Torque measurements reveal sequence-specific cooperative transitions in supercoiled DNA.

abstract：:Angiosperms are the largest and most successful clade of land plants with >250,000 species distributed in nearly every terrestrial habitat. Many phylogenetic studies have been based on DNA sequences of one to several genes, but, despite decades of intensive efforts, relationships among early diverging lineages and sev...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Jansen RK,Cai Z,Raubeson LA,Daniell H,Depamphilis CW,Leebens-Mack J,Müller KF,Guisinger-Bellian M,Haberle RC,Hansen AK,Chumley TW,Lee SB,Peery R,McNeal JR,Kuehl JV,Boore JL

更新日期：2007-12-04 00:00:00

abstract：:Fermions need to satisfy the Pauli exclusion principle: no two can be in the same state. This restriction is most compactly expressed in a second quantization formalism by the requirement that the creation and annihilation operators of the electrons satisfy anticommutation relations. The usual classical limit of quant...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Levine RD

更新日期：2000-02-29 00:00:00

abstract：:CD4(+) T cells expand after transfer into lymphopenic H-2(b) A(beta)-/- mice (I-A(beta)-, I-E(alpha)-deficient mice) but not after transfer into lymphopenic MHC II(Delta/Delta) mice (I-A(alpha)-, I-A(beta)-, I-E(alpha)-, and I-E(beta)-deficient mice), implying that in H-2(b) A(beta)-/- mice, A(alpha) chain and E(beta)...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Martin B,Bourgeois C,Dautigny N,Lucas B

更新日期：2003-05-13 00:00:00

abstract：:Cellular and molecular signals involved in axon elongation versus collateral and arbor formation may be intrinsic to developing neurons, or they may derive from targets. To identify signals regulating axon growth modes, we have developed a culture system in which trigeminal ganglion cells are challenged by various tar...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Erzurumlu RS,Jhaveri S,Takahashi H,McKay RD

更新日期：1993-08-01 00:00:00

abstract：:The D1 reaction center protein of photosystem II (PSII) is subject to light-induced damage. Degradation of damaged D1 and its replacement by nascent D1 are at the heart of a PSII repair cycle, without which photosynthesis is inhibited. In mature plant chloroplasts, light stimulates the recruitment of ribosomes specifi...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Chotewutmontri P,Barkan A

更新日期：2020-09-01 00:00:00

abstract：:The strikingly high incidence of obstructed labor due to the disproportion of fetal size and the mother's pelvic dimensions has puzzled evolutionary scientists for decades. Here we propose that these high rates are a direct consequence of the distinct characteristics of human obstetric selection. Neonatal size relativ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Mitteroecker P,Huttegger SM,Fischer B,Pavlicev M

更新日期：2016-12-20 00:00:00

abstract：:Earth's water cycle enables the incorporation of water (hydration) in mantle minerals that can influence the physical properties of the mantle. Lattice thermal conductivity of mantle minerals is critical for controlling the temperature profile and dynamics of the mantle and subducting slabs. However, the effect of hyd...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Chang YY,Hsieh WP,Tan E,Chen J

更新日期：2017-04-18 00:00:00

abstract：:Accumulation of amyloid-beta (Aβ), which is associated with Alzheimer's disease, can be caused by excess production or insufficient clearance. Because of its β-sheet structure, fibrillar Aβ is resistant to proteolysis, which would contribute to slow degradation of Aβ plaques in vivo. Fibrillar Aβ can be internalized b...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Solé-Domènech S,Rojas AV,Maisuradze GG,Scheraga HA,Lobel P,Maxfield FR

更新日期：2018-02-13 00:00:00

abstract：:Tetrahymena ribozymes hold promise for repairing genetic disorders but are largely limited by their modest splicing efficiency and low production of final therapeutic proteins. Ribozyme evolution in intact living mammalian cells would greatly facilitate the discovery of new ribozyme variants with high in vivo activity...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hasegawa S,Jackson WC,Tsien RY,Rao J

更新日期：2003-12-09 00:00:00

abstract：:MAP kinase-interacting kinase 1 and 2 (Mnk1 and Mnk2) are protein-serine/threonine kinases that are activated by ERK or p38 and phosphorylate eIF4E, which is involved in cap-dependent translation initiation. However, Mnk1/2 double knockout (Mnk-DKO) mice show normal cell growth and development despite an absence of eI...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Ueda T,Sasaki M,Elia AJ,Chio II,Hamada K,Fukunaga R,Mak TW

更新日期：2010-08-10 00:00:00

abstract：:The crystal structure of Escherichia coli ornithine transcarbamoylase (OTCase, EC 2.1.3.3) complexed with the bisubstrate analog N-(phosphonacetyl)-L-ornithine (PALO) has been determined at 2.8-A resolution. This research on the structure of a transcarbamoylase catalytic trimer with a substrate analog bound provides n...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Ha Y,McCann MT,Tuchman M,Allewell NM

更新日期：1997-09-02 00:00:00

abstract：:The glucose transporter isoform GLUT4 is found only in cells that exhibit insulin-sensitive glucose transport. To investigate the function of this transporter, L6 myoblasts were stably transfected with GLUT4 cDNA. GLUT4 underwent insulin-dependent movement to the cell surface in myoblasts overexpressing the transporte...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Lawrence JC Jr,Piper RC,Robinson LJ,James DE

更新日期：1992-04-15 00:00:00

abstract：:The region of the murine major histocompatibility complex (MHC) between the Pb (A beta 3) and Ob (A beta 2) genes controls the expression of an intracellular complex named the LMP (low molecular weight polypeptide) complex. DNA probes for at least seven different genes mapping to this region were isolated. These hybri...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cho S,Attaya M,Brown MG,Monaco JJ

更新日期：1991-06-15 00:00:00

abstract：:For the emergence of early life, the formation of biopolymers such as RNA is essential. However, the addition of nucleotide monomers to existing oligonucleotides requires millimolar concentrations. Even in such optimistic settings, no polymerization of RNA longer than about 20 bases could be demonstrated. How then cou...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Mast CB,Schink S,Gerland U,Braun D

更新日期：2013-05-14 00:00:00

abstract：:A central question in stem cell biology is whether organ homeostasis is maintained in adult organs through undifferentiated stem cells or self-duplication of specialized cell populations. To address this issue in the exocrine pancreas we analyzed the Bmi1-labeled cell lineage of pancreatic acinar cells. Previously, we...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Sangiorgi E,Capecchi MR

更新日期：2009-04-28 00:00:00

abstract：:The DNA of functional cis-regulatory modules displays extensive sequence conservation in comparisons of genomes from modestly distant species. Patches of sequence that are several hundred base pairs in length within these modules are often seen to be 80-95% identical, although the flanking sequence cannot even be alig...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cameron RA,Chow SH,Berney K,Chiu TY,Yuan QA,Krämer A,Helguero A,Ransick A,Yun M,Davidson EH

更新日期：2005-08-16 00:00:00

abstract：:The MYC family of cellular oncogenes includes c-Myc, N-myc, and L-myc, which encode transcriptional regulators involved in the control of cell proliferation and death. Accordingly, these genes become aberrantly activated and expressed in specific types of cancers. For example, c-Myc translocations occur frequently in ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Gostissa M,Ranganath S,Bianco JM,Alt FW

更新日期：2009-02-17 00:00:00

abstract：:The switch from membrane-bound to secreted IgM is accomplished by producing alternative forms of mRNA from a single mu heavy-chain gene. This process might be controlled at any of three steps--transcription termination, RNA splicing, or RNA cleavage/poly(A) addition. To distinguish between these possibilities, we have...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Danner D,Leder P

更新日期：1985-12-01 00:00:00

abstract：:Phenotypic plasticity is presumed to be involved in adaptive change toward species diversification. We thus examined how candidate genes underlying natural variation across populations might also mediate plasticity within an individual. Our implementation of an integrative "plasticity space" approach revealed that the...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Rosas U,Cibrian-Jaramillo A,Ristova D,Banta JA,Gifford ML,Fan AH,Zhou RW,Kim GJ,Krouk G,Birnbaum KD,Purugganan MD,Coruzzi GM

更新日期：2013-09-10 00:00:00

abstract：:Defining the virus-host interactions responsible for HIV-1 transmission, including the phenotypic requirements of viruses capable of establishing de novo infections, could be important for AIDS vaccine development. Previous analyses have failed to identify phenotypic properties other than chemokine receptor 5 (CCR5) a...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Parrish NF,Gao F,Li H,Giorgi EE,Barbian HJ,Parrish EH,Zajic L,Iyer SS,Decker JM,Kumar A,Hora B,Berg A,Cai F,Hopper J,Denny TN,Ding H,Ochsenbauer C,Kappes JC,Galimidi RP,West AP Jr,Bjorkman PJ,Wilen CB,Doms RW

更新日期：2013-04-23 00:00:00

abstract：:Mouse myeloma cells were pulse-labeled in vitro with (3)H-D-glucosamine and (14)C-L-leucine. Analysis on sucrose gradients revealed incorporation of both isotopes into polyribosomes and release of most of such radioactivity after treatment of labeled cells in vitro with puromycin. A mixing experiment excluded the in v...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Sherr CJ,Uhr JW

更新日期：1969-09-01 00:00:00

abstract：:To identify genetic factors that interact with social environments to impact human health, we used a bioinformatic strategy that couples expression array-based detection of environmentally responsive transcription factors with in silico discovery of regulatory polymorphisms to predict genetic loci that modulate transc...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cole SW,Arevalo JM,Takahashi R,Sloan EK,Lutgendorf SK,Sood AK,Sheridan JF,Seeman TE

更新日期：2010-03-23 00:00:00

abstract：:Methicillin-resistant Staphylococcus aureus (MRSA) represents a serious threat to the health of hospitalized patients. Attempts to reduce the spread of MRSA have largely depended on hospital hygiene and patient isolation. These measures have met with mixed success: although some countries have almost eliminated MRSA o...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cooper BS,Medley GF,Stone SP,Kibbler CC,Cookson BD,Roberts JA,Duckworth G,Lai R,Ebrahim S

更新日期：2004-07-06 00:00:00

abstract：:Multiple sclerosis is a chronic disease of the central nervous system (CNS) characterized by inflammation, demyelination, and axonal loss. The immunopathogenesis of demyelination in multiple sclerosis involves an autoantibody response to myelin oligodendrocyte glycoprotein (MOG), a type I transmembrane protein located...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Breithaupt C,Schubart A,Zander H,Skerra A,Huber R,Linington C,Jacob U

更新日期：2003-08-05 00:00:00

abstract：:We demonstrate that individual cells infected with and expressing a recombinant retrovirus carrying the Escherichia coli beta-galactosidase gene (lacZ) can be viably stained, analyzed, sorted, and cloned by fluorescence-activated cell sorting based on the levels of lacZ expressed. To accomplish this we have devised a ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Nolan GP,Fiering S,Nicolas JF,Herzenberg LA

更新日期：1988-04-01 00:00:00

abstract：:Rett syndrome is a severe neurodevelopmental disorder caused by mutations in the methyl-CpG binding protein gene (MECP2). MeCP2 is a methyl-cytosine binding protein that is proposed to function as a transcriptional repressor. However, multiple gene expression studies comparing wild-type and MeCP2-deficient neurons hav...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kinde B,Wu DY,Greenberg ME,Gabel HW

更新日期：2016-12-27 00:00:00

abstract：:Throughout time, operational laws and concepts from complex systems have been employed to quantitatively model important aspects and interactions in nature and society. Nevertheless, it remains enigmatic and challenging, yet inspiring, to predict the actual interdependencies that comprise the structure of such systems...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Stavroglou SK,Pantelous AA,Stanley HE,Zuev KM

更新日期：2020-04-07 00:00:00

abstract：:We determined the genomic sequence at the site of insertion in 2,266 unselected P element insertion events. Estimating physical properties of the genomic DNA at these insertion sites-such as base composition, bendability, A-philicity, protein-induced deformability, and B-DNA twist-revealed that they differ significant...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Liao GC,Rehm EJ,Rubin GM

更新日期：2000-03-28 00:00:00

abstract：:Mutations in the thyroid hormone receptor α 1 gene (THRA) have recently been identified as a cause of intellectual deficit in humans. Patients present with structural abnormalities including microencephaly, reduced cerebellar volume and decreased axonal density. Here, we show that directed differentiation of THRA muta...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Krieger TG,Moran CM,Frangini A,Visser WE,Schoenmakers E,Muntoni F,Clark CA,Gadian D,Chong WK,Kuczynski A,Dattani M,Lyons G,Efthymiadou A,Varga-Khadem F,Simons BD,Chatterjee K,Livesey FJ

更新日期：2019-11-05 00:00:00

abstract：:Trust is a critical social process that helps us to cooperate with others and is present to some degree in all human interaction. However, the underlying brain mechanisms of conditional and unconditional trust in social reciprocal exchange are still obscure. Here, we used hyperfunctional magnetic resonance imaging, in...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Krueger F,McCabe K,Moll J,Kriegeskorte N,Zahn R,Strenziok M,Heinecke A,Grafman J

更新日期：2007-12-11 00:00:00