Spotlight on the microbes that produce heat shock protein 90-targeting antibiotics.

abstract：:Genomic regions with repeated sequences are unstable and prone to rapid DNA diversification. However, the role of tandem repeats within the coding region is not fully characterized. Here, we have identified a new hypervariable C-type lectin gene family with different numbers of tandem repeats (Rlecs; R means repeat) i...

journal_title：Open biology

authors： Huang Y,Huang X,Zhou X,Wang J,Zhang R,Ma F,Wang K,Zhang Z,Dai X,Cao X,Zhang C,Han K,Ren Q

更新日期：2020-09-01 00:00:00

abstract：:In eukaryotic cells, about one-third of the synthesized proteins are translocated into the endoplasmic reticulum; they are membrane or lumen resident proteins and proteins direct to the Golgi apparatus. The co-translational translocation takes place through the heterotrimeric protein-conducting channel Sec61 which is ...

journal_title：Open biology

authors： Russo A

更新日期：2020-05-01 00:00:00

abstract：:Wnt/β-catenin signalling controls development and adult tissue homeostasis and causes cancer when inappropriately activated. In unstimulated cells, an Axin1-centred multi-protein complex phosphorylates the transcriptional co-activator β-catenin, marking it for degradation. Wnt signalling antagonizes β-catenin proteoly...

journal_title：Open biology

authors： Gerlach JP,Emmink BL,Nojima H,Kranenburg O,Maurice MM

更新日期：2014-11-01 00:00:00

abstract：:In recent years pleiotropy, the phenomenon of one genetic locus influencing several traits, has become a widely researched field in human genetics. With the increasing availability of genome-wide association study summary statistics, as well as the establishment of deeply phenotyped sample collections, it is now possi...

journal_title：Open biology

authors： Hackinger S,Zeggini E

更新日期：2017-11-01 00:00:00

abstract：:With over 9000 species, squamates, which include lizards and snakes, are the largest group of reptiles and second-largest order of vertebrates, spanning a vast array of appendicular skeletal morphology. As such, they provide a promising system for examining developmental and molecular processes underlying limb morphol...

journal_title：Open biology

authors： Melville J,Hunjan S,McLean F,Mantziou G,Boysen K,Parry LJ

更新日期：2016-10-01 00:00:00

abstract：:Osteocytes secrete the glycoprotein sclerostin to inhibit bone formation by osteoblasts, but how sclerostin production is regulated in osteocytes remains unclear. Here, we show that tuberous sclerosis complex 1 (TSC1) in osteocytes promotes sclerostin secretion through inhibition of mechanistic target of rapamycin com...

journal_title：Open biology

authors： Liu W,Wang Z,Yang J,Wang Y,Li K,Huang B,Yan B,Wang T,Li M,Zou Z,Yang J,Xiao G,Cui ZK,Liu A,Bai X

更新日期：2019-05-31 00:00:00

abstract：:How a single genome can give rise to distinct cell types remains a fundamental question in biology. Mammals are able to specify and maintain hundreds of cell fates by selectively activating unique subsets of their genome. This is achieved, in part, by enhancers-genetic elements that can increase transcription of both ...

journal_title：Open biology

authors： Tafessu A,Banaszynski LA

更新日期：2020-10-01 00:00:00

abstract：:Ubiquitination is a versatile post-translational modification that regulates a multitude of cellular processes. Its versatility is based on the ability of ubiquitin to form multiple types of polyubiquitin chains, which are recognized by specific ubiquitin receptors to induce the required cellular response. Linear ubiq...

journal_title：Open biology

authors： Rittinger K,Ikeda F

更新日期：2017-04-01 00:00:00

abstract：:Myzozoans (which include dinoflagellates, chromerids and apicomplexans) display notable divergence from their ciliate sister group, including a reduced mitochondrial genome and divergent metabolic processes. The factors contributing to these divergent processes are still poorly understood and could serve as potential ...

journal_title：Open biology

authors： Klug D,Mair GR,Frischknecht F,Douglas RG

更新日期：2016-04-01 00:00:00

abstract：:The first meeting exclusively dedicated to the 'High-throughput dense reconstruction of cell lineages' took place at Janelia Research Campus (Howard Hughes Medical Institute) from 14 to 18 April 2019. Organized by Tzumin Lee, Connie Cepko, Jorge Garcia-Marques and Isabel Espinosa-Medina, this meeting echoed the recent...

journal_title：Open biology

authors： Espinosa-Medina I,Garcia-Marques J,Cepko C,Lee T

更新日期：2019-12-01 00:00:00

abstract：:'Epichromatin', the surface of chromatin beneath the interphase nuclear envelope (NE) or at the surface of mitotic chromosomes, was discovered by immunostaining with a specific bivalent mouse monoclonal anti-nucleosome antibody (mAb PL2-6). 'Chromomeres', punctate chromatin particles approximately 200-300 nm in diamet...

journal_title：Open biology

authors： Olins DE,Olins AL

更新日期：2018-06-01 00:00:00

abstract：:Following thymic output, αβ⁺CD4⁺ T cells become activated in the periphery when they encounter peptide-major histocompatibility complex. A combination of cytokine and co-stimulatory signals instructs the differentiation of T cells into various lineages and subsequent expansion and contraction during an appropriate and...

journal_title：Open biology

authors： Coomes SM,Pelly VS,Wilson MS

更新日期：2013-01-23 00:00:00

abstract：:T-cell identity is established by the expression of a clonotypic T-cell receptor (TCR), generated by somatic rearrangement of TCRα and β genes. The properties of the TCR determine both the degree of self-reactivity and the repertoire of antigens that can be recognized. For CD8 T cells, the relationship between TCR ide...

journal_title：Open biology

authors： Swee LK,Tan ZW,Sanecka A,Yoshida N,Patel H,Grotenbreg G,Frickel EM,Ploegh HL

更新日期：2016-11-01 00:00:00

abstract：:The conserved Hedgehog (HH) signals control animal development, adult stem cell maintenance and oncogenesis. In Drosophila, the HH co-receptor Patched (PTC) controls both HH gradient formation and signalling. PTC is post-translationally downregulated by HH, which promotes its endocytosis and destabilization, but the m...

journal_title：Open biology

authors： Brigui A,Hofmann L,Argüelles C,Sanial M,Holmgren RA,Plessis A

更新日期：2015-10-01 00:00:00

abstract：:The urine of bank voles (Myodes glareolus) contains substantial quantities of a small protein that is expressed at much higher levels in males than females, and at higher levels in males in the breeding season. This protein was purified and completely sequenced at the protein level by mass spectrometry. Leucine/isoleu...

journal_title：Open biology

authors： Loxley GM,Unsworth J,Turton MJ,Jebb A,Lilley KS,Simpson DM,Rigden DJ,Hurst JL,Beynon RJ

更新日期：2017-09-01 00:00:00

abstract：:Acute nociceptive pain is an undesirable feeling but has a physiological significance as a warning system for living organisms. Conversely, chronic pain is lacking physiological significance, but rather represents a confusion of nerve functions. The neuropathic pain that occurs after peripheral nerve injury (PNI) is p...

journal_title：Open biology

authors： Inoue K

更新日期：2018-11-28 00:00:00

abstract：:Most animals have separate sexes. The differential expression of gene products, in particular that of gene regulators, is underlying sexual dimorphism. Analyses of sex-biased expression have focused mostly on protein-coding genes. Several lines of evidence indicate that microRNAs, a class of major gene regulators, are...

journal_title：Open biology

authors： Marco A

更新日期：2014-04-02 00:00:00

abstract：:Cancer cells undergo many different alterations during their transformation, including genetic and epigenetic events. The controlled division of healthy cells can be impaired through the downregulation of tumour suppressor genes. Here, we provide an update of the mechanisms in which epigenetically altered coding and n...

journal_title：Open biology

authors： Llinàs-Arias P,Esteller M

更新日期：2017-09-01 00:00:00

abstract：:DNA methylation has been investigated for many years, but recent technologies have allowed for single-cell- and single-base-resolution DNA methylation datasets and more accurate assessment of DNA methylation dynamics at the key genomic regions that regulate gene expression in human early embryonic development. In this...

journal_title：Open biology

authors： Luo R,Bai C,Yang L,Zheng Z,Su G,Gao G,Wei Z,Zuo Y,Li G

更新日期：2018-10-31 00:00:00

abstract：:We here address the question of whether there is any correlation between subjective preference for simple configurations within a specific visual domain such as motion and strength of activity in visual areas in which that domain is emphasized. We prepared several distinctive patterns of dots in motion with various ch...

journal_title：Open biology

authors： Zeki S,Stutters J

更新日期：2012-02-01 00:00:00

abstract：:Membrane-associated histidine kinases (HKs) in two-component systems respond to environmental stimuli by autophosphorylation and phospho-transfer. HK typically contains a periplasmic sensor domain that regulates the cytoplasmic kinase domain through a conserved cytoplasmic linker. How signal is transduced from the lig...

journal_title：Open biology

authors： Liu J,Yang J,Wen J,Yang Y,Wei X,Zhang X,Wang YP

更新日期：2014-06-01 00:00:00

abstract：:The range of biological outcomes generated by many signalling proteins in development and homeostasis is increased by their interactions with glycosaminoglycans, particularly heparan sulfate (HS). This interaction controls the localization and movement of these signalling proteins, but whether such control depends on ...

journal_title：Open biology

authors： Sun C,Marcello M,Li Y,Mason D,Lévy R,Fernig DG

更新日期：2016-03-01 00:00:00

abstract：:ThyX is an essential thymidylate synthase that is mechanistically and structurally unrelated to the functionally analogous human enzyme, thus providing means for selective inhibition of bacterial growth. To identify novel compounds with anti-bacterial activity against the human pathogenic bacterium Helicobacter pylori...

journal_title：Open biology

authors： Skouloubris S,Djaout K,Lamarre I,Lambry JC,Anger K,Briffotaux J,Liebl U,de Reuse H,Myllykallio H

更新日期：2015-06-01 00:00:00

abstract：:Understanding gene regulation requires knowledge of changes in transcription factor (TF) activities. Simultaneous direct measurement of numerous TF activities is currently impossible. Nevertheless, statistical approaches to infer TF activities have yielded non-trivial and verifiable predictions for individual TFs. Her...

journal_title：Open biology

authors： Rolfe MD,Ocone A,Stapleton MR,Hall S,Trotter EW,Poole RK,Sanguinetti G,Green J,SysMO-SUMO Consortium.

更新日期：2012-07-01 00:00:00

abstract：:Skeletal vasculature plays a central role in the maintenance of microenvironments for osteogenesis and haematopoiesis. In addition to supplying oxygen and nutrients, vasculature provides a number of inductive factors termed as angiocrine signals. Blood vessels drive recruitment of osteoblast precursors and bone format...

journal_title：Open biology

authors： Sivan U,De Angelis J,Kusumbe AP

更新日期：2019-10-31 00:00:00

abstract：:Indirect flight muscles (IFMs) in adult Drosophila provide the key power stroke for wing beating. They also serve as a valuable model for studying muscle development. An age-dependent decline in Drosophila free flight has been documented, but its relation to gross muscle structure has not yet been explored satisfactor...

journal_title：Open biology

authors： Chaturvedi D,Prabhakar S,Aggarwal A,Atreya KB,VijayRaghavan K

更新日期：2019-06-28 00:00:00

abstract：:Parkinson's disease (PD) is characterized by selective loss of dopaminergic neurons in the pars compacta of the substantia nigra and accumulation of ubiquitinated proteins in aggregates called Lewy bodies. Several mutated genes have been found in familial PD patients, including SNCA (α-synuclein), PARK2 (parkin), PINK...

journal_title：Open biology

authors： Im E,Yoo L,Hyun M,Shin WH,Chung KC

更新日期：2016-08-01 00:00:00

abstract：:Pseudomonas aeruginosa are noscomially acquired, opportunistic pathogens that pose a major threat to the health of burns patients and the immunocompromised. We sequenced the genomes of P. aeruginosa isolates RNS_PA1, RNS_PA46 and RNS_PAE05, which displayed resistance to almost all frontline antibiotics, including gent...

journal_title：Open biology

authors： Roy Chowdhury P,Scott M,Worden P,Huntington P,Hudson B,Karagiannis T,Charles IG,Djordjevic SP

更新日期：2016-03-01 00:00:00

abstract：:The conserved process of centriole duplication requires Plk4 kinase to recruit and promote interactions between Sas6 and Sas5/Ana2/STIL (respective nomenclature of worms/flies/humans). Plk4-mediated phosphorylation of Ana2/STIL in its conserved STAN motif has been shown to promote its interaction with Sas6. However, S...

journal_title：Open biology

authors： Dzhindzhev NS,Tzolovsky G,Lipinszki Z,Abdelaziz M,Debski J,Dadlez M,Glover DM

更新日期：2017-12-01 00:00:00

abstract：:Heterochromatin plays important roles in eukaryotic genome regulation. However, the repressive nature of heterochromatin combined with its propensity to self-propagate necessitates robust mechanisms to contain heterochromatin within defined boundaries and thus prevent silencing of expressed genes. Here we show that lo...

journal_title：Open biology

authors： Verrier L,Taglini F,Barrales RR,Webb S,Urano T,Braun S,Bayne EH

更新日期：2015-05-01 00:00:00