Congratulations, you have been carefully chosen to represent an important developmental regulator!

Abstract:

BACKGROUND:Studying a process in a new species often relies on focusing our attention to a candidate gene, encoding a protein similar to one with a known function. Not all the choices seem to be prudent. SCOPE:This Viewpoint includes an overview of issues that are encountered during research of candidate genes. Defining a match for a gene of interest, deciding whether variation in ESTs or RNAseq data for a certain transcript, represent more than one gene. The problem of incorrect annotation of genes due to incorrect in-silico splicing, is also mentioned. The author's humble opinion on how to deal with these issues is provided. CONCLUSIONS:The vast amount of new sequence data provides us with great possibilities for giant leaps in our understanding. Still, we cannot afford to skip over the tedious steps required to confirm that we are indeed studying the correct gene, and try to be sure that the complex expression pattern we observe is not a composite of several genes.

journal_name

Ann Bot

journal_title

Annals of botany

authors

Samach A

doi

10.1093/aob/mcs161

subject

Has Abstract

pub_date

2013-03-01 00:00:00

pages

329-33

issue

3

eissn

0305-7364

issn

1095-8290

pii

mcs161

journal_volume

111

pub_type

杂志文章
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    abstract:BACKGROUND AND AIMS:Grapevine (Vitis spp.) cold hardiness varies dynamically throughout the dormant season, primarily in response to changes in temperature. The development and possible uses of a discrete-dynamic model of bud cold hardiness for three Vitis genotypes are described. METHODS:Iterative methods were used t...

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    doi:10.1093/aob/mcq263

    authors: Ferguson JC,Tarara JM,Mills LJ,Grove GG,Keller M

    更新日期:2011-03-01 00:00:00

  • Quantification of light interception within image-based 3-D reconstruction of sole and intercropped canopies over the entire growth season.

    abstract:BACKGROUND AND AIMS:Light interception is closely related to canopy architecture. Few studies based on multi-view photography have been conducted in a field environment, particularly studies that link 3-D plant architecture with a radiation model to quantify the dynamic canopy light interception. In this study, we comb...

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    authors: Zhu B,Liu F,Xie Z,Guo Y,Li B,Ma Y

    更新日期:2020-09-14 00:00:00

  • Plant salt tolerance: adaptations in halophytes.

    abstract:BACKGROUND:Most of the water on Earth is seawater, each kilogram of which contains about 35 g of salts, and yet most plants cannot grow in this solution; less than 0·2% of species can develop and reproduce with repeated exposure to seawater. These 'extremophiles' are called halophytes. SCOPE:Improved knowledge of halo...

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    authors: Flowers TJ,Colmer TD

    更新日期:2015-02-01 00:00:00

  • Assessment of the validity of the sections in Musa (musaceae) using AFLP.

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    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcf170

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    更新日期:2002-08-01 00:00:00

  • Differences in flooding tolerance between species from two wetland habitats with contrasting hydrology: implications for vegetation development in future floodwater retention areas.

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    更新日期:2009-01-01 00:00:00

  • Reconstruction of the spatio-temporal diversification and ecological niche evolution of Helianthemum (Cistaceae) in the Canary Islands using Genotyping-by-Sequencing data.

    abstract:BACKGROUND AND AIMS:Several biogeographic models have been proposed to explain the colonization and diversification patterns of Macaronesian lineages. In this study, we calculated the diversification rates and explored what model better explains the current distribution of the 15 endemic species to the Canary Islands b...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcaa090

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    更新日期:2020-05-09 00:00:00

  • Novel thigmomorphogenetic responses in Carica papaya: touch decreases anthocyanin levels and stimulates petiole cork outgrowths.

    abstract:BACKGROUND AND AIMS:Because of its rapid growth rate, relative ease of transformation, sequenced genome and low gene number relative to Arabidopsis, the tropical fruit tree, Carica papaya, can serve as a complementary genetic model for complex traits. Here, new phenotypes and touch-regulated gene homologues have been i...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcp009

    authors: Porter BW,Zhu YJ,Webb DT,Christopher DA

    更新日期:2009-04-01 00:00:00

  • Kinship between parents reduces offspring fitness in a natural population of Rhododendron brachycarpum.

    abstract:BACKGROUND AND AIMS:A reduction in offspring fitness resulting from mating between neighbours is interpreted as biparental inbreeding depression. However, little is known about the relationship between the parents' genetic relatedness and biparental inbreeding depression in their progeny in natural populations. This st...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcq018

    authors: Hirao AS

    更新日期:2010-04-01 00:00:00

  • A morphological and quantitative characterization of early floral development in apple (Malus x domestica Borkh.).

    abstract::Apple is an important crop and a focus of research worldwide. However, some aspects of floral commitment and morphogenesis remain unclear. A detailed characterization of bourse shoot apex development was undertaken to provide a framework for future genetic, molecular and physiological studies. Eight morphologically di...

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    authors: Foster T,Johnston R,Seleznyova A

    更新日期:2003-08-01 00:00:00

  • Does polyploidy facilitate long-distance dispersal?

    abstract:BACKGROUND AND AIMS:The ability of plant lineages to reach all continents contributes substantially to their evolutionary success. This is exemplified by the Poaceae, one of the most successful angiosperm families, in which most higher taxa (tribes, subfamilies) have global distributions. Due to the old age of the ocea...

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    pub_type: 杂志文章

    doi:10.1093/aob/mcu047

    authors: Linder HP,Barker NP

    更新日期:2014-06-01 00:00:00

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    abstract:Background and Aims:Predicting both plant water status and leaf gas exchange under various environmental conditions is essential for anticipating the effects of climate change on plant growth and productivity. This study developed a functional-structural grapevine model which combines a mechanistic understanding of sto...

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    authors: Zhu J,Dai Z,Vivin P,Gambetta GA,Henke M,Peccoux A,Ollat N,Delrot S

    更新日期:2018-04-18 00:00:00

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    abstract:BACKGROUND AND AIMS:Bristol rock cress is among the few plant species in the British Isles considered to have a Mediterranean-montane element. Spatiotemporal patterns of colonization of the British Isles since the last interglacial and after the Last Glacial Maximum (LGM) from mainland Europe are underexplored and have...

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    abstract:BACKGROUND AND AIMS:Bromeliaceae is a species-rich neotropical plant family that uses a variety of pollinators, principally vertebrates. Tillandsia is the most diverse genus, and includes more than one-third of all bromeliad species. Within this genus, the majority of species rely on diurnal pollination by hummingbirds...

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    doi:10.1093/aob/mcu031

    authors: Aguilar-Rodríguez PA,MacSwiney G MC,Krömer T,García-Franco JG,Knauer A,Kessler M

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    abstract:BACKGROUND AND AIMS:Although plant distribution patterns are well documented, our understanding of the ecophysiological mechanisms that control the geographical ranges of plant species remains poor. We used a largely ignored method, the performance of the male gametophyte in vitro, to assess whether the thermal range o...

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    doi:10.1093/aob/mcw041

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  • Moderate increase of mean daily temperature adversely affects fruit set of Lycopersicon esculentum by disrupting specific physiological processes in male reproductive development.

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    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcl037

    authors: Sato S,Kamiyama M,Iwata T,Makita N,Furukawa H,Ikeda H

    更新日期:2006-05-01 00:00:00

  • Some properties of the walls of metaxylem vessels of maize roots, including tests of the wettability of their lumenal wall surfaces.

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    journal_title:Annals of botany

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    doi:10.1093/aob/mcu020

    authors: McCully M,Canny M,Baker A,Miller C

    更新日期:2014-05-01 00:00:00

  • Longevity of white clover (Trifolium repens) leaves, stolons and roots, and consequences for nitrogen dynamics under northern temperate climatic conditions.

    abstract:BACKGROUND AND AIMS:White clover (Trifolium repens) is, due to nitrogen (N) fixation, important to the N dynamics of several northern temperate agroecosystems. This study aimed at monitoring growth and death of major white clover plant organs to assess their potential contribution to within-season N input and risk of o...

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    doi:10.1093/aob/mcm078

    authors: Sturite I,Henriksen TM,Breland TA

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  • Effects of floral display size on male and female reproductive success in Mimulus ringens.

    abstract:BACKGROUND AND AIMS:The number of flowers blooming simultaneously on a plant may have profound consequences for reproductive success. Large floral displays often attract more pollinator visits, increasing outcross pollen receipt. However, pollinators frequently probe more flowers in sequence on large displays, potentia...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcr193

    authors: Karron JD,Mitchell RJ

    更新日期:2012-02-01 00:00:00

  • Functional heterostyly in Tylosema esculentum (Caesalpinioideae).

    abstract::Tylosema esculentum is a long-lived perennial species endemic to arid areas of southern Africa. Its potential as a crop species has long been recognized as a result of the high oil and protein content of its seeds. The reproductive biology and breeding systems of the species were investigated in wild and experimental ...

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    pub_type: 杂志文章

    doi:10.1093/aob/mcf006

    authors: Hartley ML,Tshamekeng E,Thomas SM

    更新日期:2002-01-01 00:00:00

  • Sensitivity of the invasive geophyte Oxalis pes-caprae to nutrient availability and competition.

    abstract:BACKGROUND AND AIMS:Invasion by alien plants may be partially related to disturbance-related increases in nutrient availability and decreases of competition with native species, and to superior competitive ability of the invader. Oxalis pes-caprae is an invasive winter geophyte in the Mediterranean Islands that reprodu...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcl289

    authors: Sala A,Verdaguer D,Vilà M

    更新日期:2007-04-01 00:00:00

  • Mesophyll distribution of 'antioxidant' flavonoid glycosides in Ligustrum vulgare leaves under contrasting sunlight irradiance.

    abstract:BACKGROUND AND AIMS:Flavonoids have the potential to serve as antioxidants in addition to their function of UV screening in photoprotective mechanisms. However, flavonoids have long been reported to accumulate mostly in epidermal cells and surface organs in response to high sunlight. Therefore, how leaf flavonoids actu...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcp177

    authors: Agati G,Stefano G,Biricolti S,Tattini M

    更新日期:2009-10-01 00:00:00

  • Genetic identity affects performance of species in grasslands of different plant diversity: an experiment with Lolium perenne cultivars.

    abstract:BACKGROUND AND AIMS:Recent biodiversity research has focused on ecosystem processes, but less is known about responses of populations of individual plant species to changing community diversity and implications of genetic variation within species. To address these issues, effects of plant community diversity on the per...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcn070

    authors: Roscher C,Schumacher J,Weisser WW,Schulze ED

    更新日期:2008-07-01 00:00:00

  • Biosystematics and conservation: a case study with two enigmatic and uncommon species of Crassula from New Zealand.

    abstract:BACKGROUND AND AIMS:Crassula hunua and C. ruamahanga have been taxonomically controversial. Here their distinctiveness is assessed so that their taxonomic and conservation status can be clarified. METHODS:Populations of these two species were analysed using morphological, chromosomal and DNA sequence data. KEY RESULT...

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    pub_type: 杂志文章

    doi:10.1093/aob/mcm294

    authors: De Lange PJ,Heenan PB,Keeling DJ,Murray BG,Smissen R,Sykes WR

    更新日期:2008-04-01 00:00:00

  • A model for an early stage of tomato fruit development: cell multiplication and cessation of the cell proliferative activity.

    abstract::Changes in cell number during the early period of tomato fruit development were analysed by means of a deterministic model of cell multiplication. The period commenced at the seed stage with one theoretical cell undergoing intensive cell division, and ended when the cell number became nearly constant. The model takes ...

    journal_title:Annals of botany

    pub_type: 杂志文章

    doi:10.1093/aob/mcg111

    authors: Bertin N,Genard M,Fishman S

    更新日期:2003-07-01 00:00:00

  • The concept of the eudicot shoot apical meristem as it applies to four Spiraea (Rosaceae), one Mentha (Lamiaceae) and one Euonymus (Celastraceae) cultivars based on chimeric analysis.

    abstract:BACKGROUND AND AIMS:Eversporting eudicots were sought to see if they behave like gymnosperms. Behaviour of eversporting gymnosperm chimeras indicates a single apical cell is present in SAM and it would be of interest to see if eudicot chimeras have the same behaviour. METHODS:Four eversporting spireas, the pineapple m...

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    pub_type: 杂志文章

    doi:10.1093/aob/mct054

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    更新日期:2013-05-01 00:00:00

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    pub_type: 杂志文章

    doi:10.1093/aob/mcf096

    authors: Noctor G,Veljovic-Jovanovic S,Driscoll S,Novitskaya L,Foyer CH

    更新日期:2002-06-01 00:00:00

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    doi:10.1093/aob/mcy103

    authors: Sun H,Duan Y,Qi X,Zhang L,Huo H,Gong H

    更新日期:2018-09-24 00:00:00

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    pub_type: 杂志文章

    doi:10.1093/aob/mcz123

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    abstract:Background and Aims:Studies of phenotypic plasticity in plants have mainly focused on (1) the effect of environmental variation on whole-plant traits related to the number of modules rather than on (2) the phenotypic consequences of environmental variation in traits of individual modules. Since environmental and develo...

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    doi:10.1093/aob/mcx093

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    更新日期:2017-10-17 00:00:00