Integrity and function of the Saccharomyces cerevisiae spindle pole body depends on connections between the membrane proteins Ndc1, Rtn1, and Yop1.

Abstract:

:The nuclear envelope in Saccharomyces cerevisiae harbors two essential macromolecular protein assemblies: the nuclear pore complexes (NPCs) that enable nucleocytoplasmic transport, and the spindle pole bodies (SPBs) that mediate chromosome segregation. Previously, based on metazoan and budding yeast studies, we reported that reticulons and Yop1/DP1 play a role in the early steps of de novo NPC assembly. Here, we examined if Rtn1 and Yop1 are required for SPB function in S. cerevisiae. Electron microscopy of rtn1Δ yop1Δ cells revealed lobular abnormalities in SPB structure. Using an assay that monitors lateral expansion of the SPB central layer, we found that rtn1Δ yop1Δ SPBs had decreased connections to the NE compared to wild type, suggesting that SPBs are less stable in the NE. Furthermore, large budded rtn1Δ yop1Δ cells exhibited a high incidence of short mitotic spindles, which were frequently misoriented with respect to the mother-daughter axis. This correlated with cytoplasmic microtubule defects. We found that overexpression of the SPB insertion factors NDC1, MPS2, or BBP1 rescued the SPB defects observed in rtn1Δ yop1Δ cells. However, only overexpression of NDC1, which is also required for NPC biogenesis, rescued both the SPB and NPC associated defects. Rtn1 and Yop1 also physically interacted with Ndc1 and other NPC membrane proteins. We propose that NPC and SPB biogenesis are altered in cells lacking Rtn1 and Yop1 due to competition between these complexes for Ndc1, an essential common component of both NPCs and SPBs.

journal_name

Genetics

journal_title

Genetics

authors

Casey AK,Dawson TR,Chen J,Friederichs JM,Jaspersen SL,Wente SR

doi

10.1534/genetics.112.141465

subject

Has Abstract

pub_date

2012-10-01 00:00:00

pages

441-55

issue

2

eissn

0016-6731

issn

1943-2631

pii

genetics.112.141465

journal_volume

192

pub_type

杂志文章

相关文献

GENETICS文献大全
  • Evidence that sisterless-a and sisterless-b are two of several discrete "numerator elements" of the X/A sex determination signal in Drosophila that switch Sxl between two alternative stable expression states.

    abstract::The primary signal for Drosophila sex determination is the number of X chromosomes relative to the number of sets of autosomes. The present report shows that the numerator of this X/A signal appears to be determined by the cumulative dose of a relatively limited number of discrete X-linked genetic elements, two of whi...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Cline TW

    更新日期:1988-08-01 00:00:00

  • X chromosome duplications affect a region of the chromosome they do not duplicate in Caenorhabditis elegans.

    abstract::X chromosome duplications have been used previously to vary the dose of specific regions of the X chromosome to study dosage compensation and sex determination in Caenorhabditis elegans. We show here that duplications suppress and X-linked hypomorphic mutation and elevate the level of activity of an X-linked enzyme, a...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Meneely PM,Nordstrom KD

    更新日期:1988-06-01 00:00:00

  • Using allele frequencies and geographic subdivision to reconstruct gene trees within a species: molecular variance parsimony.

    abstract::We formalize the use of allele frequency and geographic information for the construction of gene trees at the intraspecific level and extend the concept of evolutionary parsimony to molecular variance parsimony. The central principle is to consider a particular gene tree as a variable to be optimized in the estimation...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Excoffier L,Smouse PE

    更新日期:1994-01-01 00:00:00

  • Selective Strolls: Fixation and Extinction in Diploids Are Slower for Weakly Selected Mutations Than for Neutral Ones.

    abstract::In finite populations, an allele disappears or reaches fixation due to two main forces, selection and drift. Selection is generally thought to accelerate the process: a selected mutation will reach fixation faster than a neutral one, and a disadvantageous one will quickly disappear from the population. We show that ev...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.115.178160

    authors: Mafessoni F,Lachmann M

    更新日期:2015-12-01 00:00:00

  • Multi-trait Genomic Selection Methods for Crop Improvement.

    abstract::Plant breeders make selection decisions based on multiple traits, such as yield, plant height, flowering time, and disease resistance. A commonly used approach in multi-trait genomic selection is index selection, which assigns weights to different traits relative to their economic importance. However, classical index ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.120.303305

    authors: Moeinizade S,Kusmec A,Hu G,Wang L,Schnable PS

    更新日期:2020-08-01 00:00:00

  • A new resource for characterizing X-linked genes in Drosophila melanogaster: systematic coverage and subdivision of the X chromosome with nested, Y-linked duplications.

    abstract::Interchromosomal duplications are especially important for the study of X-linked genes. Males inheriting a mutation in a vital X-linked gene cannot survive unless there is a wild-type copy of the gene duplicated elsewhere in the genome. Rescuing the lethality of an X-linked mutation with a duplication allows the mutat...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.110.123265

    authors: Cook RK,Deal ME,Deal JA,Garton RD,Brown CA,Ward ME,Andrade RS,Spana EP,Kaufman TC,Cook KR

    更新日期:2010-12-01 00:00:00

  • Cladistic structure within the human Lipoprotein lipase gene and its implications for phenotypic association studies.

    abstract::Haplotype variation in 9.7 kb of genomic DNA sequence from the human lipoprotein lipase (LPL) gene was scored in three populations: African-Americans from Jackson, Mississippi (24 individuals), Finns from North Karelia, Finland (24), and non-Hispanic whites from Rochester, Minnesota (23). Earlier analyses had indicate...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Templeton AR,Weiss KM,Nickerson DA,Boerwinkle E,Sing CF

    更新日期:2000-11-01 00:00:00

  • Genetic and genomic tools for the marine annelid Platynereis dumerilii.

    abstract::The bristle worm Platynereis dumerilii displays many interesting biological characteristics. These include its reproductive timing, which is synchronized to the moon phase, its regenerative capacity that is hormonally controlled, and a slow rate of evolution, which permits analyses of ancestral genes and cell types. A...

    journal_title:Genetics

    pub_type: 杂志文章,评审

    doi:10.1534/genetics.112.148254

    authors: Zantke J,Bannister S,Rajan VB,Raible F,Tessmar-Raible K

    更新日期:2014-05-01 00:00:00

  • Disequilibrium pattern analysis. II. Application to Danish HLA A and B locus data.

    abstract::Disequilibrium pattern analysis, a general method for analyzing evolutionary events acting on pairs of tightly linked polymorphic loci, is applied to a large sample of Danish individuals typed for A and B loci of the HLA (human leukocyte antigen) system. Cases of selection on particular haplotypes are revealed from pa...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Klitz W,Thomson G

    更新日期:1987-08-01 00:00:00

  • High-resolution sex-specific linkage maps of the mouse reveal polarized distribution of crossovers in male germline.

    abstract::Since the publication of the first comprehensive linkage map for the laboratory mouse, the architecture of recombination as a basic biological process has become amenable to investigation in mammalian model organisms. Here we take advantage of high-density genotyping and the unique pedigree structure of the incipient ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.114.161653

    authors: Liu EY,Morgan AP,Chesler EJ,Wang W,Churchill GA,Pardo-Manuel de Villena F

    更新日期:2014-05-01 00:00:00

  • Extended Region of Nodulation Genes in Rhizobium meliloti 1021. II. Nucleotide Sequence, Transcription Start Sites and Protein Products.

    abstract::We have established the DNA sequence and analyzed the transcription and translation products of a series of putative nodulation (nod) genes in Rhizobium meliloti strain 1021. Four loci have been designated nodF, nodE, nodG and nodH. The correlation of transposon insertion positions with phenotypes and open reading fra...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Fisher RF,Swanson JA,Mulligan JT,Long SR

    更新日期:1987-10-01 00:00:00

  • Serial-Section Analysis of Clustering within Anthers of Maize Microsporocytes with Specific Crossovers.

    abstract::The distribution within anthers of maize plants of microsporocytes of differing crossover class was studied by application of the serial-sectioning technique to plants heterozygous for a paracentric inversion. In such material, cells with four-strand double crossovers within the inversion are distinguishable from cell...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Maguire MP

    更新日期:1980-05-01 00:00:00

  • Mapping quantitative trait loci for expression abundance.

    abstract::Mendelian loci that control the expression levels of transcripts are called expression quantitative trait loci (eQTL). When mapping eQTL, we often deal with thousands of expression traits simultaneously, which complicates the statistical model and data analysis. Two simple approaches may be taken in eQTL analysis: (1)...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.106.065599

    authors: Jia Z,Xu S

    更新日期:2007-05-01 00:00:00

  • Modeling the zebrafish segmentation clock's gene regulatory network constrained by expression data suggests evolutionary transitions between oscillating and nonoscillating transcription.

    abstract::During segmentation of vertebrate embryos, somites form in accordance with a periodic pattern established by the segmentation clock. In the zebrafish (Danio rerio), the segmentation clock includes six hairy/enhancer of split-related (her/hes) genes, five of which oscillate due to negative autofeedback. The nonoscillat...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.114.163642

    authors: Schwendinger-Schreck J,Kang Y,Holley SA

    更新日期:2014-06-01 00:00:00

  • An implanted recombination hot spot stimulates recombination and enhances sister chromatid cohesion of heterologous YACs during yeast meiosis.

    abstract::Heterologous yeast artificial chromosomes (YACs) do not recombine with each other and missegregate in 25% of meiosis I events. Recombination hot spots in the yeast Saccharomyces cerevisiae have previously been shown to be associated with sites of meiosis-induced double-strand breaks (DSBs). A 6-kb fragment containing ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Sears DD,Hieter P,Simchen G

    更新日期:1994-12-01 00:00:00

  • Sequence finishing and gene mapping for Candida albicans chromosome 7 and syntenic analysis against the Saccharomyces cerevisiae genome.

    abstract::The size of the genome in the opportunistic fungus Candida albicans is 15.6 Mb. Whole-genome shotgun sequencing was carried out at Stanford University where the sequences were assembled into 412 contigs. C. albicans is a diploid basically, and analysis of the sequence is complicated due to repeated sequences and to se...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.104.034652

    authors: Chibana H,Oka N,Nakayama H,Aoyama T,Magee BB,Magee PT,Mikami Y

    更新日期:2005-08-01 00:00:00

  • The let-60 locus controls the switch between vulval and nonvulval cell fates in Caenorhabditis elegans.

    abstract::During induction of the Caenorhabditis elegans hermaphrodite vulva by the anchor cell of the gonad, six multipotent vulval precursor cells (VPCs) have two distinct fates: three VPCs generate the vulva and the other three VPCs generate nonspecialized hypodermis. Genes that control the fates of the VPCs in response to t...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Han M,Aroian RV,Sternberg PW

    更新日期:1990-12-01 00:00:00

  • Parallel genetic and proteomic screens identify Msps as a CLASP-Abl pathway interactor in Drosophila.

    abstract::Regulation of cytoskeletal structure and dynamics is essential for multiple aspects of cellular behavior, yet there is much to learn about the molecular machinery underlying the coordination between the cytoskeleton and its effector systems. One group of proteins that regulate microtubule behavior and its interaction ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.110.115626

    authors: Lowery LA,Lee H,Lu C,Murphy R,Obar RA,Zhai B,Schedl M,Van Vactor D,Zhan Y

    更新日期:2010-08-01 00:00:00

  • Dating the primigenial C4-CYP21 duplication in primates.

    abstract::C4 and CYP21 are two adjacent, but functionally unrelated genes residing in the middle of the mammalian major histocompatibility complex (Mhc). The C4 gene codes for the fourth component of the complement cascade, whereas the CYP21 gene specifies an enzyme (cytochrome P450c21) of the glucocorticoid and mineralocortico...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Horiuchi Y,Kawaguchi H,Figueroa F,O'hUigin C,Klein J

    更新日期:1993-05-01 00:00:00

  • The N-terminal DNA-binding domain of Rad52 promotes RAD51-independent recombination in Saccharomyces cerevisiae.

    abstract::In Saccharomyces cerevisiae, the Rad52 protein plays a role in both RAD51-dependent and RAD51-independent recombination pathways. We characterized a rad52 mutant, rad52-329, which lacks the C-terminal Rad51-interacting domain, and studied its role in RAD51-independent recombination. The rad52-329 mutant is completely ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Tsukamoto M,Yamashita K,Miyazaki T,Shinohara M,Shinohara A

    更新日期:2003-12-01 00:00:00

  • Nearly identical paralogs: implications for maize (Zea mays L.) genome evolution.

    abstract::As an ancient segmental tetraploid, the maize (Zea mays L.) genome contains large numbers of paralogs that are expected to have diverged by a minimum of 10% over time. Nearly identical paralogs (NIPs) are defined as paralogous genes that exhibit > or = 98% identity. Sequence analyses of the "gene space" of the maize i...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.106.064006

    authors: Emrich SJ,Li L,Wen TJ,Yandeau-Nelson MD,Fu Y,Guo L,Chou HH,Aluru S,Ashlock DA,Schnable PS

    更新日期:2007-01-01 00:00:00

  • Hardy-Weinberg testing of a single homozygous genotype.

    abstract::No proper statistical test is available for the evaluation of deviation of a single homozygous genotype from Hardy-Weinberg equilibrium (HWE) proportion. We propose a 1-d.f. chi2-test. The power of the proposed test is favorable compared to existing HWE testing procedures. The applications of this test are discussed. ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.105.043190

    authors: Chen JJ,Duan T,Single R,Mather K,Thomson G

    更新日期:2005-07-01 00:00:00

  • Hybrid incompatibility despite pleiotropic constraint in a sequence-based bioenergetic model of transcription factor binding.

    abstract::Hybrid incompatibility can result from gene misregulation produced by divergence in trans-acting regulatory factors and their cis-regulatory targets. However, change in trans-acting factors may be constrained by pleiotropy, which would in turn limit the evolution of incompatibility. We employed a mechanistically expli...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.114.171397

    authors: Tulchinsky AY,Johnson NA,Porter AH

    更新日期:2014-12-01 00:00:00

  • High frequency of mutations that expand the host range of an RNA virus.

    abstract::The ability of a virus population to colonize a novel host is predicted to depend on the equilibrium frequency of potential colonists (i.e., genotypes capable of infecting the novel host) in the source population. In this study, we investigated the determinants of the equilibrium frequency of potential colonists in th...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.106.064634

    authors: Ferris MT,Joyce P,Burch CL

    更新日期:2007-06-01 00:00:00

  • Two alternative transcripts coding for alcohol dehydrogenase accumulate with different developmental specificities in different species of picture-winged Drosophila.

    abstract::Two alternate transcripts of the single copy Alcohol dehydrogenase (Adh) gene accumulate with developmental specificity in all of 12 species of Hawaiian picture-winged Drosophila which have been examined. Relative to the paradigm species D. affinidisjuncta, the Adh transcript normally restricted to larvae is found to ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Rowan RG,Dickinson WJ

    更新日期:1986-10-01 00:00:00

  • Drug-sensitive DNA polymerase δ reveals a role for mismatch repair in checkpoint activation in yeast.

    abstract::We have used a novel method to activate the DNA damage S-phase checkpoint response in Saccharomyces cerevisiae to slow lagging-strand DNA replication by exposing cells expressing a drug-sensitive DNA polymerase δ (L612M-DNA pol δ) to the inhibitory drug phosphonoacetic acid (PAA). PAA-treated pol3-L612M cells arrest a...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.111.131938

    authors: Reha-Krantz LJ,Siddique MS,Murphy K,Tam A,O'Carroll M,Lou S,Schultz A,Boone C

    更新日期:2011-12-01 00:00:00

  • Linkage relationships reflecting ancestral tetraploidy in salmonid fish.

    abstract::Fifteen classical linkage groups were identified in two salmonid species (Salmo trutta and Salmo gairdneri) and three fertile, interspecific hybrids (S. gairdneri X Salmo clarki, Salvelinus fontinalis X Salvelinus namaycush and S. fontinalis X Salvelinus alpinus) by backcrossing multiply heterozygous individuals. Thes...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Johnson KR,Wright JE Jr,May B

    更新日期:1987-08-01 00:00:00

  • Mapping a quantitative trait locus involved in melanotic encapsulation of foreign bodies in the malaria vector, Anopheles gambiae.

    abstract::A Plasmodium-refractory strain of Anopheles gambiae melanotically encapsulates many species of Plasmodium, whereas wild-type mosquitoes are usually susceptible. This encapsulation trait can also be observed by studying the response of refractory and susceptible strains to intrathoracically injected CM-Sephadex beads. ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Gorman MJ,Severson DW,Cornel AJ,Collins FH,Paskewitz SM

    更新日期:1997-07-01 00:00:00

  • Replication-dependent sister chromatid recombination in rad1 mutants of Saccharomyces cerevisiae.

    abstract::Homolog recombination and unequal sister chromatid recombination were monitored in rad1-1/rad1-1 diploid yeast cells deficient for excision repair, and in control cells, RAD1/rad1-1, after exposure to UV irradiation. In a rad1-1/rad1-1 diploid, UV irradiation stimulated much more sister chromatid recombination relativ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Kadyk LC,Hartwell LH

    更新日期:1993-03-01 00:00:00

  • Evolution of mouse T-box genes by tandem duplication and cluster dispersion.

    abstract::The T-box genes comprise an ancient family of putative transcription factors conserved across species as divergent as Mus musculus and Caenorhabditis elegans. All T-box gene products are characterized by a novel 174-186-amino acid DNA binding domain called the T-box that was first discovered in the polypeptide product...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Agulnik SI,Garvey N,Hancock S,Ruvinsky I,Chapman DL,Agulnik I,Bollag R,Papaioannou V,Silver LM

    更新日期:1996-09-01 00:00:00