Identification and characterization of polymorphic microsatellite loci in the blue shark Prionace glauca, and cross-amplification in other shark species.

Abstract:

:Two to 14 alleles were found to be segregating per locus (mean 5·2), with observed and expected heterozygosities ranging from 0·08 to 0·78 and 0·08 to 0·94, respectively. Cross-amplification of six of these microsatellite loci indicated that they are also polymorphic in three species of Carcharhiniformes and two species of Lamniformes. The newly developed primers reported here constitute a useful tool for genetic population analyses on Prionace glauca and, potentially, other related species.

journal_name

J Fish Biol

journal_title

Journal of fish biology

authors

Mendonça FF,Ussami LH,Hashimoto DT,Pereira LH,Porto-Foresti F,Oliveira C,Gadig OB,Foresti F

doi

10.1111/j.1095-8649.2012.03291.x

subject

Has Abstract

pub_date

2012-06-01 00:00:00

pages

2643-6

issue

7

eissn

0022-1112

issn

1095-8649

journal_volume

80

pub_type

杂志文章
  • Characterizing the biological traits and life history of Acanthopagrus (Sparidae) hybrid complexes: implications for conservation and management.

    abstract::This study examined the spatio-temporal reproductive patterns, population structure, maturity and growth of Acanthopagrus hybrid complexes, which comprise mainly black bream Acanthopagrus butcheri and the hybrids they form with yellowfin bream Acanthopagrus australis, in two Australian estuaries (Coila and Brou Lakes,...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2012.03401.x

    authors: Ochwada-Doyle F,Roberts D,Gray C,Barnes L,Haddy J,Fearman J

    更新日期:2012-10-01 00:00:00

  • From population genomics to conservation and management: a workflow for targeted analysis of markers identified using genome-wide approaches in Atlantic salmon Salmo salar.

    abstract::A genotyping assay for the Ion Torrent Ion PGM platform was developed for fast and cost-effective targeted genotyping of key single nucleotide polymorphisms (SNPs) earlier identified using a genome-wide SNP array in Atlantic salmon Salmo salar. The method comprised a simple primer design step for multiplex-polymerase ...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13149

    authors: Aykanat T,Lindqvist M,Pritchard VL,Primmer CR

    更新日期:2016-12-01 00:00:00

  • Variation in rod spectral sensitivity of fishes is best predicted by habitat and depth.

    abstract::Rod spectral sensitivity data (λmax ), measured by microspectrophotometry, were compiled for 403 species of ray-finned fishes in order to examine four hypothesized predictors of rod spectral sensitivity (depth, habitat, diet and temperature). From this database, a subset of species that were known to be adults and ava...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13859

    authors: Schweikert LE,Caves EM,Solie SE,Sutton TT,Johnsen S

    更新日期:2019-07-01 00:00:00

  • Effect of Flavobacterium columnare inoculation, antibiotic treatments and resident bacteria on rainbow trout Oncorhynchus mykiss eyed egg survival and external membrane structure.

    abstract::This study was conducted to evaluate the potential pathogenicity of the bacterium Flavobacterium columnare on rainbow trout Oncorhynchus mykiss eyed eggs. Survival to hatching was unaffected by the inclusion in the incubation water of either 300 colony-forming units (CFU) ml(-1) or 3000 CFU ml(-1) of F. columnare at e...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2008.02147.x

    authors: Barnes ME,Bergmann D,Jacobs J,Gabel M

    更新日期:2009-02-01 00:00:00

  • Oxygen consumption rate v. rate of energy utilization of fishes: a comparison and brief history of the two measurements.

    abstract::Accounting for energy use by fishes has been taking place for over 200 years. The original, and continuing gold standard for measuring energy use in terrestrial animals, is to account for the waste heat produced by all reactions of metabolism, a process referred to as direct calorimetry. Direct calorimetry is not easy...

    journal_title:Journal of fish biology

    pub_type: 历史文章,杂志文章,评审

    doi:10.1111/jfb.12824

    authors: Nelson JA

    更新日期:2016-01-01 00:00:00

  • Adaptation to sea level rise: does local adaptation influence the demography of coastal fish populations?

    abstract::This study compared the growth of two western mosquitofish Gambusia affinis populations that were previously demonstrated to have genetic adaptations that increased survival under lethal salinity exposures. The objective was to evaluate how genetic adaptations to lethal salinity stress affect population demography whe...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2010.02727.x

    authors: Purcell KM,Klerks PL,Leberg PL

    更新日期:2010-10-01 00:00:00

  • New distribution data and population structure of the European mudminnow Umbra krameri in Serbia and Bosnia and Herzegovina.

    abstract::Seventy-six individuals of the European mudminnow Umbra krameri from two recent populations from Serbia (Bakreni Batar and Lugomir) and one from Bosnia and Herzegovina (Gromiželj) were analysed for habitat preferences and population structure. The population from Lugomir is a newly recorded population in Serbia. Besid...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12183

    authors: Sekulić N,Marić S,Galambos L,Radošević D,Krpo-Ćetković J

    更新日期:2013-09-01 00:00:00

  • Hybridization between pallid sturgeon Scaphirhynchus albus and shovelnose sturgeon Scaphirhynchus platorynchus.

    abstract::This study found that introgressive hybridization of the pallid sturgeon Scaphirhynchus albus with the common shovelnose sturgeon Scaphirhynchus platorynchus has probably occurred across the range of S. albus. Bayesian clustering found evidence of hybridization in all management units of S. albus. Some individuals wer...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2011.03123.x

    authors: Schrey AW,Boley R,Heist EJ

    更新日期:2011-12-01 00:00:00

  • Phylogeography of isolated freshwater three-spined stickleback Gasterosteus aculeatus populations in the Adriatic Sea basin.

    abstract::Analyses of mitochondrial (mt) DNA and microsatellite variation were carried out to examine the relationships between 10 freshwater populations of three-spined sticklebacks Gasterosteus aculeatus along the eastern coast of the Adriatic Sea. Partial sequences of the mtDNA control region and cytochrome b gene, in additi...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2011.03147.x

    authors: DeFaveri J,Zanella LN,Zanella D,Mrakovčić M,Merilä J

    更新日期:2012-01-01 00:00:00

  • Trophic behaviour of juvenile reef fishes inhabiting interlinked mangrove-seagrass habitats in offshore mangrove islets.

    abstract::Stable isotope (δ(13)C and δ(15)N) and gut content analyses were used to investigate size-related feeding habits of four reef fishes (the beaugregory Stegastes leucostictus, the french grunt Haemulon flavolineatum, the schoolmaster snapper Lutjanus apodus and the yellowtail snapper Ocyurus chrysurus) inhabiting an off...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12715

    authors: Vaslet A,Phillips DL,France CA,Feller IC,Baldwin CC

    更新日期:2015-08-01 00:00:00

  • Validated age, growth and maturity of the bonnethead Sphyrna tiburo in the western North Atlantic Ocean.

    abstract::The age, growth and maturity of bonnetheads Sphyrna tiburo inhabiting the estuarine and coastal waters of the western North Atlantic Ocean (WNA) from Onslow Bay, North Carolina, south to West Palm Beach, Florida, were examined. Vertebrae were collected and aged from 329 females and 217 males ranging in size from 262 t...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12450

    authors: Frazier BS,Driggers WB 3rd,Adams DH,Jones CM,Loefer JK

    更新日期:2014-09-01 00:00:00

  • Description of a new Pimelodella (Siluriformes: Heptapteridae) species with a discussion on the upper pectoral girdle homology of Siluriformes.

    abstract::A new species of Pimelodella is described from several right-bank tributaries of the Rio Madeira basin in Amazonas and Rondônia states, Brazil. The new species differs from all congeners by the supraoccipital process not reaching the anterior nuchal plate, 43-45 total vertebrae, maxillary barbels reaching between adpr...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13795

    authors: Slobodian V,Pastana MNL

    更新日期:2018-11-01 00:00:00

  • Vigour-related traits and immunity in hybrids of evolutionary divergent cyprinoid species: advantages of hybrid heterosis?

    abstract::Hybrid advantage, described as the superiority of hybrids in some traits over their parents and termed the "heterosis effect," is widely documented in the case of reciprocal crosses of parental species (i.e., hybrids representing the F1 generation). In fish, high survival, fast growth and better health status have bee...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.14648

    authors: Šimková A,Janáč M,Hyršl P,Krasnovyd V,Vetešník L

    更新日期:2020-12-19 00:00:00

  • In vivo treatment with progestogens causes immunosuppression of carp Cyprinus carpio leucocytes by affecting nitric oxide production and arginase activity.

    abstract::In this study, carp Cyprinus carpio were injected with various steroid compounds, including synthetic and natural progestogens and the glucocorticoid cortisol, to investigate effects on leucocytes isolated from their kidneys. Injection of cortisol led to an increased spleeno-somatic index (I(S)) on day 21 post-injecti...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2011.02981.x

    authors: Pietsch C,Neumann N,Preuer T,Kloas W

    更新日期:2011-07-01 00:00:00

  • The influence of various reef sounds on coral-fish larvae behaviour.

    abstract::The swimming behaviour of coral-reef fish larvae from 20 species of 10 different families was tested under natural and artificial sound conditions. Underwater sounds from reef habitats (barrier reef, fringing reef and mangrove) as well as a white noise were broadcasted in a choice chamber experiment. Sixteen of the 20...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12651

    authors: Parmentier E,Berten L,Rigo P,Aubrun F,Nedelec SL,Simpson SD,Lecchini D

    更新日期:2015-05-01 00:00:00

  • The effect of environmental colour on the growth, metabolism, physiology and skin pigmentation of the carnivorous freshwater catfish Lophiosilurus alexandri.

    abstract::The growth, physiology and skin pigmentation of pacamã Lophiosilurus alexandri juveniles were evaluated in an experiment using different tank colours (white, yellow, green, blue, brown and black) over an 80 day period. The tank colours did not cause significant differences to final body mass, total length, survival ra...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13208

    authors: Costa DC,Mattioli CC,Silva WS,Takata R,Leme FO,Oliveira AL,Luz RK

    更新日期:2017-03-01 00:00:00

  • Aspects of the reproductive biology of two pelagic sharks in the eastern Atlantic Ocean.

    abstract::This study used data provided by the Chinese Longline Fishery Scientific Observer Programme from the tropical eastern Atlantic Ocean to estimate the reproductive parameters of the blue shark (Prionace glauca) and crocodile shark (Pseudocarcharias kamoharai). Sizes ranged from 80 to 298 cm fork length (FL) for blue sha...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.14526

    authors: Wu F,Kindong R,Dai X,Sarr O,Zhu J,Tian S,Li Y,Nsangue BTN

    更新日期:2020-12-01 00:00:00

  • First record of a spawning aggregation for the tropical eastern Pacific endemic grouper Mycteroperca olfax in the Galapagos Marine Reserve.

    abstract::This study provides direct and indirect evidence of temporally and spatially consistent spawning aggregations for the grouper Mycteroperca olfax. Recently reported declines in population numbers, probably related to the direct targeting of aggregations by artisanal fishermen, highlight the urgent need for species-spec...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12703

    authors: Salinas-de-León P,Rastoin E,Acuña-Marrero D

    更新日期:2015-07-01 00:00:00

  • Ontogenesis of opercular deformities in gilthead sea bream Sparus aurata: a histological description.

    abstract::The aim of this study was to characterize histological changes during opercular osteogenesis in farmed gilthead sea bream Sparus aurata larvae from 7 to 69 days post hatching (dph) and compare normal osteogenesis with that of deformed opercles. Mild opercular deformities were first detected in 19 dph larvae by folding...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13460

    authors: Thuong NP,Verstraeten B,Kegel BD,Christiaens J,Wolf TD,Sorgeloos P,Bonte D,Adriaens D

    更新日期:2017-11-01 00:00:00

  • Spatial distribution of nominally herbivorous fishes across environmental gradients on Brazilian rocky reefs.

    abstract::Assemblages of roving herbivores were consistently different between eastern, warmer, sheltered sites and western, colder, more wave-exposed sites. At eastern sites, detritivorous-herbivorous species dominated while omnivores had the highest biomass and were dominant at western sites. Macroalgivores did not show any t...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12849

    authors: Cordeiro CA,Mendes TC,Harborne AR,Ferreira CE

    更新日期:2016-07-01 00:00:00

  • Phylogeographic structure of brown trout Salmo trutta in Britain and Ireland: glacial refugia, postglacial colonization and origins of sympatric populations.

    abstract::The phylogeographical structure of brown trout Salmo trutta in Britain and Ireland was studied using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) analysis of four mitochondrial DNA segments (16S/ND1, ND5/6, COXIII/ND5 and ND5/12S). Analysis of 3636 individuals from 83 sites-morphotypes...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2009.02490.x

    authors: McKeown NJ,Hynes RA,Duguid RA,Ferguson A,Prodöhl PA

    更新日期:2010-02-01 00:00:00

  • Modelling gastric evacuation in gadoids feeding on crustaceans.

    abstract::A mechanistic, prey surface-dependent model was expanded to describe the course and rate of gastric evacuation in predatory fishes feeding on crustacean prey with robust exoskeletons. This was accomplished by adding a layer of higher resistance to the digestive processes outside the inner softer parts of a prey cylind...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12976

    authors: Andersen NG,Chabot D,Couturier CS

    更新日期:2016-05-01 00:00:00

  • A new species of Petroleuciscus (Teleostei: Cyprinidae) from the Büyük Menderes River, southwestern Anatolia, Turkey.

    abstract::Petroleuciscus ninae sp. nov. is described from the Büyük Menderes River drainage. The new species is distinguished by having a black lateral stripe from head to base of caudal fin, stripe distinct anteriorly and posteriorly, wider than eye diameter; numerous black pigments on anal-fin rays; body depth at dorsal-fin o...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13525

    authors: Turan D,Kalayci G,Kaya C,Bektaş Y,Küçük F

    更新日期:2018-04-01 00:00:00

  • Hypoxic refuges, predator-prey interactions and habitat selection by fishes.

    abstract::Localized hypoxic habitats were created in Delta Marsh, Manitoba, Canada to determine the potential of regions of moderate hypoxia to act as refuges for forage fishes from piscine predators. Minnow traps and giving-up density (GUD) plates (plexiglas plates covered with trout crumble and fine gravel) were used to asses...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12585

    authors: Hedges KJ,Abrahams MV

    更新日期:2015-01-01 00:00:00

  • Morphological and functional aspects of the epidermis of the sea lamprey Petromyzon marinus throughout development.

    abstract::The development of the epidermis of sea lamprey Petromyzon marinus along the whole life cycle was studied using conventional staining techniques and lectin histochemistry. The epidermis undergoes variations in morphology and thickness throughout development. The simple cuboidal epithelium found in the epidermis of pro...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13330

    authors: Rodríguez-Alonso R,Megías M,Pombal MA,Molist P

    更新日期:2017-07-01 00:00:00

  • Reef fish structure and distribution in a south-western Atlantic Ocean tropical island.

    abstract::The community structure of the reef fish fauna of Trindade Island, a volcanic oceanic island located 1160 km off the coast of Brazil, is described based on intensive visual censuses. Seventy-six species were encountered in 252 censuses, with mean ± S.E. of 99 ± 3 individuals and 15.7 ± 0.3 species 40 m(-2) transect. T...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2011.03138.x

    authors: Pinheiro HT,Ferreira CE,Joyeux JC,Santos RG,Horta PA

    更新日期:2011-12-01 00:00:00

  • Change in food ingestion induces rapid shifts in the diversity of microbiota associated with cutaneous mucus of Atlantic salmon Salmo salar.

    abstract::To test the hypothesis that a switch in diet might cause changes in the abundance and composition of mucous-dwelling microorganisms, a short-term experiment was conducted with Atlantic salmon Salmo salar. Fish were fed on three different diets: pelleted S. salar feed, macroinvertebrates or pellets supplemented with an...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12025

    authors: Landeira-Dabarca A,Sieiro C,Álvarez M

    更新日期:2013-03-01 00:00:00

  • Photoreceptors and eyes of pikeperch Sander lucioperca, pike Esox lucius, perch Perca fluviatilis and roach Rutilus rutilus from a clear and a brown lake.

    abstract::The photoreceptors and eyes of four fish species commonly cohabiting Fennoscandian lakes with different light transmission properties were compared: pikeperch Sander lucioperca, pike Esox lucius, perch Perca fluviatilis and roach Rutilus rutilus. Each species was represented by individuals from a clear (greenish) and ...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13759

    authors: Jokela-Määttä M,Viljanen M,Nevala N,Donner K,Brönmark C

    更新日期:2019-07-01 00:00:00

  • Masking a fish's detection of environmental stimuli: application to improving downstream migration at river infrastructure.

    abstract::According to Signal Detection Theory, the ability to detect a stimulus (discriminability, d') is inversely related to the magnitude of internal and external noise. In this study, downstream moving brown trout Salmo trutta were used to investigate whether external hydrodynamic noise (in this case turbulence) could mask...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13812

    authors: Kerr JR,Kemp PS

    更新日期:2019-07-01 00:00:00

  • A three-phase excess post-exercise oxygen consumption in Atlantic salmon Salmo salar and its response to exercise training.

    abstract::The recovery of oxygen uptake to the standard metabolic rate (SMR) following exhaustive chasing exercise in Atlantic salmon Salmo salar parr occurred in three phases (rapid, plateau and slow). The initial recovery phase lasted 0·7 h and contributed 16% to the total excess post-exercise oxygen consumption (EPOC). It wa...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13593

    authors: Zhang Y,Claireaux G,Takle H,Jørgensen SM,Farrell AP

    更新日期:2018-05-01 00:00:00