AP-site cleavage activity of tyrosyl-DNA phosphodiesterase 1.

Abstract:

:APE-independent base excision repair (BER) pathway plays an important role in the regulation of DNA repair mechanisms. In this study it has been found that recently discovered tyrosyl-DNA phosphodiesterase 1 (Tdp1) catalyzes the AP site cleavage reaction to generate breaks with the 3'- and 5'-phosphate termini. The removal of the 3'-phosphate is performed by polynucleotide kinase phosphatase (PNKP). Tdp1 is known to interact stably with BER proteins: DNA polymerase beta (Pol β), XRCC1, PARP1 and DNA ligase III. The data suggest a role of Tdp1 in the new APE-independent BER pathway in mammals.

journal_name

FEBS Lett

journal_title

FEBS letters

authors

Lebedeva NA,Rechkunova NI,Lavrik OI

doi

10.1016/j.febslet.2011.01.032

subject

Has Abstract

pub_date

2011-02-18 00:00:00

pages

683-6

issue

4

eissn

0014-5793

issn

1873-3468

pii

S0014-5793(11)00062-7

journal_volume

585

pub_type

杂志文章
  • Fraktionierung handelsüblichen insulins. Das verhalten von proinsulin in der ultrazentrifuge.

    abstract::Bovine insulin can be split into several fractions by gel filtration on Sephadex G50. These are, in order of decreasing molecular weight, a new unidentified substance, proinsulin, and a large fraction containing several substances. Ultracentrifugal examination of the proinsulin in acetic acid solution (pH 2.3) gave a ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(68)80122-x

    authors: Zühlke H,Behlke J

    更新日期:1968-12-01 00:00:00

  • Specific inhibition of Na-Ca exchange function by antisense oligodeoxynucleotides.

    abstract::The Na-Ca exchanger is essential for the Ca2+ homeostasis in many cell types. This transporter has been difficult to investigate because no specific inhibitor is available. We have synthesized an antisense oligodeoxynucleotide directed against the rat cardiac Na-Ca exchanger mRNA. To estimate the activity of the Na-Ca...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(95)00391-l

    authors: Lipp P,Schwaller B,Niggli E

    更新日期:1995-05-08 00:00:00

  • T140 analogs as CXCR4 antagonists identified as anti-metastatic agents in the treatment of breast cancer.

    abstract::A chemokine receptor, CXCR4, and its endogenous ligand, stromal cell-derived factor-1 (SDF-1), have been recognized to be involved in the metastasis of several types of cancers. T140 analogs are peptidic CXCR4 antagonists composed of 14 amino acid residues that were previously developed as anti-HIV agents having inhib...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(03)00824-x

    authors: Tamamura H,Hori A,Kanzaki N,Hiramatsu K,Mizumoto M,Nakashima H,Yamamoto N,Otaka A,Fujii N

    更新日期:2003-08-28 00:00:00

  • A protein conformational change associated with the photoreduction of the primary and secondary quinones in the bacterial reaction center.

    abstract::A comparison is made between the PQA----P+QA- and PQAQB----P+QAQB-transitions in Rps. viridis and Rb. sphaeroides reaction centers (RCs) by the use of light-induced Fourier transform infrared (FTIR) difference spectroscopy. In Rb. sphaeroides RCs, we identify a signal at 1650 cm-1 which is present in the P+QA-minus-PQ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(90)81506-j

    authors: Nabedryk E,Bagley KA,Thibodeau DL,Bauscher M,Mäntele W,Breton J

    更新日期:1990-06-18 00:00:00

  • Flow cytometric analysis of intracellular chemokines in chondrocytes in vivo: constitutive expression and enhancement in osteoarthritis and rheumatoid arthritis.

    abstract::Chemokines play a key role in modulating leukocyte functions at sites of inflammation. To assess chondrocyte contribution to the chemotactic environment of inflamed joints the intracellular content of CC and CXC chemokines was investigated. IL-8, GROalpha, MCP-1, RANTES, MIP-1alpha and MIP-1beta expression was evaluat...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(99)00886-8

    authors: Borzi RM,Mazzetti I,Macor S,Silvestri T,Bassi A,Cattini L,Facchini A

    更新日期:1999-07-23 00:00:00

  • Effect of green and black tea supplementation on lipids, lipid oxidation and fibrinogen in the hamster: mechanisms for the epidemiological benefits of tea drinking.

    abstract::There is considerable epidemiological evidence that tea drinking lowers the risk of heart disease. However, the mechanism by which tea can be protective is unknown. Hamsters were fed a normal or high cholesterol diet for 2 weeks and drank green or black tea ad libitum. The plasma lipid profile was significantly improv...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(98)00880-1

    authors: Vinson JA,Dabbagh YA

    更新日期:1998-08-14 00:00:00

  • Mobilization of arachidonic acid between diacyl and ether phospholipids in rabbit alveolar macrophages.

    abstract::The metabolism of 20:4 (arachidonic acid) in alkenylacyl, alkylacyl and diacyl lipid classes in choline glycerophospholipids (CGP) and ethanolamine glycerophospholipids (EGP) in rabbit alveolar macrophages was examined. [3H]20:4 was very rapidly incorporated into diacyl glycerophosphocholine (GPC). After the removal o...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(84)80184-2

    authors: Sugiura T,Katayama O,Fukui J,Nakagawa Y,Waku K

    更新日期:1984-01-09 00:00:00

  • Ultraweak photoemission from dark-adapted leaves and isolated chloroplasts.

    abstract::Dark-adapted isolated spinach chloroplasts and leaves, unlike sub-chloroplast fractions, are capable of emitting ultraweak light spontaneously (50-125 counts/s per cm2). The emission of leaves is due to two processes with activation energies of 97 and 25 kJ/mol while in isolated chloroplasts, it is the result of a sin...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(90)81454-v

    authors: Hideg E,Kobayashi M,Inaba H

    更新日期:1990-11-26 00:00:00

  • Modulation by phosphorylation of glycogen phosphorylase-sarcoplasmic reticulum interaction.

    abstract::Glycogen phosphorylase b at concentrations close to those found in skeletal muscle interacts with sarcoplasmic reticulum membranes, but not with liposomes made of lipids extracted from these membranes, and is inhibited upon binding to the membrane. The interaction of glycogen phosphorylase with the sarcoplasmic reticu...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(91)80606-4

    authors: Cuenda A,Centeno F,Gutierrez-Merino C

    更新日期:1991-06-03 00:00:00

  • Electrogenic reduction of the primary electron donor P700 by plastocyanin in photosystem I complexes.

    abstract::An electrometric technique was used to investigate electron transfer between spinach plastocyanin (Pc) and photooxidized primary electron donor P700 in photosystem I (PS I) complexes from the cyanobacterium Synechocystis sp. PCC 6803. In the presence of Pc, the fast unresolvable kinetic phase of membrane potential gen...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(01)02615-1

    authors: Mamedov MD,Mamedova AA,Chamorovsky SK,Semenov AY

    更新日期:2001-07-06 00:00:00

  • A cdc2-related kinase PSSALRE/cdk5 is homologous with the 30 kDa subunit of tau protein kinase II, a proline-directed protein kinase associated with microtubule.

    abstract::We previously reported that tau protein kinase II (TPKII) from bovine brain was composed of 30 kDa and 23 kDa subunits. The 30 kDa subunit of TPKII can be regarded as a catalytic subunit because of its ATP-binding activity. Antibodies directed against TPKII-phosphorylated tau also reacted with tau phosphorylated by cd...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(93)80723-8

    authors: Kobayashi S,Ishiguro K,Omori A,Takamatsu M,Arioka M,Imahori K,Uchida T

    更新日期:1993-12-06 00:00:00

  • Movement of the 3'-end of 16 S RNA towards S21 during activation of 30 S ribosomal subunits.

    abstract::Fluorescence techniques were used to study conformational changes that occur in inactive E. coli 30 S ribosomal subunits during activation by heating in 12 mM Mg2+. Activation is associated with movement of a fluorophore on the 3'-end of 16 S RNA into a less polar environment and towards a probe on the cysteine thiol ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(84)81037-6

    authors: Odom OW,Stöffler G,Hardesty B

    更新日期:1984-07-23 00:00:00

  • Structure of translation initiation factor 1 from Mycobacterium tuberculosis and inferred binding to the 30S ribosomal subunit.

    abstract::The crystal structure of the free form of IF1 from Mycobacterium tuberculosis has been determined at 1.47 A resolution. The structure adopts the expected OB fold and matches the high structural conservation among IF1 orthologues. In order to further explore the function of Mtb-IF1, we built a model of its interaction ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2010.01.051

    authors: Hatzopoulos GN,Mueller-Dieckmann J

    更新日期:2010-03-05 00:00:00

  • Brefeldin A inhibits protein synthesis in cultured cells.

    abstract::The fungal metabolite brefeldin A (BFA) is known to disrupt the Golgi apparatus resulting in redistribution of Golgi proteins to the endoplasmic reticulum and inhibition of protein secretion. BFA was found to inhibit protein synthesis in rat glioma C6 cells by up to 70% between 0.1 and 1 microgram/ml. Inhibition was b...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(92)81508-j

    authors: Fishman PH,Curran PK

    更新日期:1992-12-21 00:00:00

  • 15-Deoxy-delta12,14-PGJ2, but not troglitazone, modulates IL-1beta effects in human chondrocytes by inhibiting NF-kappaB and AP-1 activation pathways.

    abstract::The activation of peroxisome proliferator-activated receptor gamma (PPARgamma) has been shown to inhibit the production and the effects of proinflammatory cytokines. Since interleukin-1beta (IL-1beta) directly mediates cartilage degradation in osteoarthritis, we investigated the capability of PPARgamma ligands to modu...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(01)02614-x

    authors: Boyault S,Simonin MA,Bianchi A,Compe E,Liagre B,Mainard D,Bécuwe P,Dauça M,Netter P,Terlain B,Bordji K

    更新日期:2001-07-13 00:00:00

  • Structural identification of the lipopolysaccharide-binding capability of a cupin-family protein from Helicobacter pylori.

    abstract::We solved the crystal structure of a functionally uncharacterized protein, HP0902, from Helicobacter pylori. Its structure demonstrated an all-β cupin fold that cannot bind metal ions due to the absence of a metal-binding histidine that is conserved in many metallo-cupins. In contrast, isothermal titration calorimetry...

    journal_title:FEBS letters

    pub_type: 信件

    doi:10.1002/1873-3468.12332

    authors: Sim DW,Kim JH,Kim HY,Jang JH,Lee WC,Kim EH,Park PJ,Lee KH,Won HS

    更新日期:2016-09-01 00:00:00

  • Direct reprogramming of terminally differentiated B cells into erythroid lineage.

    abstract::Hematopoietic progenitors have been shown to retain plasticity and switch lineages by appropriate stimuli. However, mature blood cells hardly showed such differentiation plasticity. In this paper, we tried to reprogram mature B cells into erythroid lineage by expressing various hematopoietic transcription factors. Amo...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2012.08.019

    authors: Sadahira K,Fukuchi Y,Kunimono H,Sakurai M,Ikeda Y,Okamoto S,Nakajima H

    更新日期:2012-10-19 00:00:00

  • Calcium-dependent binding of uteroglobin (PCB-BP/CCSP) to negatively charged phospholipid liposomes.

    abstract::To investigate interactions between the polychlorinated biphenyl-binding protein uteroglobin and phospholipids, we used a liposome-pelletting assay. PCB-BP/uteroglobin bound to liposomes made from negatively charged phospholipids (PtdSer and PtdIns) in the presence of 5 mM calcium. No binding to liposomes made from ph...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(95)01159-c

    authors: Nord M,Gustafsson JA,Lund J

    更新日期:1995-11-06 00:00:00

  • Differential gene expression of mammalian SPO11/TOP6A homologs during meiosis.

    abstract::As the initiator of DNA double-strand breaks during meiosis in Saccharomyces cerevisiae, the SPO11 protein is essential for recombination. Similarity between SPO11 and archaebacterial TOP6A proteins points to evolutionary specialization of a DNA cleavage function for meiotic recombination. To determine whether this ex...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(99)01546-x

    authors: Shannon M,Richardson L,Christian A,Handel MA,Thelen MP

    更新日期:1999-12-03 00:00:00

  • Discovery of the catalytic function of a putative 2-oxoacid dehydrogenase multienzyme complex in the thermophilic archaeon Thermoplasma acidophilum.

    abstract::Those aerobic archaea whose genomes have been sequenced possess a single 4-gene operon that, by sequence comparisons with Bacteria and Eukarya, appears to encode the three component enzymes of a 2-oxoacid dehydrogenase multienzyme complex. However, no catalytic activity of any such complex has ever been detected in th...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2004.10.058

    authors: Heath C,Jeffries AC,Hough DW,Danson MJ

    更新日期:2004-11-19 00:00:00

  • TP63 and TP73 in cancer, an unresolved "family" puzzle of complexity, redundancy and hierarchy.

    abstract::TP53 belongs to a small gene family that includes, in mammals, two additional paralogs, TP63 and TP73. The p63 and p73 proteins are structurally and functionally similar to p53 and their activity as transcription factors is regulated by a wide repertoire of shared and unique post-translational modifications and intera...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2014.06.047

    authors: Costanzo A,Pediconi N,Narcisi A,Guerrieri F,Belloni L,Fausti F,Botti E,Levrero M

    更新日期:2014-08-19 00:00:00

  • Vav, a GDP/GTP nucleotide exchange factor, interacts with GDIs, proteins that inhibit GDP/GTP dissociation.

    abstract::Vav functions as a specific GDP/GTP nucleotide exchange factor which is regulated by tyrosine phosphorylation in the hematopoietic system. Loss of the amino-terminus sequences of Vav was sufficient to control its transforming potential and its function in T cells. We report here the identification of the hematopoietic...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(00)01121-2

    authors: Groysman M,Russek CS,Katzav S

    更新日期:2000-02-04 00:00:00

  • Characterization of a general amino acid permease from Hebeloma cylindrosporum.

    abstract::Besides a role in phosphate supply, ectomycorrhizas play a crucial role in nitrogen nutrition of plants. The ectomycorrhizal association between Hebeloma cylindrosporum and Pinus pinaster serves as a model system accessible to molecular manipulation. Hebeloma mycelium is able to take up and use amino acids as the sole...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(02)03271-4

    authors: Wipf D,Benjdia M,Tegeder M,Frommer WB

    更新日期:2002-09-25 00:00:00

  • Adrenergic regulation of ureogenesis in hepatocytes from adrenalectomized rats. Possible involvement of two pathways of signal transduction in alpha 1-adrenergic action.

    abstract::In hepatocytes from control rats, the ureogenic action of epinephrine is mainly mediated through alpha 1-adrenoceptors and the effect is independent of the presence of extracellular calcium. In hepatocytes from adrenalectomized rats, both alpha 1- and beta-adrenoceptors are involved in the action of epinephrine. Furth...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(84)80118-0

    authors: Hernández-Sotomayor SM,García-Sáinz JA

    更新日期:1984-01-30 00:00:00

  • Purification of Escherichia coli 50 S ribosomal proteins by high performance liquid chromatography.

    abstract::The 50 S subunit proteins from the Escherichia coli ribosome were purified by size-exclusion, ion-exchange or reversed phase high performance liquid chromatography (HPLC) avoiding any precipitation or desalting procedures during isolation. Best resolution of this complex protein mixture was achieved by reversed phase ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(84)80832-7

    authors: Kamp RM,Wittmann-Liebold B

    更新日期:1984-02-13 00:00:00

  • p21ras contributes to HIV-1 activation in T-cells.

    abstract::Activation of T-cells infected by HIV-1 results in activation of long terminal repeat (LTR)-dependent viral transcription and ultimately the production of infectious virus. Although full T-cell activation requires a complex series of intracellular signals, including protein kinase C activation, calcium mobilisation, a...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(92)80633-r

    authors: Baldari CT,Macchia G,Massone A,Telford JL

    更新日期:1992-06-15 00:00:00

  • Differential display analysis of mutants for the transcription factor Pdr1p regulating multidrug resistance in the budding yeast.

    abstract::The transcription factor Pdr1p recognizes Pdr1p/Pdr3p-response element (PDRE) to activate genes involved in multidrug resistance of the budding yeast. To identify novel targets of Pdr1p, we compared transcriptomes among the yeast cells bearing wild, disrupted and gain-of-function alleles of PDR1 using a high-throughpu...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(01)02792-2

    authors: Miura F,Yada T,Nakai K,Sakaki Y,Ito T

    更新日期:2001-09-07 00:00:00

  • Laminin alpha1 chain mediated reduction of laminin alpha2 chain deficient muscular dystrophy involves integrin alpha7beta1 and dystroglycan.

    abstract::Transgenically introduced laminin (LN) alpha1 chain prevents muscular dystrophy in LNalpha2 chain deficient mice. We now report increased integrin alpha7Bbeta1D synthesis in dystrophic LNalpha2 chain deficient muscle. Yet, immunofluorescence demonstrated a reduced expression of integrin alpha7B subunit at the sarcolem...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2006.02.027

    authors: Gawlik KI,Mayer U,Blomberg K,Sonnenberg A,Ekblom P,Durbeej M

    更新日期:2006-03-20 00:00:00

  • Further enhancement of baculovirus insecticidal efficacy with scorpion toxins that interact cooperatively.

    abstract::We have studied whether the cooperative insecticidal effect of certain scorpion toxin pairs, namely either a combination of excitatory and depressant, or alpha and depressant scorpion toxins, would improve the efficacy of Autographa californica nucleopolyhedrovirus (AcMNPV) over a virus expressing only a single toxin,...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(03)00104-2

    authors: Regev A,Rivkin H,Inceoglu B,Gershburg E,Hammock BD,Gurevitz M,Chejanovsky N

    更新日期:2003-02-27 00:00:00

  • Cyclic mononucleotides modulate potassium and calcium flux responses to H2O2 in Arabidopsis roots.

    abstract::Cyclic mononucleotides are messengers in plant stress responses. Here we show that hydrogen peroxide (H2O2) induces rapid net K(+)-efflux and Ca(2+)-influx in Arabidopsis roots. Pre-treatment with either 10μM cAMP or cGMP for 1 or 24h does significantly reduce net K(+)-leakage and Ca(2+)-influx, and in the case of the...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2014.01.062

    authors: Ordoñez NM,Marondedze C,Thomas L,Pasqualini S,Shabala L,Shabala S,Gehring C

    更新日期:2014-03-18 00:00:00