DAGLβ inhibition perturbs a lipid network involved in macrophage inflammatory responses.

Abstract:

:The endocannabinoid 2-arachidonoylglycerol (2-AG) is biosynthesized by diacylglycerol lipases DAGLα and DAGLβ. Chemical probes to perturb DAGLs are needed to characterize endocannabinoid function in biological processes. Here we report a series of 1,2,3-triazole urea inhibitors, along with paired negative-control and activity-based probes, for the functional analysis of DAGLβ in living systems. Optimized inhibitors showed high selectivity for DAGLβ over other serine hydrolases, including DAGLα (∼60-fold selectivity), and the limited off-targets, such as ABHD6, were also inhibited by the negative-control probe. Using these agents and Daglb(-/-) mice, we show that DAGLβ inactivation lowers 2-AG, as well as arachidonic acid and eicosanoids, in mouse peritoneal macrophages in a manner that is distinct and complementary to disruption of cytosolic phospholipase-A2. We observed a corresponding reduction in lipopolysaccharide-induced tumor necrosis factor-α release. These findings indicate that DAGLβ is a key metabolic hub within a lipid network that regulates proinflammatory responses in macrophages.

journal_name

Nat Chem Biol

journal_title

Nature chemical biology

authors

Hsu KL,Tsuboi K,Adibekian A,Pugh H,Masuda K,Cravatt BF

doi

10.1038/nchembio.1105

subject

Has Abstract

pub_date

2012-12-01 00:00:00

pages

999-1007

issue

12

eissn

1552-4450

issn

1552-4469

pii

nchembio.1105

journal_volume

8

pub_type

杂志文章
  • Whole-organism screening for gluconeogenesis identifies activators of fasting metabolism.

    abstract::Improving the control of energy homeostasis can lower cardiovascular risk in metabolically compromised individuals. To identify new regulators of whole-body energy control, we conducted a high-throughput screen in transgenic reporter zebrafish for small molecules that modulate the expression of the fasting-inducible g...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.1136

    authors: Gut P,Baeza-Raja B,Andersson O,Hasenkamp L,Hsiao J,Hesselson D,Akassoglou K,Verdin E,Hirschey MD,Stainier DY

    更新日期:2013-02-01 00:00:00

  • Engineering protein stability with atomic precision in a monomeric miniprotein.

    abstract::Miniproteins simplify the protein-folding problem, allowing the dissection of forces that stabilize protein structures. Here we describe PPα-Tyr, a designed peptide comprising an α-helix buttressed by a polyproline II helix. PPα-Tyr is water soluble and monomeric, and it unfolds cooperatively with a midpoint unfolding...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.2380

    authors: Baker EG,Williams C,Hudson KL,Bartlett GJ,Heal JW,Porter Goff KL,Sessions RB,Crump MP,Woolfson DN

    更新日期:2017-07-01 00:00:00

  • Lipid droplets can promote drug accumulation and activation.

    abstract::Genetic screens in cultured human cells represent a powerful unbiased strategy to identify cellular pathways that determine drug efficacy, providing critical information for clinical development. We used insertional mutagenesis-based screens in haploid cells to identify genes required for the sensitivity to lasonolide...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/s41589-019-0447-7

    authors: Dubey R,Stivala CE,Nguyen HQ,Goo YH,Paul A,Carette JE,Trost BM,Rohatgi R

    更新日期:2020-02-01 00:00:00

  • Genome-wide chemical mapping of O-GlcNAcylated proteins in Drosophila melanogaster.

    abstract::N-Acetylglucosamine β-O-linked to nucleocytoplasmic proteins (O-GlcNAc) is implicated in the regulation of gene expression in organisms, from humans to Drosophila melanogaster. Within Drosophila, O-GlcNAc transferase (OGT) is one of the Polycomb group proteins (PcGs) that act through Polycomb group response elements (...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.2247

    authors: Liu TW,Myschyshyn M,Sinclair DA,Cecioni S,Beja K,Honda BM,Morin RD,Vocadlo DJ

    更新日期:2017-02-01 00:00:00

  • Brain endogenous liver X receptor ligands selectively promote midbrain neurogenesis.

    abstract::Liver X receptors (Lxrα and Lxrβ) are ligand-dependent nuclear receptors critical for ventral midbrain neurogenesis in vivo. However, no endogenous midbrain Lxr ligand has so far been identified. Here we used LC/MS and functional assays to identify cholic acid as a new Lxr ligand. Moreover, 24(S),25-epoxycholesterol (...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.1156

    authors: Theofilopoulos S,Wang Y,Kitambi SS,Sacchetti P,Sousa KM,Bodin K,Kirk J,Saltó C,Gustafsson M,Toledo EM,Karu K,Gustafsson JÅ,Steffensen KR,Ernfors P,Sjövall J,Griffiths WJ,Arenas E

    更新日期:2013-02-01 00:00:00

  • Working towards an exegesis for lipids in biology.

    abstract::As a field, lipidomics is in its infancy, yet it has already begun to influence lipid biochemistry in myriad ways. As with other omic technologies, the field is driven by advances in analytical chemistry, particularly by mass spectrometry. At the heart of a renaissance in lipid biochemistry, systems biology is being u...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio0909-602

    authors: Brown HA,Murphy RC

    更新日期:2009-09-01 00:00:00

  • A new metal binding domain involved in cadmium, cobalt and zinc transport.

    abstract::The P1B-ATPases, which couple cation transport across membranes to ATP hydrolysis, are central to metal homeostasis in all organisms. An important feature of P1B-ATPases is the presence of soluble metal binding domains (MBDs) that regulate transport activity. Only one type of MBD has been characterized extensively, bu...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.1863

    authors: Smith AT,Barupala D,Stemmler TL,Rosenzweig AC

    更新日期:2015-09-01 00:00:00

  • A reactivity-based probe of the intracellular labile ferrous iron pool.

    abstract::Improved methods for studying intracellular reactive Fe(II) are of significant interest for studies of iron metabolism and disease-relevant changes in iron homeostasis. Here we describe a highly selective reactivity-based probe in which a Fenton-type reaction with intracellular labile Fe(II) leads to unmasking of the ...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.2116

    authors: Spangler B,Morgan CW,Fontaine SD,Vander Wal MN,Chang CJ,Wells JA,Renslo AR

    更新日期:2016-09-01 00:00:00

  • Primary amines protect against retinal degeneration in mouse models of retinopathies.

    abstract::Vertebrate vision is initiated by photoisomerization of the visual pigment chromophore 11-cis-retinal and is maintained by continuous regeneration of this retinoid through a series of reactions termed the retinoid cycle. However, toxic side reaction products, especially those involving reactive aldehyde groups of the ...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.759

    authors: Maeda A,Golczak M,Chen Y,Okano K,Kohno H,Shiose S,Ishikawa K,Harte W,Palczewska G,Maeda T,Palczewski K

    更新日期:2011-12-25 00:00:00

  • Chemical proteomics reveals ADP-ribosylation of small GTPases during oxidative stress.

    abstract::ADP-ribosylation is a post-translational modification that is known to be involved in cellular homeostasis and stress but has been challenging to analyze biochemically. To facilitate the detection of ADP-ribosylated proteins, we show that an alkyne-adenosine analog, N6-propargyl adenosine (N6pA), is metabolically inco...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.2280

    authors: Westcott NP,Fernandez JP,Molina H,Hang HC

    更新日期:2017-03-01 00:00:00

  • An orthogonal ribosome-tRNA pair via engineering of the peptidyl transferase center.

    abstract::The Watson-Crick base pairs between the 3'-terminal end of tRNAs and ribosomal RNA in the peptidyl transferase center are universally conserved. Here, we report that the introduction of compensatory mutations to Escherichia coli RNAs in this site leads to an orthogonal system independent of the wild-type counterpart, ...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.1549

    authors: Terasaka N,Hayashi G,Katoh T,Suga H

    更新日期:2014-07-01 00:00:00

  • Bioretrosynthetic construction of a didanosine biosynthetic pathway.

    abstract::Concatenation of engineered biocatalysts into multistep pathways markedly increases their utility, but the development of generalizable assembly methods remains a major challenge. Herein we evaluate 'bioretrosynthesis', which is an application of the retrograde evolution hypothesis, for biosynthetic pathway constructi...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.1494

    authors: Birmingham WR,Starbird CA,Panosian TD,Nannemann DP,Iverson TM,Bachmann BO

    更新日期:2014-05-01 00:00:00

  • Orthogonal lipid sensors identify transbilayer asymmetry of plasma membrane cholesterol.

    abstract::Controlled distribution of lipids across various cell membranes is crucial for cell homeostasis and regulation. We developed an imaging method that allows simultaneous in situ quantification of cholesterol in two leaflets of the plasma membrane (PM) using tunable orthogonal cholesterol sensors. Our imaging revealed ma...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.2268

    authors: Liu SL,Sheng R,Jung JH,Wang L,Stec E,O'Connor MJ,Song S,Bikkavilli RK,Winn RA,Lee D,Baek K,Ueda K,Levitan I,Kim KP,Cho W

    更新日期:2017-03-01 00:00:00

  • Interactive exploration of chemical space with Scaffold Hunter.

    abstract::We describe Scaffold Hunter, a highly interactive computer-based tool for navigation in chemical space that fosters intuitive recognition of complex structural relationships associated with bioactivity. The program reads compound structures and bioactivity data, generates compound scaffolds, correlates them in a hiera...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.187

    authors: Wetzel S,Klein K,Renner S,Rauh D,Oprea TI,Mutzel P,Waldmann H

    更新日期:2009-08-01 00:00:00

  • An intrinsically disordered entropic switch determines allostery in Phd-Doc regulation.

    abstract::Conditional cooperativity is a common mechanism involved in transcriptional regulation of prokaryotic type II toxin-antitoxin operons and is intricately related to bacterial persistence. It allows the toxin component of a toxin-antitoxin module to act as a co-repressor at low doses of toxin as compared to antitoxin. W...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.2078

    authors: Garcia-Pino A,De Gieter S,Talavera A,De Greve H,Efremov RG,Loris R

    更新日期:2016-07-01 00:00:00

  • The radical SAM enzyme AlbA catalyzes thioether bond formation in subtilosin A.

    abstract::Subtilosin A is a 35-residue, ribosomally synthesized bacteriocin encoded by the sbo-alb operon of Bacillus subtilis. It is composed of a head-to-tail circular peptide backbone that is additionally restrained by three unusual thioether bonds between three cysteines and the α-carbon of one threonine and two phenylalani...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.798

    authors: Flühe L,Knappe TA,Gattner MJ,Schäfer A,Burghaus O,Linne U,Marahiel MA

    更新日期:2012-02-26 00:00:00

  • Fluorescent castasterone reveals BRI1 signaling from the plasma membrane.

    abstract::Receptor-mediated endocytosis is an integral part of signal transduction as it mediates signal attenuation and provides spatial and temporal dimensions to signaling events. One of the best-studied leucine-rich repeat receptor-like kinases in plants, BRASSINOSTEROID INSENSITIVE 1 (BRI1), perceives its ligand, the brass...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.958

    authors: Irani NG,Di Rubbo S,Mylle E,Van den Begin J,Schneider-Pizoń J,Hniliková J,Šíša M,Buyst D,Vilarrasa-Blasi J,Szatmári AM,Van Damme D,Mishev K,Codreanu MC,Kohout L,Strnad M,Caño-Delgado AI,Friml J,Madder A,Russinova E

    更新日期:2012-05-06 00:00:00

  • Functional mining of transporters using synthetic selections.

    abstract::Only 25% of bacterial membrane transporters have functional annotation owing to the difficulty of experimental study and of accurate prediction of their function. Here we report a sequence-independent method for high-throughput mining of novel transporters. The method is based on ligand-responsive biosensor systems th...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.2189

    authors: Genee HJ,Bali AP,Petersen SD,Siedler S,Bonde MT,Gronenberg LS,Kristensen M,Harrison SJ,Sommer MO

    更新日期:2016-12-01 00:00:00

  • Chemical phylogenetics of histone deacetylases.

    abstract::The broad study of histone deacetylases in chemistry, biology and medicine relies on tool compounds to derive mechanistic insights. A phylogenetic analysis of class I and II histone deacetylases (HDACs) as targets of a comprehensive, structurally diverse panel of inhibitors revealed unexpected isoform selectivity even...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.313

    authors: Bradner JE,West N,Grachan ML,Greenberg EF,Haggarty SJ,Warnow T,Mazitschek R

    更新日期:2010-03-01 00:00:00

  • Programmable and printable Bacillus subtilis biofilms as engineered living materials.

    abstract::Bacterial biofilms can be programmed to produce living materials with self-healing and evolvable functionalities. However, the wider use of artificial biofilms has been hindered by limitations on processability and functional protein secretion capacity. We describe a highly flexible and tunable living functional mater...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/s41589-018-0169-2

    authors: Huang J,Liu S,Zhang C,Wang X,Pu J,Ba F,Xue S,Ye H,Zhao T,Li K,Wang Y,Zhang J,Wang L,Fan C,Lu TK,Zhong C

    更新日期:2019-01-01 00:00:00

  • Open access chemical and clinical probes to support drug discovery.

    abstract::Drug discovery resources in academia and industry are not used efficiently, to the detriment of industry and society. Duplication could be reduced, and productivity could be increased, by performing basic biology and clinical proofs of concept within open access industry-academia partnerships. Chemical biologists coul...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio0709-436

    authors: Edwards AM,Bountra C,Kerr DJ,Willson TM

    更新日期:2009-07-01 00:00:00

  • A conserved water-mediated hydrogen bond network defines bosutinib's kinase selectivity.

    abstract::Kinase inhibitors are important cancer drugs, but they tend to display limited target specificity, and their target profiles are often challenging to rationalize in terms of molecular mechanism. Here we report that the clinical kinase inhibitor bosutinib recognizes its kinase targets by engaging a pair of conserved st...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.1404

    authors: Levinson NM,Boxer SG

    更新日期:2014-02-01 00:00:00

  • Scaffold composition and biological relevance of screening libraries.

    abstract::The chemical scaffolds from which screening libraries are built have strong influence on the libraries' utility for screening campaigns. Here we present analysis of the scaffold composition of several types of commercially available screening collections and compare those compositions to those of drugs and drug candid...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio0807-442

    authors: Shelat AA,Guy RK

    更新日期:2007-08-01 00:00:00

  • Dynamic polymorphism of single actin molecules in the actin filament.

    abstract::Actin filament dynamics are critical in cell motility. The structure of actin filament changes spontaneously and can also be regulated by actin-binding proteins, allowing actin to readily function in response to external stimuli. The interaction with the motor protein myosin changes the dynamic nature of actin filamen...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio763

    authors: Kozuka J,Yokota H,Arai Y,Ishii Y,Yanagida T

    更新日期:2006-02-01 00:00:00

  • Molecular basis for ubiquitin ligase CRL2FEM1C-mediated recognition of C-degron.

    abstract::Proteome integrity depends on the ubiquitin-proteasome system to degrade unwanted or abnormal proteins. In addition to the N-degrons, C-terminal residues of proteins can also serve as degradation signals (C-degrons) that are recognized by specific cullin-RING ubiquitin ligases (CRLs) for proteasomal degradation. FEM1C...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/s41589-020-00703-4

    authors: Yan X,Wang X,Li Y,Zhou M,Li Y,Song L,Mi W,Min J,Dong C

    更新日期:2021-01-04 00:00:00

  • Allosteric inhibition of kinesin-5 modulates its processive directional motility.

    abstract::Small-molecule inhibitors of kinesin-5 (refs. 1-3), a protein essential for eukaryotic cell division, represent alternatives to antimitotic agents that target tubulin. While tubulin is needed for multiple intracellular processes, the known functions of kinesin-5 are limited to dividing cells, making it likely that kin...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio812

    authors: Kwok BH,Kapitein LC,Kim JH,Peterman EJ,Schmidt CF,Kapoor TM

    更新日期:2006-09-01 00:00:00

  • Hijacking a biosynthetic pathway yields a glycosyltransferase inhibitor within cells.

    abstract::Glycosyltransferases are ubiquitous enzymes that catalyze the assembly of glycoconjugates throughout all kingdoms of nature. A long-standing problem is the rational design of probes that can be used to manipulate glycosyltransferase activity in cells and tissues. Here we describe the rational design and synthesis of a...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.520

    authors: Gloster TM,Zandberg WF,Heinonen JE,Shen DL,Deng L,Vocadlo DJ

    更新日期:2011-03-01 00:00:00

  • Light-based control of metabolic flux through assembly of synthetic organelles.

    abstract::To maximize a desired product, metabolic engineers typically express enzymes to high, constant levels. Yet, permanent pathway activation can have undesirable consequences including competition with essential pathways and accumulation of toxic intermediates. Faced with similar challenges, natural metabolic systems comp...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/s41589-019-0284-8

    authors: Zhao EM,Suek N,Wilson MZ,Dine E,Pannucci NL,Gitai Z,Avalos JL,Toettcher JE

    更新日期:2019-06-01 00:00:00

  • Targeting BAX to drug death directly.

    abstract::BCL-2 family protein interactions regulate apoptosis, a critical process that maintains tissue homeostasis but can cause a host of human diseases when deregulated. Venetoclax is the first FDA-approved drug to reactivate apoptosis in cancer by selectively targeting an anti-apoptotic BCL-2 family member. The drug's acti...

    journal_title:Nature chemical biology

    pub_type: 杂志文章,评审

    doi:10.1038/s41589-019-0306-6

    authors: Walensky LD

    更新日期:2019-07-01 00:00:00

  • A mammalian functional nitrate reductase that regulates nitrite and nitric oxide homeostasis.

    abstract::Inorganic nitrite (NO(2)(-)) is emerging as a regulator of physiological functions and tissue responses to ischemia, whereas the more stable nitrate anion (NO(3)(-)) is generally considered to be biologically inert. Bacteria express nitrate reductases that produce nitrite, but mammals lack these specific enzymes. Here...

    journal_title:Nature chemical biology

    pub_type: 杂志文章

    doi:10.1038/nchembio.92

    authors: Jansson EA,Huang L,Malkey R,Govoni M,Nihlén C,Olsson A,Stensdotter M,Petersson J,Holm L,Weitzberg E,Lundberg JO

    更新日期:2008-07-01 00:00:00