Late Miocene diversification and phylogenetic relationships of the huge toads in the Rhinella marina (Linnaeus, 1758) species group (Anura: Bufonidae).

Abstract:

:We investigated the phylogeny and biogeography of the Rhinella marina group, using molecular, morphological, and skin-secretion data, contributing to an understanding of Neotropical faunal diversification. The maximum-parsimony and Bayesian analyzes of the combined data recovered a monophyletic R. marina group. Molecular dating based on Bayesian inferences and fossil calibration placed the earliest phylogenetic split within the R. marina group at ∼ 10.47 MYA, in the late Miocene. Two rapid major diversifications occurred from Central Brazil, first northward (∼ 8.08 MYA) in late Miocene and later southward (∼ 5.17 MYA) in early Pliocene. These results suggest that barriers and dispersal routes created by the uplift of Brazilian Central Shield and climatic changes explain the diversification and current species distributions of the R. marina group. Dispersal-vicariance analyzes (DIVA) indicated that the two major diversifications of the R. marina group were due to vicariance, although eleven dispersals subsequently occurred.

journal_name

Mol Phylogenet Evol

authors

Maciel NM,Collevatti RG,Colli GR,Schwartz EF

doi

10.1016/j.ympev.2010.08.025

subject

Has Abstract

pub_date

2010-11-01 00:00:00

pages

787-97

issue

2

eissn

1055-7903

issn

1095-9513

pii

S1055-7903(10)00359-3

journal_volume

57

pub_type

杂志文章
  • Higher-level phylogeny of trogoniformes.

    abstract::Phylogenetic relationships between Trogoniformes and several other putative closely related groups of birds, based on complete cytochrome b and nearly complete 12S ribosomal RNA sequences, were studied. The taxa included trogons, owls, cuckoos, parrots, nightjars, hummingbirds, kingfishers, motmots, rollers, mousebird...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1006/mpev.1999.0683

    authors: Espinosa de los Monteros A

    更新日期:2000-01-01 00:00:00

  • Multilocus phylogeny and phylogenomics of Eriochrysis P. Beauv. (Poaceae-Andropogoneae): Taxonomic implications and evidence of interspecific hybridization.

    abstract::Species delimitation is a vital issue concerning evolutionary biology and conservation of biodiversity. However, it is a challenging task for several reasons, including the low interspecies variability of markers currently used in phylogenetic reconstructions and the occurrence of reticulate evolution and polyploidy i...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2016.02.022

    authors: Welker CAD,Souza-Chies TT,Longhi-Wagner HM,Peichoto MC,McKain MR,Kellogg EA

    更新日期:2016-06-01 00:00:00

  • Analysis of the distribution of bootstrap tree lengths using the maximum parsimony method.

    abstract::The bootstrap is an important tool for estimating the confidence interval of monophyletic groups within phylogenies. Although bootstrap analyses are used in most evolutionary studies, there is no clear consensus as how best to interpret bootstrap probability values. To study further the bootstrap method, nine small su...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1006/mpev.1996.0084

    authors: Bhattacharya D

    更新日期:1996-12-01 00:00:00

  • A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families.

    abstract::The Lecanoromycetes is the largest class of lichenized Fungi, and one of the most species-rich classes in the kingdom. Here we provide a multigene phylogenetic synthesis (using three ribosomal RNA-coding and two protein-coding genes) of the Lecanoromycetes based on 642 newly generated and 3329 publicly available seque...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2014.04.003

    authors: Miadlikowska J,Kauff F,Högnabba F,Oliver JC,Molnár K,Fraker E,Gaya E,Hafellner J,Hofstetter V,Gueidan C,Otálora MA,Hodkinson B,Kukwa M,Lücking R,Björk C,Sipman HJ,Burgaz AR,Thell A,Passo A,Myllys L,Goward T,Fern

    更新日期:2014-10-01 00:00:00

  • Distinct Bradyrhizobium [corrected] communities nodulate legumes native to temperate and tropical monsoon Australia.

    abstract::Geographic isolation and growing climate aridity played major roles in the evolution of Australian legumes. It is likely that these two factors also impacted on the evolution of their root-nodule bacteria. To investigate this issue, we applied a multilocus sequence analysis (MLSA) approach to examine Bradyrhizobium is...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2011.12.020

    authors: Stępkowski T,Watkin E,McInnes A,Gurda D,Gracz J,Steenkamp ET

    更新日期:2012-05-01 00:00:00

  • Molecular phylogeny and biogeography of the weevil subfamily Platypodinae reveals evolutionarily conserved range patterns.

    abstract::Platypodinae is a peculiar weevil subfamily of species that cultivate fungi in tunnels excavated in dead wood. Their geographical distribution is generally restricted, with genera confined to a single continent or large island, which provides a useful system for biogeographical research. This study establishes the fir...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2015.05.028

    authors: Jordal BH

    更新日期:2015-11-01 00:00:00

  • Surviving the Messinian Salinity Crisis? Divergence patterns in the genus Dendropoma (Gastropoda: Vermetidae) in the Mediterranean Sea.

    abstract::Four genetically distinct clades were recently described under the name Dendropoma petraeum, a Mediterranean endemic vermetid gastropod. The aim of this work is to date the processes that drove to the diversification within this taxon and to relate them to the corresponding historical events occurred in the Mediterran...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2015.05.004

    authors: Calvo M,Alda F,Oliverio M,Templado J,Machordom A

    更新日期:2015-10-01 00:00:00

  • Biogeography and speciation of a direct developing frog from the coastal arid zone of Western Australia.

    abstract::Within the southwestern Australian biodiversity hotspot, the Shark Bay region displays high levels of plant and animal endemism, particularly in the herpetofauna. The region has been subjected to dramatic climatic fluctuations and has been geologically active from the Late Miocene to the present. The myobatrachid frog...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2007.05.023

    authors: Edwards DL

    更新日期:2007-11-01 00:00:00

  • Cryptic species and host specificity in the bryozoan-associated hydrozoan Zanclea divergens (Hydrozoa, Zancleidae).

    abstract::Zanclea divergens is a tropical hydrozoan living in symbiotic association with bryozoans and currently reported from Papua New Guinea, Indonesia, and Maldives. Here, we used an integrative approach to assess the morpho-molecular diversity of the species across the Indo-Pacific. Phylogenetic and species delimitation an...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2020.106893

    authors: Maggioni D,Schiavo A,Ostrovsky AN,Seveso D,Galli P,Arrigoni R,Berumen ML,Benzoni F,Montano S

    更新日期:2020-10-01 00:00:00

  • Biogeography of land snail genus Acusta (Gastropoda: Camaenidae): Diversification on East Asian islands.

    abstract::East Asia has highly diverse and endemic biota due to its complex geological and climatic history and its diversified topography. The continental and insular distributions of land snail genus Acusta in East Asia provide a good opportunity to compare the evolutionary processes in this group under different biogeographi...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2020.106999

    authors: Hwang CC,Zhou WC,Ger MJ,Guo Y,Qian ZX,Wang YC,Tsai CL,Wu SP

    更新日期:2021-02-01 00:00:00

  • Molecular phylogeny and biogeography of the spider ants, genus Leptomyrmex Mayr (Hymenoptera: Formicidae).

    abstract::This study provides the first phylogenetic reconstruction of the ant genus Leptomyrmex Mayr, a prominent endemic component of rain forest and wet sclerophyll forest in Australia, New Guinea and New Caledonia. Five genes are used to reconstruct phylogeny and estimate of ages of diversification in order to test congruen...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2011.03.004

    authors: Lucky A

    更新日期:2011-05-01 00:00:00

  • South Asia supports a major endemic radiation of Hemidactylus geckos.

    abstract::Hemidactylus geckos are a species-rich component of many tropical lizard assemblages. We sampled deeply among tropical Asian, and especially South Asian, taxa and used a multi-gene approach to establish the affinities of Indian and Sri Lankan Hemidactylus and to evaluate the monophyly of previously proposed taxa withi...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2010.06.014

    authors: Bauer AM,Jackman TR,Greenbaum E,Giri VB,de Silva A

    更新日期:2010-10-01 00:00:00

  • Phylogeography of surface and cave Astyanax (Teleostei) from Central and North America based on cytochrome b sequence data.

    abstract::Astyanax fasciatus has become a model organism for the study of regressive and adaptive evolution in cave animals. To fully understand these processes, it is important to have background information on the systematics and phylogeography of surface and cave populations of this species. Here we investigate the phylogeog...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2004.07.001

    authors: Strecker U,Faúndez VH,Wilkens H

    更新日期:2004-11-01 00:00:00

  • Detection of homologous recombination among bacteriophage P2 relatives.

    abstract::Sequencing of five late genes from 18 isolates of P2-like bacteriophages showed that these are at least 96% identical to the genes of phage P2. A maximum-parsimony phylogenetic analysis of these genes showed excess homoplasy of a magnitude three to six times higher than that expected. Examination of the distribution o...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1006/mpev.2001.1020

    authors: Nilsson AS,Haggård-Ljungquist E

    更新日期:2001-11-01 00:00:00

  • Phylogeography of a morphologically diverse Neotropical montane species, the Common Bush-Tanager (Chlorospingus ophthalmicus).

    abstract::The Common Bush-Tanager (Chlorospingus ophthalmicus) is distributed in Neotropical cloud-forests from Mexico to Argentina and contains 25 subspecies divided into eight subspecies groups based on biogeography, eye coloration, presence of a postocular spot and chest band. All of Central America is occupied by a single s...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2008.02.004

    authors: Weir JT,Bermingham E,Miller MJ,Klicka J,González MA

    更新日期:2008-05-01 00:00:00

  • Cryptic speciation and limited hybridization within Lumbricus earthworms (Clitellata: Lumbricidae).

    abstract::Cryptic mitochondrial (mt) lineages are known to exist in the earthworm morphospecies Lumbricus rubellus and L. terrestris. The latter was recently split into two species, L. terrestris and L. herculeus, based on large genetic distances and a statistical difference in body size. There is support for the separation of ...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2016.09.011

    authors: Martinsson S,Erséus C

    更新日期:2017-01-01 00:00:00

  • Total evidence, consensus, and bat phylogeny: A distance-based approach.

    abstract::Resolution of the total evidence (i.e., character congruence) versus consensus (i.e., taxonomic congruence) debate has been impeded by (1) a failure to employ validation methods consistently across both tree-building and consensus analyses, (2) the incomparability of methods for constructing as opposed to those for co...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1006/mpev.1998.0561

    authors: Lapointe FJ,Kirsch JA,Hutcheon JM

    更新日期:1999-02-01 00:00:00

  • Complete sequence of the mitochondrial DNA in the sea urchin Arbacia lixula: conserved features of the echinoid mitochondrial genome.

    abstract::The complete nucleotide sequence (15,719 nucleotides) of the mitochondrial DNA (mtDNA) from the sea urchin Arbacia lixula is presented. The comparison of gene arrangement between different echinoderm orders of the same class provides evidence that the gene organization is conserved within the same echinoderm class. Th...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1006/mpev.1996.0027

    authors: De Giorgi C,Martiradonna A,Lanave C,Saccone C

    更新日期:1996-04-01 00:00:00

  • Insights into Himalayan biogeography from geckos: a molecular phylogeny of Cyrtodactylus (Squamata: Gekkonidae).

    abstract::The India-Asia collision profoundly influenced the climate, topography and biodiversity of Asia, causing the formation of the biodiverse Himalayas. The species-rich gekkonid genus Cyrtodactylus is an ideal clade for exploring the biological impacts of the India-Asia collision, as previous phylogenetic hypotheses sugge...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2014.07.018

    authors: Agarwal I,Bauer AM,Jackman TR,Karanth KP

    更新日期:2014-11-01 00:00:00

  • Historical biogeography and speciation in the reef fish genus Haemulon (Teleostei: Haemulidae).

    abstract::The high biodiversity of tropical marine hotspots has long intrigued evolutionary biologists and biogeographers. The genus Haemulon (grunts) is one of the most important (numerically, ecologically, and economically) reef fish groups in the New World and an excellent candidate to test hypotheses of speciation and diver...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2008.05.024

    authors: Rocha LA,Lindeman KC,Rocha CR,Lessios HA

    更新日期:2008-09-01 00:00:00

  • Molecular phylogenetics of Oestroidea (Diptera: Calyptratae) with emphasis on Calliphoridae: insights into the inter-familial relationships and additional evidence for paraphyly among blowflies.

    abstract::The superfamily Oestroidea, comprising ∼15,000 species, is a large and ecologically diverse clade within the order Diptera. Among its six commonly recognized families, Calliphoridae seems to be crucial for understanding evolutionary relationships in the group, as it is recognized as a controversial paraphyletic groupi...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2012.08.007

    authors: Marinho MA,Junqueira AC,Paulo DF,Esposito MC,Villet MH,Azeredo-Espin AM

    更新日期:2012-12-01 00:00:00

  • Reappraisal of the "Molecular phylogeny of Western Palaearctic Helicidae s.l. (Gastropoda: Stylommatophora)": when poor science meets GenBank.

    abstract::A paper on the 'Molecular phylogeny of Western Palaearctic Helicidae s.l.', published by Steinke et al. (2004) in this journal, is critically analysed. Several obvious errors are corrected and methodological weaknesses are revealed. BLAST searches on the sequences published in that paper and now in GenBank, showed hig...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2011.08.024

    authors: Groenenberg DS,Neubert E,Gittenberger E

    更新日期:2011-12-01 00:00:00

  • Was the exposed continental shelf a long-distance colonization route in the ice age? The Southeast Asia origin of Hainan and Taiwan partridges.

    abstract::Research on island biotas has greatly contributed to the development of modern evolutionary and biogeographic theories. Until now, most studies have suggested that continental islands received their biotas directly from the adjacent mainland. However, only a few studies have indicated that species on continental islan...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2014.11.006

    authors: Chen D,Chang J,Li SH,Liu Y,Liang W,Zhou F,Yao CT,Zhang Z

    更新日期:2015-02-01 00:00:00

  • AFLP and breeding system studies indicate vicariance origin for scattered populations and enigmatic low fecundity in the Moroccan endemic Hypochaeris angustifolia (Asteraceae), sister taxon to all of the South American Hypochaeris species.

    abstract::We used Amplified Fragment Length Polymorphism markers (AFLP) and breeding system studies to investigate the population structure and reproductive biology of Hypochaeris angustifolia (Asteraceae: Cichorieae). This species is endemic to altiplanos of the Atlas Mountains (Morocco) where it occurs in scattered population...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2009.06.008

    authors: Terrab A,Ortiz MA,Talavera M,Ariza MJ,Moriana Mdel C,García-Castaño JL,Tremetsberger K,Stuessy TF,Baeza CM,Urtubey E,Ruas Cde F,Casimiro-Soriguer R,Balao F,Gibbs PE,Talavera S

    更新日期:2009-10-01 00:00:00

  • Phylogeny of Cephalobina (Nematoda): molecular evidence for recurrent evolution of probolae and incongruence with traditional classifications.

    abstract::Nematodes of the suborder Cephalobina include an ecologically and morphologically diverse array of species that range from soil-dwelling microbivores to parasites of vertebrates and invertebrates. Despite a long history of study, certain of these microbivores (Cephaloboidea) present some of the most intractable proble...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2006.04.005

    authors: Nadler SA,De Ley P,Mundo-Ocampo M,Smythe AB,Patricia Stock S,Bumbarger D,Adams BJ,De Ley IT,Holovachov O,Baldwin JG

    更新日期:2006-09-01 00:00:00

  • A phylogenetic blueprint for a modern whale.

    abstract::The emergence of Cetacea in the Paleogene represents one of the most profound macroevolutionary transitions within Mammalia. The move from a terrestrial habitat to a committed aquatic lifestyle engendered wholesale changes in anatomy, physiology, and behavior. The results of this remarkable transformation are extant w...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2012.10.012

    authors: Gatesy J,Geisler JH,Chang J,Buell C,Berta A,Meredith RW,Springer MS,McGowen MR

    更新日期:2013-02-01 00:00:00

  • Phylogenetic analysis of Blattabacterium, endosymbiotic bacteria from the wood roach, Cryptocercus (Blattodea: Cryptocercidae), including a description of three new species.

    abstract::Members of the cockroach genus Cryptocercus are wood-feeding, subsocial insects that live in temperate forests of the Nearctic and Palaearctic. At present, nine species are recognized: Cryptocercus relictus and Cryptocercus kyebangensis in eastern Asia and Russia, Cryptocercus primarius and Cryptocercus matilei in sou...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/s1055-7903(02)00330-5

    authors: Clark JW,Kambhampati S

    更新日期:2003-01-01 00:00:00

  • Evolutionary history and biogeographic affinities of the serranochromine cichlids in Zambian rivers.

    abstract::Zambian rivers belong to two major drainages: the Luapula-Congo and the Zambezi River system. Tectonic activity repeatedly altered drainage systems in Africa, so that current fish faunas can only be understood in the context of historic drainage capture events. We use phylogenetic relationships of one widespread linea...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2007.02.011

    authors: Katongo C,Koblmüller S,Duftner N,Mumba L,Sturmbauer C

    更新日期:2007-10-01 00:00:00

  • Analyzing the functional divergence of Slo1 and Slo3 channel subfamilies.

    abstract::Slo1 and Slo3 encode close paralogues of the Slo potassium (K+) channels family. Despite their evolutionary relatedness, Slo1 and Slo3 channels show marked functional differences and evolutionary dynamics. Whereas Slo1 is a highly conserved and widely expressed channel, Slo3 is a rapidly evolving channel restricted to...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2018.12.026

    authors: Vicens A,Vinuesa P,Arenas M,Treviño CL

    更新日期:2019-04-01 00:00:00

  • Pinpointing cryptic borders: Fine-scale phylogeography and genetic landscape analysis of the Hormogaster elisae complex (Oligochaeta, Hormogastridae).

    abstract::Spatial and temporal aspects of the evolution of cryptic species complexes have received less attention than species delimitation within them. The phylogeography of the cryptic complex Hormogaster elisae (Oligochaeta, Hormogastridae) lacks knowledge on several aspects, including the small-scale distribution of its lin...

    journal_title:Molecular phylogenetics and evolution

    pub_type: 杂志文章

    doi:10.1016/j.ympev.2017.05.005

    authors: Marchán DF,Fernández R,de Sosa I,Díaz Cosín DJ,Novo M

    更新日期:2017-07-01 00:00:00