Rapid perturbation in viremia levels drives increases in functional avidity of HIV-specific CD8 T cells.

Abstract:

:The factors determining the functional avidity and its relationship with the broad heterogeneity of antiviral T cell responses remain partially understood. We investigated HIV-specific CD8 T cell responses in 85 patients with primary HIV infection (PHI) or chronic (progressive and non-progressive) infection. The functional avidity of HIV-specific CD8 T cells was not different between patients with progressive and non-progressive chronic infection. However, it was significantly lower in PHI patients at the time of diagnosis of acute infection and after control of virus replication following one year of successful antiretroviral therapy. High-avidity HIV-specific CD8 T cells expressed lower levels of CD27 and CD28 and were enriched in cells with an exhausted phenotype, i.e. co-expressing PD-1/2B4/CD160. Of note, a significant increase in the functional avidity of HIV-specific CD8 T cells occurred in early-treated PHI patients experiencing a virus rebound after spontaneous treatment interruption. This increase in functional avidity was associated with the accumulation of PD-1/2B4/CD160 positive cells, loss of polyfunctionality and increased TCR renewal. The increased TCR renewal may provide the mechanistic basis for the generation of high-avidity HIV-specific CD8 T cells. These results provide insights on the relationships between functional avidity, viremia, T-cell exhaustion and TCR renewal of antiviral CD8 T cell responses.

journal_name

PLoS Pathog

journal_title

PLoS pathogens

authors

Viganò S,Bellutti Enders F,Miconnet I,Cellerai C,Savoye AL,Rozot V,Perreau M,Faouzi M,Ohmiti K,Cavassini M,Bart PA,Pantaleo G,Harari A

doi

10.1371/journal.ppat.1003423

subject

Has Abstract

pub_date

2013-01-01 00:00:00

pages

e1003423

issue

7

eissn

1553-7366

issn

1553-7374

pii

PPATHOGENS-D-13-00128

journal_volume

9

pub_type

杂志文章
  • Mutations in dnaA and a cryptic interaction site increase drug resistance in Mycobacterium tuberculosis.

    abstract::Genomic dissection of antibiotic resistance in bacterial pathogens has largely focused on genetic changes conferring growth above a single critical concentration of drug. However, reduced susceptibility to antibiotics-even below this breakpoint-is associated with poor treatment outcomes in the clinic, including in tub...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1009063

    authors: Hicks ND,Giffen SR,Culviner PH,Chao MC,Dulberger CL,Liu Q,Stanley S,Brown J,Sixsmith J,Wolf ID,Fortune SM

    更新日期:2020-11-30 00:00:00

  • Separate domains of G3BP promote efficient clustering of alphavirus replication complexes and recruitment of the translation initiation machinery.

    abstract::G3BP-1 and -2 (hereafter referred to as G3BP) are multifunctional RNA-binding proteins involved in stress granule (SG) assembly. Viruses from diverse families target G3BP for recruitment to replication or transcription complexes in order to block SG assembly but also to acquire pro-viral effects via other unknown func...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1007842

    authors: Götte B,Panas MD,Hellström K,Liu L,Samreen B,Larsson O,Ahola T,McInerney GM

    更新日期:2019-06-14 00:00:00

  • The herpes virus Fc receptor gE-gI mediates antibody bipolar bridging to clear viral antigens from the cell surface.

    abstract::The Herpes Simplex Virus 1 (HSV-1) glycoprotein gE-gI is a transmembrane Fc receptor found on the surface of infected cells and virions that binds human immunoglobulin G (hIgG). gE-gI can also participate in antibody bipolar bridging (ABB), a process by which the antigen-binding fragments (Fabs) of the IgG bind a vira...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1003961

    authors: Ndjamen B,Farley AH,Lee T,Fraser SE,Bjorkman PJ

    更新日期:2014-03-06 00:00:00

  • Disruption of PML nuclear bodies is mediated by ORF61 SUMO-interacting motifs and required for varicella-zoster virus pathogenesis in skin.

    abstract::Promyelocytic leukemia protein (PML) has antiviral functions and many viruses encode gene products that disrupt PML nuclear bodies (PML NBs). However, evidence of the relevance of PML NB modification for viral pathogenesis is limited and little is known about viral gene functions required for PML NB disruption in infe...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1002157

    authors: Wang L,Oliver SL,Sommer M,Rajamani J,Reichelt M,Arvin AM

    更新日期:2011-08-01 00:00:00

  • Structural and Functional Characterization of Anti-A33 Antibodies Reveal a Potent Cross-Species Orthopoxviruses Neutralizer.

    abstract::Vaccinia virus A33 is an extracellular enveloped virus (EEV)-specific type II membrane glycoprotein that is essential for efficient EEV formation and long-range viral spread within the host. A33 is a target for neutralizing antibody responses against EEV. In this study, we produced seven murine anti-A33 monoclonal ant...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1005148

    authors: Matho MH,Schlossman A,Meng X,Benhnia MR,Kaever T,Buller M,Doronin K,Parker S,Peters B,Crotty S,Xiang Y,Zajonc DM

    更新日期:2015-09-01 00:00:00

  • Targeted changes of the cell wall proteome influence Candida albicans ability to form single- and multi-strain biofilms.

    abstract::Biofilm formation is an important virulence trait of the pathogenic yeast Candida albicans. We have combined gene overexpression, strain barcoding and microarray profiling to screen a library of 531 C. albicans conditional overexpression strains (∼10% of the genome) for genes affecting biofilm development in mixed-pop...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1004542

    authors: Cabral V,Znaidi S,Walker LA,Martin-Yken H,Dague E,Legrand M,Lee K,Chauvel M,Firon A,Rossignol T,Richard ML,Munro CA,Bachellier-Bassi S,d'Enfert C

    更新日期:2014-12-11 00:00:00

  • De novo synthesis of VP16 coordinates the exit from HSV latency in vivo.

    abstract::The mechanism controlling the exit from herpes simplex virus latency (HSV) is of central importance to recurrent disease and transmission of infection, yet interactions between host and viral functions that govern this process remain unclear. The cascade of HSV gene transcription is initiated by the multifunctional vi...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1000352

    authors: Thompson RL,Preston CM,Sawtell NM

    更新日期:2009-03-01 00:00:00

  • Leishmania donovani isolates with antimony-resistant but not -sensitive phenotype inhibit sodium antimony gluconate-induced dendritic cell activation.

    abstract::The inability of sodium antimony gluconate (SAG)-unresponsive kala-azar patients to clear Leishmania donovani (LD) infection despite SAG therapy is partly due to an ill-defined immune-dysfunction. Since dendritic cells (DCs) typically initiate anti-leishmanial immunity, a role for DCs in aberrant LD clearance was inve...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1000907

    authors: Haldar AK,Yadav V,Singhal E,Bisht KK,Singh A,Bhaumik S,Basu R,Sen P,Roy S

    更新日期:2010-05-20 00:00:00

  • Red-light is an environmental effector for mutualism between begomovirus and its vector whitefly.

    abstract::Environments such as light condition influence the spread of infectious diseases by affecting insect vector behavior. However, whether and how light affects the host defense which further affects insect preference and performance, remains unclear, nor has been demonstrated how pathogens co-adapt light condition to fac...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1008770

    authors: Zhao P,Zhang X,Gong Y,Wang D,Xu D,Wang N,Sun Y,Gao L,Liu SS,Deng XW,Kliebenstein DJ,Zhou X,Fang RX,Ye J

    更新日期:2021-01-11 00:00:00

  • Cross-Species Transmission and Differential Fate of an Endogenous Retrovirus in Three Mammal Lineages.

    abstract::Endogenous retroviruses (ERVs) arise from retroviruses chromosomally integrated in the host germline. ERVs are common in vertebrate genomes and provide a valuable fossil record of past retroviral infections to investigate the biology and evolution of retroviruses over a deep time scale, including cross-species transmi...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1005279

    authors: Zhuo X,Feschotte C

    更新日期:2015-11-12 00:00:00

  • The respiratory syncytial virus polymerase has multiple RNA synthesis activities at the promoter.

    abstract::Respiratory syncytial virus (RSV) is an RNA virus in the Family Paramyxoviridae. Here, the activities performed by the RSV polymerase when it encounters the viral antigenomic promoter were examined. RSV RNA synthesis was reconstituted in vitro using recombinant, isolated polymerase and an RNA oligonucleotide template ...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1002980

    authors: Noton SL,Deflubé LR,Tremaglio CZ,Fearns R

    更新日期:2012-01-01 00:00:00

  • Identification of adipocyte plasma membrane-associated protein as a novel modulator of human cytomegalovirus infection.

    abstract::Human cytomegalovirus (HCMV) is a ubiquitous pathogen that can cause disability in newborns and serious clinical diseases in immunocompromised patients. HCMV has a large genome with enormous coding potential; its viral particles are equipped with complicated glycoprotein complexes and can infect a wide range of human ...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1007914

    authors: Ye X,Gui X,Freed DC,Ku Z,Li L,Chen Y,Xiong W,Fan X,Su H,He X,Rustandi RR,Loughney JW,Ma N,Espeseth AS,Liu J,Zhu H,Wang D,Zhang N,Fu TM,An Z

    更新日期:2019-07-29 00:00:00

  • Chaperone-Mediated Autophagy Protein BAG3 Negatively Regulates Ebola and Marburg VP40-Mediated Egress.

    abstract::Ebola (EBOV) and Marburg (MARV) viruses are members of the Filoviridae family which cause outbreaks of hemorrhagic fever. The filovirus VP40 matrix protein is essential for virus assembly and budding, and its PPxY L-domain motif interacts with WW-domains of specific host proteins, such as Nedd4 and ITCH, to facilitate...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1006132

    authors: Liang J,Sagum CA,Bedford MT,Sidhu SS,Sudol M,Han Z,Harty RN

    更新日期:2017-01-11 00:00:00

  • Host prion protein expression levels impact prion tropism for the spleen.

    abstract::Prions are pathogens formed from abnormal conformers (PrPSc) of the host-encoded cellular prion protein (PrPC). PrPSc conformation to disease phenotype relationships extensively vary among prion strains. In particular, prions exhibit a strain-dependent tropism for lymphoid tissues. Prions can be composed of several su...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1008283

    authors: Béringue V,Tixador P,Andréoletti O,Reine F,Castille J,Laï TL,Le Dur A,Laisné A,Herzog L,Passet B,Rezaei H,Vilotte JL,Laude H

    更新日期:2020-07-23 00:00:00

  • Maternal schistosomiasis impairs offspring Interleukin-4 production and B cell expansion.

    abstract::Epidemiological studies have identified a correlation between maternal helminth infections and reduced immunity to some early childhood vaccinations, but the cellular basis for this is poorly understood. Here, we investigated the effects of maternal Schistosoma mansoni infection on steady-state offspring immunity, as ...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1009260

    authors: Cortés-Selva D,Gibbs L,Ready A,Ekiz HA,O'Connell R,Rajwa B,Fairfax KC

    更新日期:2021-02-01 00:00:00

  • In vivo administration of a JAK3 inhibitor during acute SIV infection leads to significant increases in viral load during chronic infection.

    abstract::The studies reported herein are the first to document the effect of the in vivo administration of a JAK3 inhibitor for defining the potential role of NK cells during acute SIV infection of a group of 15 rhesus macaques (RM). An additional group of 16 MHC/KIR typed RM was included as controls. The previously optimized ...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1003929

    authors: Takahashi Y,Byrareddy SN,Albrecht C,Brameier M,Walter L,Mayne AE,Dunbar P,Russo R,Little DM,Villinger T,Khowawisetsut L,Pattanapanyasat K,Villinger F,Ansari AA

    更新日期:2014-03-06 00:00:00

  • Increased Programmed Death-Ligand 1 is an Early Epithelial Cell Response to Helicobacter pylori Infection.

    abstract::Helicobacter pylori (H. pylori) is the major risk factor for the development of gastric cancer. Our laboratory has reported that the Sonic Hedgehog (Shh) signaling pathway is an early response to infection that is fundamental to the initiation of H. pylori-induced gastritis. H. pylori also induces programmed death lig...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1007468

    authors: Holokai L,Chakrabarti J,Broda T,Chang J,Hawkins JA,Sundaram N,Wroblewski LE,Peek RM Jr,Wang J,Helmrath M,Wells JM,Zavros Y

    更新日期:2019-01-31 00:00:00

  • Correction: Poxviruses: Slipping and sliding through transcription and translation.

    abstract::[This corrects the article DOI: 10.1371/journal.ppat.1006634.]. ...

    journal_title:PLoS pathogens

    pub_type: 杂志文章,已发布勘误

    doi:10.1371/journal.ppat.1006832

    authors: Walsh D

    更新日期:2018-01-04 00:00:00

  • Evolution of structural diversity of trichothecenes, a family of toxins produced by plant pathogenic and entomopathogenic fungi.

    abstract::Trichothecenes are a family of terpenoid toxins produced by multiple genera of fungi, including plant and insect pathogens. Some trichothecenes produced by the fungus Fusarium are among the mycotoxins of greatest concern to food and feed safety because of their toxicity and frequent occurrence in cereal crops, and tri...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1006946

    authors: Proctor RH,McCormick SP,Kim HS,Cardoza RE,Stanley AM,Lindo L,Kelly A,Brown DW,Lee T,Vaughan MM,Alexander NJ,Busman M,Gutiérrez S

    更新日期:2018-04-12 00:00:00

  • Histone methylation changes are required for life cycle progression in the human parasite Schistosoma mansoni.

    abstract::Epigenetic mechanisms and chromatin structure play an important role in development. Their impact is therefore expected to be strong in parasites with complex life cycles and multiple, strikingly different, developmental stages, i.e. developmental plasticity. Some studies have already described how the chromatin struc...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1007066

    authors: Roquis D,Taudt A,Geyer KK,Padalino G,Hoffmann KF,Holroyd N,Berriman M,Aliaga B,Chaparro C,Grunau C,Augusto RC

    更新日期:2018-05-21 00:00:00

  • RNA interference analysis of Legionella in Drosophila cells: exploitation of early secretory apparatus dynamics.

    abstract::Legionella pneumophila translocates multiple bacterial effector proteins into host cells to direct formation of a replication vacuole for the bacterium. The emerging consensus is that formation of this compartment involves recruitment of membrane material that traffics between the endoplasmic reticulum (ER) and Golgi....

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.0020034

    authors: Dorer MS,Kirton D,Bader JS,Isberg RR

    更新日期:2006-04-01 00:00:00

  • Emergence of prions selectively resistant to combination drug therapy.

    abstract::Prions are unorthodox infectious agents that replicate by templating misfolded conformations of a host-encoded glycoprotein, collectively termed PrPSc. Prion diseases are invariably fatal and currently incurable, but oral drugs that can prolong incubation times in prion-infected mice have been developed. Here, we test...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1008581

    authors: Burke CM,Mark KMK,Kun J,Beauchemin KS,Supattapone S

    更新日期:2020-05-18 00:00:00

  • Candida albicans white and opaque cells undergo distinct programs of filamentous growth.

    abstract::The ability to switch between yeast and filamentous forms is central to Candida albicans biology. The yeast-hyphal transition is implicated in adherence, tissue invasion, biofilm formation, phagocyte escape, and pathogenesis. A second form of morphological plasticity in C. albicans involves epigenetic switching betwee...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1003210

    authors: Si H,Hernday AD,Hirakawa MP,Johnson AD,Bennett RJ

    更新日期:2013-03-01 00:00:00

  • Identification of a novel Gammaretrovirus in prostate tumors of patients homozygous for R462Q RNASEL variant.

    abstract::Ribonuclease L (RNase L) is an important effector of the innate antiviral response. Mutations or variants that impair function of RNase L, particularly R462Q, have been proposed as susceptibility factors for prostate cancer. Given the role of this gene in viral defense, we sought to explore the possibility that a vira...

    journal_title:PLoS pathogens

    pub_type: 杂志文章,多中心研究,收录出版

    doi:10.1371/journal.ppat.0020025

    authors: Urisman A,Molinaro RJ,Fischer N,Plummer SJ,Casey G,Klein EA,Malathi K,Magi-Galluzzi C,Tubbs RR,Ganem D,Silverman RH,DeRisi JL

    更新日期:2006-03-01 00:00:00

  • Neutrophil Attack Triggers Extracellular Trap-Dependent Candida Cell Wall Remodeling and Altered Immune Recognition.

    abstract::Pathogens hide immunogenic epitopes from the host to evade immunity, persist and cause infection. The opportunistic human fungal pathogen Candida albicans, which can cause fatal disease in immunocompromised patient populations, offers a good example as it masks the inflammatory epitope β-glucan in its cell wall from h...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1005644

    authors: Hopke A,Nicke N,Hidu EE,Degani G,Popolo L,Wheeler RT

    更新日期:2016-05-25 00:00:00

  • Site-directed M2 proton channel inhibitors enable synergistic combination therapy for rimantadine-resistant pandemic influenza.

    abstract::Pandemic influenza A virus (IAV) remains a significant threat to global health. Preparedness relies primarily upon a single class of neuraminidase (NA) targeted antivirals, against which resistance is steadily growing. The M2 proton channel is an alternative clinically proven antiviral target, yet a near-ubiquitous S3...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1008716

    authors: Scott C,Kankanala J,Foster TL,Goldhill DH,Bao P,Simmons K,Pingen M,Bentham M,Atkins E,Loundras E,Elderfield R,Claridge JK,Thompson J,Stilwell PR,Tathineni R,McKimmie CS,Targett-Adams P,Schnell JR,Cook GP,Evans S,B

    更新日期:2020-08-11 00:00:00

  • A complex extracellular sphingomyelinase of Pseudomonas aeruginosa inhibits angiogenesis by selective cytotoxicity to endothelial cells.

    abstract::The hemolytic phospholipase C (PlcHR) expressed by Pseudomonas aeruginosa is the original member of a Phosphoesterase Superfamily, which includes phosphorylcholine-specific phospholipases C (PC-PLC) produced by frank and opportunistic pathogens. PlcHR, but not all its family members, is also a potent sphingomyelinase ...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1000420

    authors: Vasil ML,Stonehouse MJ,Vasil AI,Wadsworth SJ,Goldfine H,Bolcome RE 3rd,Chan J

    更新日期:2009-05-01 00:00:00

  • RIG-I-like receptor activation drives type I IFN and antiviral signaling to limit Hantaan orthohantavirus replication.

    abstract::Pathogenic hantaviruses, genus Orthohantaviridae, are maintained in rodent reservoirs with zoonotic transmission to humans occurring through inhalation of rodent excreta. Hantavirus disease in humans is characterized by localized vascular leakage and elevated levels of circulating proinflammatory cytokines. Despite th...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1008483

    authors: Kell AM,Hemann EA,Turnbull JB,Gale M Jr

    更新日期:2020-04-24 00:00:00

  • Broadening of neutralization activity to directly block a dominant antibody-driven SARS-coronavirus evolution pathway.

    abstract::Phylogenetic analyses have provided strong evidence that amino acid changes in spike (S) protein of animal and human SARS coronaviruses (SARS-CoVs) during and between two zoonotic transfers (2002/03 and 2003/04) are the result of positive selection. While several studies support that some amino acid changes between an...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1000197

    authors: Sui J,Aird DR,Tamin A,Murakami A,Yan M,Yammanuru A,Jing H,Kan B,Liu X,Zhu Q,Yuan QA,Adams GP,Bellini WJ,Xu J,Anderson LJ,Marasco WA

    更新日期:2008-11-01 00:00:00

  • Therapeutic helminth infection of macaques with idiopathic chronic diarrhea alters the inflammatory signature and mucosal microbiota of the colon.

    abstract::Idiopathic chronic diarrhea (ICD) is a leading cause of morbidity amongst rhesus monkeys kept in captivity. Here, we show that exposure of affected animals to the whipworm Trichuris trichiura led to clinical improvement in fecal consistency, accompanied by weight gain, in four out of the five treated monkeys. By flow ...

    journal_title:PLoS pathogens

    pub_type: 杂志文章

    doi:10.1371/journal.ppat.1003000

    authors: Broadhurst MJ,Ardeshir A,Kanwar B,Mirpuri J,Gundra UM,Leung JM,Wiens KE,Vujkovic-Cvijin I,Kim CC,Yarovinsky F,Lerche NW,McCune JM,Loke P

    更新日期:2012-01-01 00:00:00