Abstract:
:In Gram-positive bacteria the tRNA-dependent T box riboswitch regulates the expression of many amino acid biosynthetic and aminoacyl-tRNA synthetase genes through a transcription attenuation mechanism. The Specifier domain of the T box riboswitch contains the Specifier sequence that is complementary to the tRNA anticodon and is flanked by a highly conserved purine nucleotide that could result in a fourth base pair involving the invariant U33 of tRNA. We show that the interaction between the T box Specifier domain and tRNA consists of three Watson-Crick base pairs and that U33 confers stability to the complex through intramolecular hydrogen bonding. Enhanced packing within the Specifier domain loop E motif may stabilize the complex and contribute to cognate tRNA selection.
journal_name
FEBS Lettjournal_title
FEBS lettersauthors
Chang AT,Nikonowicz EPdoi
10.1016/j.febslet.2013.09.003subject
Has Abstractpub_date
2013-11-01 00:00:00pages
3495-9issue
21eissn
0014-5793issn
1873-3468pii
S0014-5793(13)00673-Xjournal_volume
587pub_type
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