Resolving the evolutionary relationships of molluscs with phylogenomic tools.

Abstract:

:Molluscs (snails, octopuses, clams and their relatives) have a great disparity of body plans and, among the animals, only arthropods surpass them in species number. This diversity has made Mollusca one of the best-studied groups of animals, yet their evolutionary relationships remain poorly resolved. Open questions have important implications for the origin of Mollusca and for morphological evolution within the group. These questions include whether the shell-less, vermiform aplacophoran molluscs diverged before the origin of the shelled molluscs (Conchifera) or lost their shells secondarily. Monoplacophorans were not included in molecular studies until recently, when it was proposed that they constitute a clade named Serialia together with Polyplacophora (chitons), reflecting the serial repetition of body organs in both groups. Attempts to understand the early evolution of molluscs become even more complex when considering the large diversity of Cambrian fossils. These can have multiple dorsal shell plates and sclerites or can be shell-less but with a typical molluscan radula and serially repeated gills. To better resolve the relationships among molluscs, we generated transcriptome data for 15 species that, in combination with existing data, represent for the first time all major molluscan groups. We analysed multiple data sets containing up to 216,402 sites and 1,185 gene regions using multiple models and methods. Our results support the clade Aculifera, containing the three molluscan groups with spicules but without true shells, and they support the monophyly of Conchifera. Monoplacophora is not the sister group to other Conchifera but to Cephalopoda. Strong support is found for a clade that comprises Scaphopoda (tusk shells), Gastropoda and Bivalvia, with most analyses placing Scaphopoda and Gastropoda as sister groups. This well-resolved tree will constitute a framework for further studies of mollusc evolution, development and anatomy.

journal_name

Nature

journal_title

Nature

authors

Smith SA,Wilson NG,Goetz FE,Feehery C,Andrade SC,Rouse GW,Giribet G,Dunn CW

doi

10.1038/nature10526

subject

Has Abstract

pub_date

2011-10-26 00:00:00

pages

364-7

issue

7377

eissn

0028-0836

issn

1476-4687

pii

nature10526

journal_volume

480

pub_type

杂志文章

相关文献

NATURE文献大全
  • Mechanosensitivity of mammalian auditory hair cells in vitro.

    abstract::Intracellular responses recorded in vitro from the cochleas of anaesthetized mammals have shown that the mechanoreceptive inner and outer hair cells are sharply tuned, accounting for many of the properties of the afferent fibres in the auditory nerve. However, in vivo it has not been possible to measure directly the e...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/321517a0

    authors: Russell IJ,Richardson GP,Cody AR

    更新日期:1986-05-29 00:00:00

  • Securin-independent regulation of separase by checkpoint-induced shugoshin-MAD2.

    abstract::Separation of eukaryotic sister chromatids during the cell cycle is timed by the spindle assembly checkpoint (SAC) and ultimately triggered when separase cleaves cohesion-mediating cohesin1-3. Silencing of the SAC during metaphase activates the ubiquitin ligase APC/C (anaphase-promoting complex, also known as the cycl...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/s41586-020-2182-3

    authors: Hellmuth S,Gómez-H L,Pendás AM,Stemmann O

    更新日期:2020-04-01 00:00:00

  • In vitro osteoclast generation from different bone marrow fractions, including a highly enriched haematopoietic stem cell population.

    abstract::It is well established that the osteoclast is formed by fusion of post-mitotic, mononuclear precursors derived from circulating progenitor cells. However, the precise haematopoietic origin of the osteoclast is unknown. We have investigated this here by fractionating mouse bone marrow and isolating haematopoietic stem ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/321079a0

    authors: Scheven BA,Visser JW,Nijweide PJ

    更新日期:1986-05-01 00:00:00

  • The genetics of monarch butterfly migration and warning colouration.

    abstract::The monarch butterfly, Danaus plexippus, is famous for its spectacular annual migration across North America, recent worldwide dispersal, and orange warning colouration. Despite decades of study and broad public interest, we know little about the genetic basis of these hallmark traits. Here we uncover the history of t...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature13812

    authors: Zhan S,Zhang W,Niitepõld K,Hsu J,Haeger JF,Zalucki MP,Altizer S,de Roode JC,Reppert SM,Kronforst MR

    更新日期:2014-10-16 00:00:00

  • Blood flow changes in human somatosensory cortex during anticipated stimulation.

    abstract::Positron emission tomography (PET) measurements of brain blood flow were used to monitor changes in the human primary and secondary somatosensory cortices during the period when somatosensory stimuli were expected. In anticipation of either focal or innocuous touching, or localized, painful shocks, blood flow decrease...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/373249a0

    authors: Drevets WC,Burton H,Videen TO,Snyder AZ,Simpson JR Jr,Raichle ME

    更新日期:1995-01-19 00:00:00

  • The impacts of climate change on water resources and agriculture in China.

    abstract::China is the world's most populous country and a major emitter of greenhouse gases. Consequently, much research has focused on China's influence on climate change but somewhat less has been written about the impact of climate change on China. China experienced explosive economic growth in recent decades, but with only...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature09364

    authors: Piao S,Ciais P,Huang Y,Shen Z,Peng S,Li J,Zhou L,Liu H,Ma Y,Ding Y,Friedlingstein P,Liu C,Tan K,Yu Y,Zhang T,Fang J

    更新日期:2010-09-02 00:00:00

  • Messenger RNA from human brain induces drug- and voltage-operated channels in Xenopus oocytes.

    abstract::Sodium channels and receptors to serotonin and kainate were 'transplanted' from human brain into frog oocytes, by isolating messenger RNA from a fetal brain, and injecting it into Xenopus laevis oocytes. The mRNA was translated by the oocyte and induced the appearance of functional receptors and channels in its membra...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/308421a0

    authors: Gundersen CB,Miledi R,Parker I

    更新日期:1984-03-29 00:00:00

  • Ontogeny of orientation flight in the honeybee revealed by harmonic radar.

    abstract::Cognitive ethology focuses on the study of animals under natural conditions to reveal ecologically adapted modes of learning. But biologists can more easily study what an animal learns than how it learns. For example, honeybees take repeated 'orientation' flights before becoming foragers at about three weeks of age. T...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/35000564

    authors: Capaldi EA,Smith AD,Osborne JL,Fahrbach SE,Farris SM,Reynolds DR,Edwards AS,Martin A,Robinson GE,Poppy GM,Riley JR

    更新日期:2000-02-03 00:00:00

  • An eIF-4A-like protein is a suppressor of an Escherichia coli mutant defective in 50S ribosomal subunit assembly.

    abstract::The assembly of ribosomes in bacterial cells is a complex process that remains poorly characterized. The in vitro assembly of active ribosomal subunits from purified RNA and protein components indicates that all of the information for proper assembly resides in the primary sequences of these macromolecules. On the oth...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/336496a0

    authors: Nishi K,Morel-Deville F,Hershey JW,Leighton T,Schnier J

    更新日期:1988-12-01 00:00:00

  • Recent Arctic warming vertical structure contested.

    abstract::The vertical structure of the recent Arctic warming contains information about the processes governing Arctic climate trends. Graversen et al. argue, on the basis of ERA-40 reanalysis data, that a distinct maximum in 1979-2001 warm-season (April-October) Arctic temperature trends appears around 3 km above ground. Here...

    journal_title:Nature

    pub_type: 评论,杂志文章

    doi:10.1038/nature07257

    authors: Grant AN,Brönnimann S,Haimberger L

    更新日期:2008-09-11 00:00:00

  • Decoding reveals the contents of visual working memory in early visual areas.

    abstract::Visual working memory provides an essential link between perception and higher cognitive functions, allowing for the active maintenance of information about stimuli no longer in view. Research suggests that sustained activity in higher-order prefrontal, parietal, inferotemporal and lateral occipital areas supports vis...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature07832

    authors: Harrison SA,Tong F

    更新日期:2009-04-02 00:00:00

  • Guanine nucleotide-binding and autophosphorylating activities associated with the p21src protein of Harvey murine sarcoma virus.

    abstract::The purified p21src protein of Harvey sarcoma virus shows a guanine nucleotide-binding activity and, in addition, at elevated temperature an autophosphorylating activity at a threonine residue using as phosphoryl donor GTP or dGTP but not ATP or dATP. These biochemical activities are unique among those associated with...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/287686a0

    authors: Shih TY,Papageorge AG,Stokes PE,Weeks MO,Scolnick EM

    更新日期:1980-10-23 00:00:00

  • DNA interrogation by the CRISPR RNA-guided endonuclease Cas9.

    abstract::The clustered regularly interspaced short palindromic repeats (CRISPR)-associated enzyme Cas9 is an RNA-guided endonuclease that uses RNA-DNA base-pairing to target foreign DNA in bacteria. Cas9-guide RNA complexes are also effective genome engineering agents in animals and plants. Here we use single-molecule and bulk...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature13011

    authors: Sternberg SH,Redding S,Jinek M,Greene EC,Doudna JA

    更新日期:2014-03-06 00:00:00

  • Anatase TiO2 single crystals with a large percentage of reactive facets.

    abstract::Owing to their scientific and technological importance, inorganic single crystals with highly reactive surfaces have long been studied. Unfortunately, surfaces with high reactivity usually diminish rapidly during the crystal growth process as a result of the minimization of surface energy. A typical example is titaniu...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature06964

    authors: Yang HG,Sun CH,Qiao SZ,Zou J,Liu G,Smith SC,Cheng HM,Lu GQ

    更新日期:2008-05-29 00:00:00

  • Genome-lamina interactions are established de novo in the early mouse embryo.

    abstract::In mammals, the emergence of totipotency after fertilization involves extensive rearrangements of the spatial positioning of the genome1,2. However, the contribution of spatial genome organization to the regulation of developmental programs is unclear3. Here we generate high-resolution maps of genomic interactions wit...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/s41586-019-1233-0

    authors: Borsos M,Perricone SM,Schauer T,Pontabry J,de Luca KL,de Vries SS,Ruiz-Morales ER,Torres-Padilla ME,Kind J

    更新日期:2019-05-01 00:00:00

  • Mapping human visual cortex with positron emission tomography.

    abstract::Positron-emission tomography (PET) can localize functions of the human brain by imaging regional cerebral blood flow (CBF) during voluntary behaviour. Functional brain mapping with PET, however, has been hindered by PET's poor spatial resolution (typically greater than 1 cm). We have developed an image-analysis strate...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/323806a0

    authors: Fox PT,Mintun MA,Raichle ME,Miezin FM,Allman JM,Van Essen DC

    更新日期:1986-10-30 00:00:00

  • Detection of ozone on Saturn's satellites Rhea and Dione.

    abstract::The satellites Rhea and Dione orbit within the magnetosphere of Saturn, where they are exposed to particle irradiation from trapped ions. A similar situation applies to the galilean moons Europa, Ganymede and Callisto, which reside within Jupiter's radiation belts. All of these satellites have surfaces rich in water i...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/40348

    authors: Noll KS,Roush TL,Cruikshank DP,Johnson RE,Pendleton YJ

    更新日期:1997-07-03 00:00:00

  • Association of folding intermediates of glycoproteins with calnexin during protein maturation.

    abstract::Calnexin, an endoplasmic reticulum transmembrane protein, represents a new type of molecular chaperone that selectively associates in a transient fashion with newly synthesized monomeric glycoproteins in HepG2 cells. Calnexin only recognizes glycoproteins when they are incompletely folded. Dissociation of glycoprotein...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/364771a0

    authors: Ou WJ,Cameron PH,Thomas DY,Bergeron JJ

    更新日期:1993-08-26 00:00:00

  • A test of reciprocal X-Y interactions as a cause of hybrid sterility in Drosophila.

    abstract::Elucidation of the nature of the gene interactions that underly the sterility of interspecific hybrids is important in evolutionary biology. The interactions between the heterospecific X and Y (or Z and W) chromosomes are often used as an explanation for two reasons. First, the fertility of the hybrids of the heteroga...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/358751a0

    authors: Johnson NA,Perez DE,Cabot EL,Hollocher H,Wu CI

    更新日期:1992-08-27 00:00:00

  • Cortical remodelling induced by activity of ventral tegmental dopamine neurons.

    abstract::Representations of sensory stimuli in the cerebral cortex can undergo progressive remodelling according to the behavioural importance of the stimuli. The cortex receives widespread projections from dopamine neurons in the ventral tegmental area (VTA), which are activated by new stimuli or unpredicted rewards, and are ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/35083586

    authors: Bao S,Chan VT,Merzenich MM

    更新日期:2001-07-05 00:00:00

  • Forensics: age written in teeth by nuclear tests.

    abstract::Establishing the age at death of individuals is an important step in their identification and can be done with high precision up to adolescence by analysis of dentition, but it is more difficult in adults. Here we show that the amount of radiocarbon present in tooth enamel as a result of nuclear bomb testing during 19...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/437333a

    authors: Spalding KL,Buchholz BA,Bergman LE,Druid H,Frisén J

    更新日期:2005-09-15 00:00:00

  • Enhanced strength and ductility in a high-entropy alloy via ordered oxygen complexes.

    abstract::Oxygen, one of the most abundant elements on Earth, often forms an undesired interstitial impurity or ceramic phase (such as an oxide particle) in metallic materials. Even when it adds strength, oxygen doping renders metals brittle1-3. Here we show that oxygen can take the form of ordered oxygen complexes, a state in ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/s41586-018-0685-y

    authors: Lei Z,Liu X,Wu Y,Wang H,Jiang S,Wang S,Hui X,Wu Y,Gault B,Kontis P,Raabe D,Gu L,Zhang Q,Chen H,Wang H,Liu J,An K,Zeng Q,Nieh TG,Lu Z

    更新日期:2018-11-01 00:00:00

  • Neptune's capture of its moon Triton in a binary-planet gravitational encounter.

    abstract::Triton is Neptune's principal satellite and is by far the largest retrograde satellite in the Solar System (its mass is approximately 40 per cent greater than that of Pluto). Its inclined and circular orbit lies between a group of small inner prograde satellites and a number of exterior irregular satellites with both ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature04792

    authors: Agnor CB,Hamilton DP

    更新日期:2006-05-11 00:00:00

  • Mapping of the residues responsible for the negative cooperativity of the receptor-binding region of insulin.

    abstract::Insulin binding to its receptor leads to negatively cooperative interactions among the receptor sites. Studies with 29 insulin analogues (animal insulins and proinsulin, insulin-like growth factor and chemically modified insulins) which vary 1,000-fold in their affinity for the receptor and in their biological potency...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/273504a0

    authors: De Meyts P,Van Obberghen E,Roth J

    更新日期:1978-06-15 00:00:00

  • Quantum information and computation

    abstract::In information processing, as in physics, our classical world view provides an incomplete approximation to an underlying quantum reality. Quantum effects like interference and entanglement play no direct role in conventional information processing, but they can--in principle now, but probably eventually in practice--b...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/35005001

    authors: Bennett CH,DiVincenzo DP

    更新日期:2000-03-16 00:00:00

  • Structure of serum response factor core bound to DNA.

    abstract::The human serum response factor is a transcription factor belonging to the MADS domain protein family with members characterized from the plant and animal kingdoms. The X-ray crystal structure of the serum response factor core in a specific-recognition DNA complex shows that the functions of DNA binding, dimerization ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/376490a0

    authors: Pellegrini L,Tan S,Richmond TJ

    更新日期:1995-08-10 00:00:00

  • Sound-induced motility of isolated cochlear outer hair cells is frequency-specific.

    abstract::The inner ear is capable of highly selective frequency discrimination. This is achieved not only by the travelling wave of the basilar membrane in the cochlear partition, but also by the active participation of nonlinear and vulnerable elements that enhance frequency selectivity. It has been shown that isolated mammal...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/342814a0

    authors: Brundin L,Flock A,Canlon B

    更新日期:1989-12-14 00:00:00

  • Sisyphus cooling of electrically trapped polyatomic molecules.

    abstract::Polar molecules have a rich internal structure and long-range dipole-dipole interactions, making them useful for quantum-controlled applications and fundamental investigations. Their potential fully unfolds at ultracold temperatures, where various effects are predicted in many-body physics, quantum information science...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature11595

    authors: Zeppenfeld M,Englert BG,Glöckner R,Prehn A,Mielenz M,Sommer C,van Buuren LD,Motsch M,Rempe G

    更新日期:2012-11-22 00:00:00

  • Developmental genetics of vertebrate glial-cell specification.

    abstract::Oligodendrocytes and astrocytes are macroglial cells of the vertebrate central nervous system. These cells have diverse roles in the maintenance of neurological function. In the embryo, the genetic mechanisms that underlie the specification of macroglial precursors in vivo appear strikingly similar to those that regul...

    journal_title:Nature

    pub_type: 杂志文章,评审

    doi:10.1038/nature09611

    authors: Rowitch DH,Kriegstein AR

    更新日期:2010-11-11 00:00:00

  • Expression of a translocated c-abl gene in hybrids of mouse fibroblasts and chronic myelogenous leukaemia cells.

    abstract::Chronic myelogenous leukaemia (CML) is a clonal disease arising from malignant transformation of pluripotent hematopoietic stem cells. In most cases, it is characterized by the presence of the Philadelphia (Ph1) chromosome (22q-) which results from a reciprocal translocation between chromosomes 9 and 22 (refs 1-3). In...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/319331a0

    authors: Kozbor D,Giallongo A,Sierzega ME,Konopka JB,Witte ON,Showe LC,Croce CM

    更新日期:1986-01-23 00:00:00