous bacterium, Vibrio harveyi, and a benthic hydrozoan, Aglaophenia octodonta, is described. Aglaophenia hydrocladia showed a clear fluorescence in the folds along the hydrocaulus and at the base of the hydrotheca, suggesting the presence of luminous bacteria. This hypot...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-006-9010-7
更新日期:2006-11-01 00:00:00
abstract::In dryland regions, biological soil crusts (BSCs) have numerous important ecosystem functions. Crust species and functions are, however, highly spatially heterogeneous and remain poorly understood at a range of scales. In this study, chlorophyll fluorescence imaging was used to quantify millimeter-scale patterns in th...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-019-01356-0
更新日期:2019-11-01 00:00:00
abstract::The culturable haloarchaeal diversity in a crystallizer pond from a solar saltern has been analyzed and compared with the biodiversity directly retrieved by analysis of rRNA genes amplified from the environment. Two different sets of culture conditions have been assayed: solid medium with yeast extract as carbon sourc...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s002480000069
更新日期:2001-01-01 00:00:00
abstract::Salt marshes are unique ecosystem of which a microbial community is expected to be affected by global climate change. In this study, by using T-RFLP analysis, quantitative PCR, and pyrosequencing, we comprehensively analyzed the microbial community structure responding to elevated CO2 (eCO2) and N addition in a salt m...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-017-0960-8
更新日期:2017-10-01 00:00:00
abstract::Extracellular phosphatase production by phytoplankton was investigated in the moderately eutrophic Lipno reservoir, Czech Republic during 2009 and 2010. We hypothesized that production of extracellular phosphatases is an additional mechanism of phosphorus acquisition enabling producers to survive rather than to domina...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-014-0483-5
更新日期:2015-01-01 00:00:00
abstract::This study evaluated the effect of the antiretroviral ritonavir on protease secretion in different strains of Cryptococcus neoformans isolated from the environment and investigated the expression of heat shock protein (Hsp90), classically described virulence factors in other yeast in the presence of the same antiretro...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-016-0900-z
更新日期:2017-04-01 00:00:00
abstract::Methanotrophic bacteria are able to use methane (CH4) as a sole carbon and energy source. Photochemical oxidation of methane takes place in the stratosphere, whereas in the troposphere, this process is carried out by methanotrophic bacteria. On the one hand, it is known that the efficiency of biological CH4 oxidation ...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-018-1248-3
更新日期:2019-04-01 00:00:00
abstract::The effect of salinity on prokaryotic community diversity in Abijata-Shalla Soda Ash Concentration Pond system was investigated by using high-throughput 16S rRNA gene 454 pyrosequencing. Surface water and brine samples from five sites spanning a salinity range of 3.4 % (Lake Abijata) to 32 % (SP230F, crystallizer pond...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-015-0675-7
更新日期:2016-02-01 00:00:00
abstract::We investigated the dynamics and diversity of heterotrophic bacteria, autotrophic and heterotrophic flagellates, and ciliates from March to July 2002 in the surface waters (0-50 m) of Lake Bourget. The heterotrophic bacteria consisted mainly of "small" cocci, but filaments (>2 microm), commonly considered to be grazin...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-004-0230-4
更新日期:2006-07-01 00:00:00
abstract::Ecological transformations derived from habitat fragmentation have led to increased threats to above-ground biodiversity. However, the impacts of forest fragmentation on soils and their microbial communities are not well understood. We examined the effects of contrasting fragment sizes on the structure and functioning...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-015-0584-9
更新日期:2015-05-01 00:00:00
abstract::Understanding the dynamics of plant-associated microbial communities within agriculture is well documented. However, the ecological processes that assemble the plant microbiome are not well understood. This study elucidates the relative dominance of assembly processes across plant compartments (root, stem, and leaves)...
journal_title:Microbial ecology
pub_type: 杂志文章
doi:10.1007/s00248-021-01688-w
更新日期:2021-01-18 00:00:00