C/D box sRNA, CRISPR RNA and tRNA processing in an archaeon with a minimal fragmented genome.

Abstract:

:The analysis of deep sequencing data allows for a genome-wide overview of all the small RNA molecules (the 'sRNome') that are present in a single organism. In the present paper, we review the processing of CRISPR (clustered regularly interspaced short palindromic repeats) RNA, C/D box sRNA (small non-coding RNA) and tRNA in Nanoarchaeum equitans. The minimal and fragmented genome of this tiny archaeon permits a sequencing depth that enables the identification of processing intermediates in the study of RNA processing pathways. These intermediates include circular C/D box sRNA molecules and tRNA half precursors.

journal_name

Biochem Soc Trans

authors

Richter H,Mohr S,Randau L

doi

10.1042/BST20120276

subject

Has Abstract

pub_date

2013-02-01 00:00:00

pages

411-5

issue

1

eissn

0300-5127

issn

1470-8752

pii

BST20120276

journal_volume

41

pub_type

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