A novel recursive Fourier transform for nonuniform sampled signals: application to heart rate variability spectrum estimation.

Abstract:

:We present a novel method to iteratively calculate discrete Fourier transforms for discrete time signals with sample time intervals that may be widely nonuniform. The proposed recursive Fourier transform (RFT) does not require interpolation of the samples to uniform time intervals, and each iterative transform update of N frequencies has computational order N. Because of the inherent non-uniformity in the time between successive heart beats, an application particularly well suited for this transform is power spectral density (PSD) estimation for heart rate variability. We compare RFT based spectrum estimation with Lomb-Scargle Transform (LST) based estimation. PSD estimation based on the LST also does not require uniform time samples, but the LST has a computational order greater than Nlog(N). We conducted an assessment study involving the analysis of quasi-stationary signals with various levels of randomly missing heart beats. Our results indicate that the RFT leads to comparable estimation performance to the LST with significantly less computational overhead and complexity for applications requiring iterative spectrum estimations.

journal_name

Med Biol Eng Comput

authors

Holland A,Aboy M

doi

10.1007/s11517-009-0461-0

subject

Has Abstract

pub_date

2009-07-01 00:00:00

pages

697-707

issue

7

eissn

0140-0118

issn

1741-0444

journal_volume

47

pub_type

杂志文章
  • Fluctuation analysis of respiratory impedance waveform in asthmatic patients: effect of airway obstruction.

    abstract::Fluctuation analysis has great potential to contribute to pulmonary clinical science and practice. We evaluated the relationship between asthma and the respiratory impedance recurrence period density entropy (RPDEnZrs) and the variability (SDZrs). A non-invasive and simple protocol for assessing respiratory mechanics ...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-012-0957-x

    authors: Veiga J,Lopes AJ,Jansen JM,Melo PL

    更新日期:2012-12-01 00:00:00

  • Cardiac anisotropy in boundary-element models for the electrocardiogram.

    abstract::The boundary-element method (BEM) is widely used for electrocardiogram (ECG) simulation. Its major disadvantage is its perceived inability to deal with the anisotropic electric conductivity of the myocardial interstitium, which led researchers to represent only intracellular anisotropy or neglect anisotropy altogether...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-009-0472-x

    authors: Potse M,Dubé B,Vinet A

    更新日期:2009-07-01 00:00:00

  • The effects of femoral neck cut, cable tension, and muscles forces on the greater trochanter fixation.

    abstract::Greater trochanter (GT) stabilization techniques following a fracture or an osteotomy are still showing high levels of postoperative complications. Understanding the effect of femoral neck cut placement, cable tension and muscles forces on GT fragment displacements could help surgeons optimize their techniques. A 3D f...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-012-0892-x

    authors: Petit Y,Cloutier LP,Duke K,Laflamme GY

    更新日期:2012-04-01 00:00:00

  • New method using multi-regression analysis on evoked electromyography during movement to adjust stimulation conditions.

    abstract::A new method of stimulation of the lower extremities was devised that automatically adjusts the stimulation conditions at any angle of the knee joint. An M-wave is considered to indicate the stimulation conditions, because it is the waveform that results from direct stimulation to the axon of the alpha motor neuron. T...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/BF02351018

    authors: Tanabe S,Muraoka Y,Tomita Y

    更新日期:2004-01-01 00:00:00

  • A new combination: scale-space filtering of projected brain activities.

    abstract::In the present study, well known scale-space filtering (SSF) algorithm is used in combination with a linear mapping approach (LMA) to obtain clear auditory evoked potential (EP) waveform. The proposed combination involves two sequential steps: At first, the EEG noise level is reduced from -5 to 0 dB owing to the LMA b...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-009-0450-3

    authors: Aydin S

    更新日期:2009-04-01 00:00:00

  • Model of glucose sensor error components: identification and assessment for new Dexcom G4 generation devices.

    abstract::It is clinically well-established that minimally invasive subcutaneous continuous glucose monitoring (CGM) sensors can significantly improve diabetes treatment. However, CGM readings are still not as reliable as those provided by standard fingerprick blood glucose (BG) meters. In addition to unavoidable random measure...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-014-1226-y

    authors: Facchinetti A,Del Favero S,Sparacino G,Cobelli C

    更新日期:2015-12-01 00:00:00

  • Improvement of spike train decoder under spike detection and classification errors using support vector machine.

    abstract::The successful decoding of kinematic variables from spike trains of motor cortical neurons is essential for cortical neural prosthesis. Spike trains from each single unit must be extracted from extracellular neural signals and, thus, spike detection and sorting procedure is indispensable but the detection and sorting ...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-005-0009-x

    authors: Kim KH,Kim SS,Kim SJ

    更新日期:2006-03-01 00:00:00

  • Dynamic thermographic imaging method for quantifying dermal perfusion: potential and limitations.

    abstract::A new method of quantifying dermal perfusion on a regional basis using a dynamic thermographic technique is investigated. The technique is based on the relationship between dermal perfusion and the rate of skin surface reheating following the application of a transient cold challenge predicted by a theoretical model. ...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/BF02441468

    authors: Wilson SB,Spence VA

    更新日期:1989-09-01 00:00:00

  • Opportunities for the cellular approach in biomedical engineering.

    abstract::This review is a commentary on recent, altered perspectives about biomedical engineering and its role in medicine. It is argued that, rather than being a peripheral specialty, medical engineering and engineering principles in general have a direct application to biochemical medicine and cell biology. A brief descripti...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章,评审

    doi:10.1007/BF02446170

    authors: Vadgama P

    更新日期:1992-07-01 00:00:00

  • Biphasic model of the trabecular meshwork in the eye.

    abstract::A biphasic continuum model for the flow of intraocular fluid, the aqueous humour, in the trabecular meshwork is proposed in the paper. The model considers the meshwork as a circular ring with uniform thickness of homogeneous, isotropic, viscoelastic material swollen with continuously percolating aqueous humour. The mo...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/BF02446710

    authors: Tandon PN,Autar R

    更新日期:1991-05-01 00:00:00

  • Parametric recursive system identification and self-adaptive modeling of the human energy metabolism for adaptive control of fat weight.

    abstract::A mathematical model has been developed to facilitate indirect measurements of difficult to measure variables of the human energy metabolism on a daily basis. The model performs recursive system identification of the parameters of the metabolic model of the human energy metabolism using the law of conservation of ener...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-016-1552-3

    authors: Őri ZP

    更新日期:2017-05-01 00:00:00

  • Morphology analysis of vertebral trabecular bone under dynamic loading based on multi-scale theory.

    abstract::Trabecular bone has a complicated porous microstructure and consists of interconnected plates and rods known as trabeculae. The microarchitecture of the trabeculae contributes to load distribution capacity and, particularly, the optimal bone strength. Many previous studies have shown that morphological parameters are ...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-012-0951-3

    authors: Basaruddin KS,Takano N,Yoshiwara Y,Nakano T

    更新日期:2012-10-01 00:00:00

  • Improved performance of intravascular pO2 sensor incorporating poly(MPC-co-BMA) membrane.

    abstract::The first in vivo evaluation of a pO2 sensor constructed with a novel copolymer is described. The performance of the sensor is assessed under dynamic conditions in vitro and in vivo. This sensor is more stable and reliable than the control sensor with a heparin-treated polyethylene membrane. ...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/BF02511245

    authors: Zhang S,Wright G,Kingston MA,Rolfe P

    更新日期:1996-07-01 00:00:00

  • A cepstrum analysis-based classification method for hand movement surface EMG signals.

    abstract::It is of great importance to effectively process and interpret surface electromyogram (sEMG) signals to actuate a robotic and prosthetic exoskeleton hand needed by hand amputees. In this paper, we have proposed a cepstrum analysis-based method for classification of basic hand movement sEMG signals. Cepstral analysis t...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-019-02024-8

    authors: Yavuz E,Eyupoglu C

    更新日期:2019-10-01 00:00:00

  • Feature extraction for on-line EEG classification using principal components and linear discriminants.

    abstract::The study focuses on the problems of dimensionality reduction by means of principal component analysis (PCA) in the context of single-trial EEG data classification (i.e. discriminating between imagined left- and right-hand movement). The principal components with the highest variance, however, do not necessarily carry...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/BF02522476

    authors: Lugger K,Flotzinger D,Schlögl A,Pregenzer M,Pfurtscheller G

    更新日期:1998-05-01 00:00:00

  • Continuous cardiac output monitoring system.

    abstract::A continuous cardiac output monitoring system has been developed in the laboratory to allow the real-time measurement of the cardiac output. This form of continuous cardiac output measurement allows the doctor to view the beat-to-beat cardiac output and can be employed to measure artery constrictions as well. The sens...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/BF02345272

    authors: Tjin SC,Ho YC,Lam YZ,Hao J,Ng BK

    更新日期:2001-01-01 00:00:00

  • Prototype algorithm for automated determination of gastric slow wave characteristics.

    abstract::An algorithm for determining the frequency and propagation time of the gastric slow wave has been designed for integration into a demand gastric pacing system. The algorithm analyses the serosal activity in both the time and frequency domains, and the results are compared to produce a conclusion only when the values a...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/BF02344688

    authors: Gray MB,Williams RD,Chen JD

    更新日期:2000-01-01 00:00:00

  • Classifying changes in LN-18 glial cell morphology: a supervised machine learning approach to analyzing cell microscopy data via FIJI and WEKA.

    abstract::In cell-based research, the process of visually monitoring cells generates large image datasets that need to be evaluated for quantifiable information in order to track the effectiveness of treatments in vitro. With the traditional, end-point assay-based approach being error-prone, and existing computational approache...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-020-02177-x

    authors: Mbiki S,McClendon J,Alexander-Bryant A,Gilmore J

    更新日期:2020-07-01 00:00:00

  • Design and application of sensor for recording sounds over human eye and nose.

    abstract::The recording of sounds over the orbit of the eye has been found to be useful in the detection of intracranial aneurysms. A hydrophone for auscultation over the eye has been developed and is tested under controlled conditions. The tests consist of measurement over the eyes in three healthy volunteers at rest, during v...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/BF02523031

    authors: Journée HL,van Bruggen AC,van der Meer JJ,de Jonge AB,Mooij JJ

    更新日期:1995-03-01 00:00:00

  • Subject-specific finite element analysis of a lumbar cage produced by electron beam melting.

    abstract::The aim of this study was the analysis of the mechanical behaviour of a partially porous lumbar custom-made cage by means of a subject-specific finite element analysis (FEA). The cage, made of Ti6Al4V ELI alloy, was produced via electron beam melting (EBM) process and surgically implanted in a female subject, 50 years...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-019-02078-8

    authors: Epasto G,Distefano F,Mineo R,Guglielmino E

    更新日期:2019-12-01 00:00:00

  • Inhibition of TNF-alpha induced cell death in human umbilical vein endothelial cells and Jurkat cells by protocatechuic acid.

    abstract::The Chinese herb radix Salviae miltiorrhizae (RSM) is used in traditional Chinese medicine as a treatment for cardiovascular and cerebrovascular diseases. Several components of the plant extract from salvia mitorrhiza bunge have been determined previously, one of which is protocatechuic acid (PAC). It has been found, ...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/BF02345308

    authors: Zhou-Stache J,Buettner R,Artmann G,Mittermayer C,Bosserhoff AK

    更新日期:2002-11-01 00:00:00

  • Detection of compressed tracheal sound patterns with large amplitude variation during sleep.

    abstract::The objective of the present work was to develop automated methods for the compressed tracheal breathing sound analysis. Overnight tracheal breathing sound was recorded from ten apnoea patients. From each patient, three different types of tracheal sound deflection pattern, each of 10 min duration, were visually scored...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-008-0317-z

    authors: Kulkas A,Rauhala E,Huupponen E,Virkkala J,Tenhunen M,Saastamoinen A,Himanen SL

    更新日期:2008-04-01 00:00:00

  • Experimental and numerical investigation on soft tissue dynamic response due to turbulence-induced arterial vibration.

    abstract::Peripheral arterial occlusive disease is a serious cardiovascular disorder. The arterial occlusion leads to turbulent flow and arterial sound generation on the inner vessel wall. Stenosis-induced vibro-acoustic waves propagate through the surrounding soft tissues and reach the skin surface. In this study, the feasibil...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-019-01995-y

    authors: Salman HE,Yazicioglu Y

    更新日期:2019-08-01 00:00:00

  • Dual-sectored transurethral ultrasound for thermal treatment of stress urinary incontinence: in silico studies in 3D anatomical models.

    abstract::The purpose of this study is to investigate the feasibility and performance of a stationary, non-focused dual-sectored tubular transurethral ultrasound applicator for thermal exposure of tissue regions adjacent to the urethra for treatment of stress urinary incontinence (SUI) through acoustic and biothermal simulation...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-020-02152-6

    authors: Liu D,Adams M,Burdette EC,Diederich CJ

    更新日期:2020-06-01 00:00:00

  • Dialysate-side urea kinetics. Neural network predicts dialysis dose during dialysis.

    abstract::Determination of the adequacy of dialysis is a routine but crucial procedure in patient evaluation. The total dialysis dose, expressed as Kt/V, has been widely recognised to be a major determinant of morbidity and mortality in haemodialysed patients. Many different factors influence the correct determination of Kt/V, ...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/BF02348080

    authors: Fernández EA,Valtuille R,Willshaw P,Perazzo CA

    更新日期:2003-07-01 00:00:00

  • Structuring of service centres for economic and equipment efficiency.

    abstract::Increasing costs in healthcare have stimulated discussions on whether installation of competent in-house service groups for equipment management could eventually aid in reducing expenditure. In the Federal Republic of Germany, a four-year programme was initiated in 1979 with the purpose of investigating the feasibilit...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/BF02442172

    authors: Irnich W

    更新日期:1989-01-01 00:00:00

  • Using nonlinear finite element models to analyse stress distribution during subluxation and torque required for dislocation of newly developed total hip structure after prosthetic impingement.

    abstract::Dislocation is a serious potential complication of total hip replacement. Previous studies have proposed a newly developed total hip structure that meets the required oscillation angle of 120°, for which the chamfer on the acetabular liner rim was designed to enable the neck to impinge on the chamfer over a large area...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-017-1673-3

    authors: Chi WM,Lin CC,Ho YJ,Lin HC,Chen JH

    更新日期:2018-01-01 00:00:00

  • Technique for the evaluation of derivatives from noisy biomechanical displacement data using a model-based bandwidth-selection procedure.

    abstract::Smoothing and differentiation of noisy signals are common problems whenever it is difficult or impossible to obtain derivatives by direct measurement. In biomechanics body displacements are frequently assessed and these measurements are affected by noise. To avoid high-frequency noise magnification, data filtering bef...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/BF02441963

    authors: D'Amico M,Ferrigno G

    更新日期:1990-09-01 00:00:00

  • The past, present, and prospective on UV-VIS-NIR skin photonics and spectroscopy-a wavelength guide.

    abstract::The study and applications of in vivo skin optics have been openly documented as early as the year 1954, or possibly earlier. To date, challenges in analyzing the complexities of this field remain, with wide scopes requiring more scrutiny. Recent advances in spectroscopic research and multivariate analytics allow a cl...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章,评审

    doi:10.1007/s11517-019-02077-9

    authors: Poh AH,Adikan FRM,Moghavvemi M

    更新日期:2020-06-01 00:00:00

  • System identification of evoked mechanomyogram from abductor pollicis brevis muscle in isometric contraction.

    abstract::The purpose of this study is to verify the applicability of a sixth-order model to the mechanomyogram (MMG) system of the parallel-fibered muscle, which was identified from the MMG of the pennation muscle. The median nerve was stimulated, and an MMG and torque of the abductor pollicis brevis muscle were measured. The ...

    journal_title:Medical & biological engineering & computing

    pub_type: 杂志文章

    doi:10.1007/s11517-013-1107-9

    authors: Uchiyama T,Sakai H

    更新日期:2013-12-01 00:00:00