Bringing the physical sciences into your cell biology research.

Abstract:

:Historically, much of biology was studied by physicists and mathematicians. With the advent of modern molecular biology, a wave of researchers became trained in a new scientific discipline filled with the language of genes, mutants, and the central dogma. These new molecular approaches have provided volumes of information on biomolecules and molecular pathways from the cellular to the organismal level. The challenge now is to determine how this seemingly endless list of components works together to promote the healthy function of complex living systems. This effort requires an interdisciplinary approach by investigators from both the biological and the physical sciences.

journal_name

Mol Biol Cell

authors

Robinson DN,Iglesias PA

doi

10.1091/mbc.E12-05-0354

subject

Has Abstract

pub_date

2012-11-01 00:00:00

pages

4167-70

issue

21

eissn

1059-1524

issn

1939-4586

pii

23/21/4167

journal_volume

23

pub_type

杂志文章
  • Early stages of the secretory pathway, but not endosomes, are required for Cvt vesicle and autophagosome assembly in Saccharomyces cerevisiae.

    abstract::The Cvt pathway is a biosynthetic transport route for a distinct subset of resident yeast vacuolar hydrolases, whereas macroautophagy is a nonspecific degradative mechanism that allows cell survival during starvation. Yet, these two vacuolar trafficking pathways share a number of identical molecular components and are...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.e03-07-0479

    authors: Reggiori F,Wang CW,Nair U,Shintani T,Abeliovich H,Klionsky DJ

    更新日期:2004-05-01 00:00:00

  • Diverse cytopathologies in mitochondrial disease are caused by AMP-activated protein kinase signaling.

    abstract::The complex cytopathology of mitochondrial diseases is usually attributed to insufficient ATP. AMP-activated protein kinase (AMPK) is a highly sensitive cellular energy sensor that is stimulated by ATP-depleting stresses. By antisense-inhibiting chaperonin 60 expression, we produced mitochondrially diseased strains wi...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.e06-09-0881

    authors: Bokko PB,Francione L,Bandala-Sanchez E,Ahmed AU,Annesley SJ,Huang X,Khurana T,Kimmel AR,Fisher PR

    更新日期:2007-05-01 00:00:00

  • Long-distance relationships: do membrane nanotubes regulate cell-cell communication and disease progression?

    abstract::Metazoan cells rapidly exchange signals at tight cell-cell interfaces, including synapses and gap junctions. Advances in imaging recently exposed a third mode of intercellular cross-talk mediated by thin, actin-containing membrane extensions broadly known as "membrane" or "tunneling" nanotubes. An explosion of researc...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.E12-08-0622

    authors: Sherer NM

    更新日期:2013-04-01 00:00:00

  • VE-cadherin regulates endothelial actin activating Rac and increasing membrane association of Tiam.

    abstract::Previously published reports support the concept that, besides promoting homotypic intercellular adhesion, cadherins may transfer intracellular signals. However, the signaling pathways triggered by cadherin clustering and their biological significance are still poorly understood. We report herein that transfection of ...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.01-07-0368

    authors: Lampugnani MG,Zanetti A,Breviario F,Balconi G,Orsenigo F,Corada M,Spagnuolo R,Betson M,Braga V,Dejana E

    更新日期:2002-04-01 00:00:00

  • The LC7 light chains of Chlamydomonas flagellar dyneins interact with components required for both motor assembly and regulation.

    abstract::Members of the LC7/Roadblock family of light chains (LCs) have been found in both cytoplasmic and axonemal dyneins. LC7a was originally identified within Chlamydomonas outer arm dynein and associates with this motor's cargo-binding region. We describe here a novel member of this protein family, termed LC7b that is als...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.e04-06-0461

    authors: DiBella LM,Sakato M,Patel-King RS,Pazour GJ,King SM

    更新日期:2004-10-01 00:00:00

  • Nutritional homeostasis in batch and steady-state culture of yeast.

    abstract::We studied the physiological response to limitation by diverse nutrients in batch and steady-state (chemostat) cultures of S. cerevisiae. We found that the global pattern of transcription in steady-state cultures in limiting phosphate or sulfate is essentially identical to that of batch cultures growing in the same me...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.e04-04-0306

    authors: Saldanha AJ,Brauer MJ,Botstein D

    更新日期:2004-09-01 00:00:00

  • CARMIL2 is a novel molecular connection between vimentin and actin essential for cell migration and invadopodia formation.

    abstract::Cancer cell migration requires the regulation of actin networks at protrusions associated with invadopodia and other leading edges. Carcinomas become invasive after undergoing an epithelial-mesenchymal transition characterized by the appearance of vimentin filaments. While vimentin expression correlates with cell migr...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.E15-08-0552

    authors: Lanier MH,Kim T,Cooper JA

    更新日期:2015-12-15 00:00:00

  • Munc13-4 is an effector of rab27a and controls secretion of lysosomes in hematopoietic cells.

    abstract::Griscelli syndrome type 2 (GS2) is a genetic disorder in which patients exhibit life-threatening defects of cytotoxic T lymphocytes (CTLs) whose lytic granules fail to dock on the plasma membrane and therefore do not release their contents. The disease is caused by the absence of functional rab27a, but how rab27a cont...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.e04-10-0923

    authors: Neeft M,Wieffer M,de Jong AS,Negroiu G,Metz CH,van Loon A,Griffith J,Krijgsveld J,Wulffraat N,Koch H,Heck AJ,Brose N,Kleijmeer M,van der Sluijs P

    更新日期:2005-02-01 00:00:00

  • Regulation of endocytosis, nuclear translocation, and signaling of fibroblast growth factor receptor 1 by E-cadherin.

    abstract::Fibroblast growth factor (FGF) receptors (FGFRs) signal to modulate diverse cellular functions, including epithelial cell morphogenesis. In epithelial cells, E-cadherin plays a key role in cell-cell adhesion, and its function can be regulated through endocytic trafficking. In this study, we investigated the location, ...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.e04-09-0845

    authors: Bryant DM,Wylie FG,Stow JL

    更新日期:2005-01-01 00:00:00

  • Isolation of protein glycosylation mutants in the fission yeast Schizosaccharomyces pombe.

    abstract::We have isolated mutants in the fission yeast Schizosaccharomyces pombe that are defective in protein glycosylation. A collection of osmotically sensitive mutants was prepared and screened for glycosylation defects using lectin staining as an assay. Mutants singly defective in four glycoprotein synthesis genes (gps1-4...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.6.5.485

    authors: Huang KM,Snider MD

    更新日期:1995-05-01 00:00:00

  • Phosphorylation of the autoinhibitory domain of the Sso t-SNAREs promotes binding of the Vsm1 SNARE regulator in yeast.

    abstract::We have shown that protein kinase A phosphorylation of t-SNAREs inhibits SNARE assembly and suppresses endo- and exocytosis in yeast. Herein, we show that protein kinase A phosphorylation of the Sso exocytic t-SNAREs promotes the binding of Vsm1, a potential SNARE regulator identified previously in our laboratory. Pho...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.e02-12-0804

    authors: Marash M,Gerst JE

    更新日期:2003-08-01 00:00:00

  • Activation and functional analysis of Janus kinase 2 in BA/F3 cells using the coumermycin/gyrase B system.

    abstract::Janus kinase 2 (Jak2) protein tyrosine kinase plays an important role in interleukin-3- or granulocyte-macrophage colony-stimulating factor-mediated signal transduction pathways leading to cell proliferation, activation of early response genes, and inhibition of apoptosis. However, it is unclear whether Jak2 can activ...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.9.12.3299

    authors: Mohi MG,Arai Ki,Watanabe S

    更新日期:1998-12-01 00:00:00

  • A GFP-based system to uncouple mRNA transport from translation in a single living neuron.

    abstract::An inducible fluorescent system based on GFP is presented that allows for the uncoupling of dendritic mRNA transport from subsequent protein synthesis at the single cell level. The iron-responsive element (IRE) derived from ferritin mRNA in the 5'-UTR of the GFP reporter mRNA renders translation of its mRNA dependent ...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.e02-08-0505

    authors: Macchi P,Hemraj I,Goetze B,Grunewald B,Mallardo M,Kiebler MA

    更新日期:2003-04-01 00:00:00

  • The 14-3-3 protein Bmh1 functions in the spindle position checkpoint by breaking Bfa1 asymmetry at yeast centrosomes.

    abstract::In addition to their well-known role in microtubule organization, centrosomes function as signaling platforms and regulate cell cycle events. An important example of such a function is the spindle position checkpoint (SPOC) of budding yeast. SPOC is a surveillance mechanism that ensures alignment of the mitotic spindl...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.E14-04-0890

    authors: Caydasi AK,Micoogullari Y,Kurtulmus B,Palani S,Pereira G

    更新日期:2014-07-15 00:00:00

  • Gemin3 is an essential gene required for larval motor function and pupation in Drosophila.

    abstract::The assembly of metazoan Sm-class small nuclear ribonucleoproteins (snRNPs) is an elaborate, step-wise process that takes place in multiple subcellular compartments. The initial steps, including formation of the core RNP, are mediated by the survival motor neuron (SMN) protein complex. Loss-of-function mutations in hu...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.e08-01-0024

    authors: Shpargel KB,Praveen K,Rajendra TK,Matera AG

    更新日期:2009-01-01 00:00:00

  • Key events during the transition from rapid growth to quiescence in budding yeast require posttranscriptional regulators.

    abstract::Yeast that naturally exhaust the glucose from their environment differentiate into three distinct cell types distinguishable by flow cytometry. Among these is a quiescent (Q) population, which is so named because of its uniform but readily reversed G1 arrest, its fortified cell walls, heat tolerance, and longevity. Da...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.E13-05-0241

    authors: Li L,Miles S,Melville Z,Prasad A,Bradley G,Breeden LL

    更新日期:2013-12-01 00:00:00

  • Cloning and functional characterization of mammalian homologues of the COPII component Sec23.

    abstract::We screened a human cDNA library with a probe derived from a partial SEC23 mouse homologue and isolated two different cDNA clones (hSec23A and hSec23B) encoding proteins of a predicted molecular mass of 85 kDa. hSec23Ap and hSec23Bp were 85% identical and shared 48% identity with the yeast Sec23p. Affinity-purified an...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.7.10.1535

    authors: Paccaud JP,Reith W,Carpentier JL,Ravazzola M,Amherdt M,Schekman R,Orci L

    更新日期:1996-10-01 00:00:00

  • Transformation by v-Src: Ras-MAPK and PI3K-mTOR mediate parallel pathways.

    abstract::An increase in the level of active, GTP-bound Ras is not necessary for transformation of chicken embryo fibroblasts (CEF) by v-Src. This suggests that other Ras-independent pathways contribute to transformation by v-Src. To address the possibility that activation of phosphatidylinositol-3-kinase (PI3K) and the mammali...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.10.6.1693

    authors: Penuel E,Martin GS

    更新日期:1999-06-01 00:00:00

  • Conserved Ark1-related kinases function in a TORC2 signaling network.

    abstract::In all orders of life, cell cycle progression in proliferating cells is dependent on cell growth, and the extent of growth required for cell cycle progression is proportional to growth rate. Thus, cells growing rapidly in rich nutrients are substantially larger than slow-growing cells. In budding yeast, a conserved si...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.E19-12-0685

    authors: Alcaide-Gavilán M,Lucena R,Banuelos S,Kellogg DR

    更新日期:2020-08-15 00:00:00

  • The RNA-binding protein HuD is required for GAP-43 mRNA stability, GAP-43 gene expression, and PKC-dependent neurite outgrowth in PC12 cells.

    abstract::The RNA-binding protein HuD binds to a regulatory element in the 3' untranslated region (3' UTR) of the GAP-43 mRNA. To investigate the functional significance of this interaction, we generated PC12 cell lines in which HuD levels were controlled by transfection with either antisense (pDuH) or sense (pcHuD) constructs....

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.11.9.3191

    authors: Mobarak CD,Anderson KD,Morin M,Beckel-Mitchener A,Rogers SL,Furneaux H,King P,Perrone-Bizzozero NI

    更新日期:2000-09-01 00:00:00

  • Rsp5 and Mdm30 reshape the mitochondrial network in response to age-induced vacuole stress.

    abstract::Mitochondrial decline is a hallmark of aging, and cells are equipped with many systems to regulate mitochondrial structure and function in response to stress and metabolic alterations. Here, using budding yeast, we identify a proteolytic pathway that contributes to alterations in mitochondrial structure in aged cells ...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.E19-02-0094

    authors: Goodrum JM,Lever AR,Coody TK,Gottschling DE,Hughes AL

    更新日期:2019-08-01 00:00:00

  • VX-809 corrects folding defects in cystic fibrosis transmembrane conductance regulator protein through action on membrane-spanning domain 1.

    abstract::Cystic fibrosis (CF) is a fatal genetic disorder associated with defective hydration of lung airways due to the loss of chloride transport through the CF transmembrane conductance regulator protein (CFTR). CFTR contains two membrane-spanning domains (MSDs), two nucleotide-binding domains (NBDs), and a regulatory domai...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.E13-05-0240

    authors: Ren HY,Grove DE,De La Rosa O,Houck SA,Sopha P,Van Goor F,Hoffman BJ,Cyr DM

    更新日期:2013-10-01 00:00:00

  • Characterizing the roles of Met31 and Met32 in coordinating Met4-activated transcription in the absence of Met30.

    abstract::Yeast sulfur metabolism is transcriptionally regulated by the activator Met4. Met4 lacks DNA-binding ability and relies on interactions with Met31 and Met32, paralogous proteins that bind the same cis-regulatory element, to activate its targets. Although Met31 and Met32 are redundant for growth in the absence of methi...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.E11-06-0532

    authors: Carrillo E,Ben-Ari G,Wildenhain J,Tyers M,Grammentz D,Lee TA

    更新日期:2012-05-01 00:00:00

  • Reorganization of budding yeast cytoplasm upon energy depletion.

    abstract::Yeast cells, when exposed to stress, can enter a protective state in which cell division, growth, and metabolism are down-regulated. They remain viable in this state until nutrients become available again. How cells enter this protective survival state and what happens at a cellular and subcellular level are largely u...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.E20-02-0125

    authors: Marini G,Nüske E,Leng W,Alberti S,Pigino G

    更新日期:2020-06-01 00:00:00

  • Two functionally identical modular enhancers in Drosophila troponin T gene establish the correct protein levels in different muscle types.

    abstract::The control of muscle-specific expression is one of the principal mechanisms by which diversity is generated among muscle types. In an attempt to elucidate the regulatory mechanisms that control fiber diversity in any given muscle, we have focused our attention on the transcriptional regulation of the Drosophila Tropo...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.e03-10-0729

    authors: Mas JA,García-Zaragoza E,Cervera M

    更新日期:2004-04-01 00:00:00

  • Genetic interactions between the DBL-1/BMP-like pathway and dpy body size-associated genes in Caenorhabditis elegans.

    abstract::Bone morphogenetic protein (BMP) signaling pathways control many developmental and homeostatic processes, including cell size and extracellular matrix remodeling. An understanding of how this pathway itself is controlled remains incomplete. To identify novel regulators of BMP signaling, we performed a forward genetic ...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.E19-09-0500

    authors: Lakdawala MF,Madhu B,Faure L,Vora M,Padgett RW,Gumienny TL

    更新日期:2019-12-15 00:00:00

  • Histone deacetylase inhibitors trigger a G2 checkpoint in normal cells that is defective in tumor cells.

    abstract::Important aspects of cell cycle regulation are the checkpoints, which respond to a variety of cellular stresses to inhibit cell cycle progression and act as protective mechanisms to ensure genomic integrity. An increasing number of tumor suppressors are being demonstrated to have roles in checkpoint mechanisms, implyi...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.11.6.2069

    authors: Qiu L,Burgess A,Fairlie DP,Leonard H,Parsons PG,Gabrielli BG

    更新日期:2000-06-01 00:00:00

  • Structural organization of nuclear lamins A, C, B1, and B2 revealed by superresolution microscopy.

    abstract::The nuclear lamina is a key structural element of the metazoan nucleus. However, the structural organization of the major proteins composing the lamina is poorly defined. Using three-dimensional structured illumination microscopy and computational image analysis, we characterized the supramolecular structures of lamin...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.E15-07-0461

    authors: Shimi T,Kittisopikul M,Tran J,Goldman AE,Adam SA,Zheng Y,Jaqaman K,Goldman RD

    更新日期:2015-11-05 00:00:00

  • Natural chromatin is heterogeneous and self-associates in vitro.

    abstract::The 30-nm fiber is commonly formed by oligonucleosome arrays in vitro but rarely found inside cells. To determine how chromatin higher-order structure is controlled, we used electron cryotomography (cryo-ET) to study the undigested natural chromatin released from two single-celled organisms in which 30-nm fibers have ...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.E17-07-0449

    authors: Cai S,Song Y,Chen C,Shi J,Gan L

    更新日期:2018-07-01 00:00:00

  • A regulated adaptor function of p40phox: distinct p67phox membrane targeting by p40phox and by p47phox.

    abstract::In the phagocytic cell, NADPH oxidase (Nox2) system, cytoplasmic regulators (p47(phox), p67(phox), p40(phox), and Rac) translocate and associate with the membrane-spanning flavocytochrome b(558), leading to activation of superoxide production. We examined membrane targeting of phox proteins and explored conformational...

    journal_title:Molecular biology of the cell

    pub_type: 杂志文章

    doi:10.1091/mbc.e06-08-0731

    authors: Ueyama T,Tatsuno T,Kawasaki T,Tsujibe S,Shirai Y,Sumimoto H,Leto TL,Saito N

    更新日期:2007-02-01 00:00:00