Estimation of outcrossing rates at hierarchical levels of fruits, individuals, populations and species in Magnolia stellata.

Abstract:

:In plant species with mixed mating systems, differences in diverse factors-including their pollination system, flowering phenology, life form and susceptibility to inbreeding depression-cause variation in outcrossing rates among fruits within individuals, among individuals within populations and among populations within species. To quantify this hierarchical variation, we examined outcrossing rates at the seed stage in five populations of Magnolia stellata, a self-compatible, insect-pollinated and protogynous tree species. For this purpose, we sampled 1498 seeds within 204 fruits obtained from 56 individuals of the five populations, determined genotypes of the sampled seeds and maternal individuals at six polymorphic microsatellite loci, then estimated outcrossing rates and their variance components at four hierarchical levels (fruits, individuals, populations and species) using a nested analysis of variance-type linear model with a Bayesian approach. The species-level outcrossing rate was 0.730 (95% credible interval, 0.595-0.842), indicating that this species has a mixed mating system. Outcrossing rates were not significantly different among populations, but were significantly different among individuals within populations. Variance components at the levels of individual and fruit were statistically supported and were highest for the former. Thus, factors influencing outcrossing rates at the individual level, such as differences in flowering phenology and early-stage inbreeding depression, appear to have important effects within these M. stellata populations, but not among them. The method of hierarchically estimating outcrossing rates using a Bayesian approach, as applied in this study, is compared with conventional methods for estimating outcrossing rates, and the statistical properties of the Bayesian approach are discussed.

journal_name

Heredity (Edinb)

journal_title

Heredity

authors

Tamaki I,Setsuko S,Tomaru N

doi

10.1038/hdy.2008.128

subject

Has Abstract

pub_date

2009-04-01 00:00:00

pages

381-8

issue

4

eissn

0018-067X

issn

1365-2540

pii

hdy2008128

journal_volume

102

pub_type

杂志文章

相关文献

HEREDITY文献大全
  • Lack of genetic differentiation among widely spaced subpopulations of a butterfly with home range behaviour.

    abstract::We examine seven geographically separate subpopulations of Heliconius charithonia, a butterfly with well-documented home range behaviour, in Miami-Dade County, Florida, for genetic differentiation using cellulose acetate electrophoresis. These subpopulations exhibit little genetic variation (percent polymorphic loci =...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1046/j.1365-2540.2001.00830.x

    authors: Kronforst MR,Fleming TH

    更新日期:2001-02-01 00:00:00

  • Maternal-by-environment but not genotype-by-environment interactions in a fish without parental care.

    abstract::The impact of environmental conditions on the expression of genetic variance and on maternal effects variance remains an important question in evolutionary quantitative genetics. We investigate here the effects of early environment on variation in seven adult life history, morphological, and secondary sexual traits (i...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/s41437-017-0029-y

    authors: Vega-Trejo R,Head ML,Jennions MD,Kruuk LEB

    更新日期:2018-01-01 00:00:00

  • Fine-scale differentiation between sockeye salmon ecotypes and the effect of phenotype on straying.

    abstract::A long-standing goal of evolutionary biology is to understand the factors that drive population divergence, local adaptation and speciation. In particular, the effect of selection against dispersers on gene flow and local adaptation has attracted interest, although empirical data on phenotypic characters of dispersers...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2008.59

    authors: Lin J,Quinn TP,Hilborn R,Hauser L

    更新日期:2008-10-01 00:00:00

  • The effects of outbreeding on a parasitoid wasp fixed for infection with a parthenogenesis-inducing Wolbachia symbiont.

    abstract::Trichogramma wasps can be rendered asexual by infection with the maternally inherited symbiont Wolbachia. Previous studies indicate the Wolbachia strains infecting Trichogramma wasps are host-specific, inferred by failed horizontal transfer of Wolbachia to novel Trichogramma hosts. Additionally, Trichogramma can becom...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2017.53

    authors: Lindsey ARI,Stouthamer R

    更新日期:2017-12-01 00:00:00

  • Genetic differences between the Chinese and European races of the common carp.I. Analysis of genotype-environment interactions for growth rate.

    abstract::Growth rate of 12 groups of common carp was measured at five experimental environments. Three of the 12 tested groups were strains of the domesticated European race of the common carp, one group was a representative of the Big-Belly Chinese race, and the remaining eight groups were F1 crossbreds among the European str...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1975.42

    authors: Moav R,Hulata G,Wohlfarth G

    更新日期:1975-06-01 00:00:00

  • Effect of inbreeding and heritability of sperm competition success in the bulb mite Rhizoglyphus robini.

    abstract::Sperm competition is a potent evolutionary force shaping the reproductive biology of most animal species. Here, we estimated the heritability of sperm competition success in the promiscuous bulb mite Rhizoglyphus robini. Sperm competition success was measured with the sterile male technique as the proportion of eggs f...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800649

    authors: Konior M,Keller L,Radwan J

    更新日期:2005-06-01 00:00:00

  • Properties of re-arranged P elements in Drosophila melanogaster.

    abstract::P elements, both complete and incomplete, contain a left and right end, normally depicted as pointing away from each other. Here, we examine the properties of P elements that may be described as 're-arranged elements' or 'inside-out elements', containing inverted ends. Two such structures exist, having either ends poi...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2009.1

    authors: Liang X,Sved JA

    更新日期:2009-04-01 00:00:00

  • Adjusting multiple testing in multilocus analyses using the eigenvalues of a correlation matrix.

    abstract::Correlated multiple testing is widely performed in genetic research, particularly in multilocus analyses of complex diseases. Failure to control appropriately for the effect of multiple testing will either result in a flood of false-positive claims or in true hits being overlooked. Cheverud proposed the idea of adjust...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800717

    authors: Li J,Ji L

    更新日期:2005-09-01 00:00:00

  • Lost in the zygote: the dilution of paternal mtDNA upon fertilization.

    abstract::The mechanisms by which paternal inheritance of mitochondrial DNA (mtDNA) (paternal leakage) and, subsequently, recombination of mtDNA are prevented vary in a species-specific manner with one mechanism in common: paternally derived mtDNA is assumed to be vastly outnumbered by maternal mtDNA in the zygote. To date, thi...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2008.74

    authors: Wolff JN,Gemmell NJ

    更新日期:2008-11-01 00:00:00

  • Ancestral whole-genome duplication in the marine chelicerate horseshoe crabs.

    abstract::This corrects the article DOI: 10.1038/hdy.2015.89. ...

    journal_title:Heredity

    pub_type: 杂志文章,已发布勘误

    doi:10.1038/hdy.2017.38

    authors: Kenny NJ,Chan KW,Nong W,Qu Z,Maeso I,Yip HY,Chan TF,Kwan HS,Holland PWH,Chu KH,Hui JHL

    更新日期:2017-11-01 00:00:00

  • Segregating variation for temperature-dependent sex determination in a lizard.

    abstract::Temperature-dependent sex determination (TSD) was first reported in 1966 in an African lizard. It has since been shown that TSD occurs in some fish, several lizards, tuataras, numerous turtles and all crocodilians. Extreme temperatures can also cause sex reversal in several amphibians and lizards with genotypic sex de...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2010.102

    authors: Rhen T,Schroeder A,Sakata JT,Huang V,Crews D

    更新日期:2011-04-01 00:00:00

  • Population dynamics of the symbiotic mushroom Hebeloma cylindrosporum: mycelial persistence and inbreeding.

    abstract::The pattern of colonization of a forest site by the ectomycorrhizal basidiomycete fungus Hebeloma cylindrosporum Romagnesi was followed from 1993 until 1997. Fruit-bodies of this tetrapolar heterothallic species were mapped, collected and propagated as pure mycelial cultures. Isolates were analysed for their mating-ty...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1046/j.1365-2540.2000.00668.x

    authors: Gryta H,Debaud JC,Marmeisse R

    更新日期:2000-03-01 00:00:00

  • Genetic rescue in interconnected populations of small and large size of the self-incompatible Ranunculus reptans.

    abstract::Small populations of our study species Ranunculus reptans have reduced fitness because of inbreeding, genetic load, and reduced mate availability; that is, they suffer from a three-fold genetic Allee effect. Here, we investigate how the effect of interpopulation outbreeding on offspring fitness depends on population s...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800732

    authors: Willi Y,Fischer M

    更新日期:2005-12-01 00:00:00

  • Galton's law of ancestral heredity.

    abstract::Galton's ancestral law states that the two parent contribute between them on average one-half of the total heritage of the offspring, the four grandparents one-quarter, and so on. He interpreted this law both as a representation of the separate contributions of each ancestor to the heritage of the offspring and as a m...

    journal_title:Heredity

    pub_type: 传,历史文章,杂志文章

    doi:10.1046/j.1365-2540.1998.00418.x

    authors: Bulmer M

    更新日期:1998-11-01 00:00:00

  • Inter and intraspecific variation in nuclear DNA content in Aedes mosquitoes.

    abstract::Haploid nuclear DNA of 23 species of Aedes, as determined by Feulgen cytophotometry, was found to vary 3-fold. This was accompanied by a 2-fold variation in total chromosomal length. There was a significant correlation (r = 0.765, P less than 0.001) between these two parameters. Genome size varied from 0.87 pg to 1.3 ...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1987.120

    authors: Rao PN,Rai K

    更新日期:1987-10-01 00:00:00

  • Evolutionary divergence of the oncogenes GLI, HST and INT2.

    abstract::Almost a quarter of a century ago, the banding patterns of human and other higher primate chromosomes were compared, creating a barrage of speculation. Consequently, a number of approaches have been used to understand human descent. Chromosome modifications are believed to be important in the origin of species, and pe...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1046/j.1365-2540.1998.00362.x

    authors: Conte RA,Samonte RV,Verma RS

    更新日期:1998-07-01 00:00:00

  • Comparison of population genetic structures of common wild rice (Oryza rufipogon Griff.), as revealed by analyses of quantitative traits, allozymes, and RFLPs.

    abstract::We investigated genetic diversity among and within natural populations of Asian common wild rice, Oryza rufipogon, from three different classes of data: quantitative traits, allozymes, and restriction fragment length polymorphisms (RFLPs). The seven populations examined showed polymorphism to varying degrees. The amou...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800435

    authors: Cai HW,Wang XK,Morishima H

    更新日期:2004-05-01 00:00:00

  • Physical distribution of SINE elements in the chromosomes of Atlantic salmon and rainbow trout.

    abstract::SINE sequences are interspersed throughout virtually all eukaryotic genomes. In the family Salmonidae three families of SINEs have been identified. In this work we have attempted to characterize and locate by means of fluorescent in situ hybridization (FISH) one of these families (HpaI) in the genome of Atlantic salmo...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6886210

    authors: Perez J,Garcia-Vazquez E,Moran P

    更新日期:1999-11-01 00:00:00

  • Increased recombination frequencies resulting from directional selection for geotaxis in Drosophila.

    abstract::Several classes of models have been suggested to explain how natural selection can favour non-zero recombination. Directional and fluctuating selection, abiotic and biotic, and selection against harmful mutations seem to be the most plausible factors, but little has been done to test the problem experimentally. Here w...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1994.7

    authors: Korol AB,Iliadi KG

    更新日期:1994-01-01 00:00:00

  • Genetic effects of rainforest fragmentation in an early successional tree (Elaeocarpus grandis).

    abstract::Rainforests in Australia and around the world have been extensively cleared and degraded. It is essential to recognize the changes in population diversity and dynamics that follow habitat fragmentation if better conservation and management strategies are to be developed. This study is an investigation of the medium te...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800585

    authors: Rossetto M,Jones R,Hunter J

    更新日期:2004-12-01 00:00:00

  • Inversion polymorphism and extra bristles in Indian natural populations of Drosophila ananassae: joint variation.

    abstract::Five Indian natural populations of Drosophila ananassae were analysed for chromosome inversions and the presence of individuals with extra scutellar bristles in the F1 progeny of isofemale lines initiated from naturally impregnated females. Three commonly occurring inversions were found in these populations with varyi...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1994.188

    authors: Das A,Mohanty S,Parida BB

    更新日期:1994-10-01 00:00:00

  • Enhancing genetic disease control by selecting for lower host infectivity and susceptibility.

    abstract::Infectious diseases have a huge impact on animal health, production and welfare, and human health. Understanding the role of host genetics in disease spread is important for developing disease control strategies that efficiently reduce infection incidence and risk of epidemics. While heritable variation in disease sus...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/s41437-018-0176-9

    authors: Tsairidou S,Anacleto O,Woolliams JA,Doeschl-Wilson A

    更新日期:2019-06-01 00:00:00

  • The alcohol dehydrogenase polymorphism in natural populations of Drosophila melanogaster: restriction map variation in the region of the Adh locus in populations from two hemispheres.

    abstract::Restriction endonuclease variation in the 12 kb region surrounding the Adh locus was measured in seven Australian and six Chinese populations of Drosophila melanogaster. There is a higher level of nucleotide-substitution variation in the Australian populations than in the Chinese, which is possibly a reflection of the...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1992.1

    authors: Jiang JC,Gibson JB

    更新日期:1992-01-01 00:00:00

  • Patterns in genetic diversity of Trifolium pallescens populations do not reflect chronosequence on alpine glacier forelands.

    abstract::How does genetic diversity within populations of plants develop during primary succession on alpine glacier forelands? Theory predicts that pioneer populations are characterized by low genetic diversity due to founder effects and that genetic diversity increases within populations as they mature and recurrent gene flo...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2008.8

    authors: Raffl C,Holderegger R,Parson W,Erschbamer B

    更新日期:2008-05-01 00:00:00

  • Temporal changes in allele frequency, genetic variation and inbreeding depression in small populations of the guppy, Poecilia reticulata.

    abstract::We established three closed lines of N = 10 for the guppy Poecilia reticulata, to evaluate the relationships among temporal changes in allele frequency, genetic variation and inbreeding depression for a fitness-related trait in small populations. Genetic variation at the allozyme loci, expressed by the proportion of p...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1046/j.1365-2540.2001.00792.x

    authors: Shikano T,Chiyokubo T,Taniguchi N

    更新日期:2001-02-01 00:00:00

  • Quantifying heritable variation in fitness-related traits of wild, farmed and hybrid Atlantic salmon families in a wild river environment.

    abstract::Farmed fish are typically genetically different from wild conspecifics. Escapees from fish farms may contribute one-way gene flow from farm to wild gene pools, which can depress population productivity, dilute local adaptations and disrupt coadapted gene complexes. Here, we reanalyse data from two experiments (McGinni...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2015.29

    authors: Reed TE,Prodöhl P,Hynes R,Cross T,Ferguson A,McGinnity P

    更新日期:2015-08-01 00:00:00

  • The threshold model as a general purpose normalizing transformation.

    abstract::The estimation of heritabilities and genetic correlations is based on the assumption that the trait distributions are normal. When the distributions are not normal it is advisable to transform the data to produce normality. However, it is possible that no suitable transformation can be found. The purpose of the presen...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1046/j.1365-2540.2001.00844.x

    authors: Roff DA

    更新日期:2001-04-01 00:00:00

  • Genetic mapping of three quantitative trait loci for soybean aphid resistance in PI 567324.

    abstract::Host-plant resistance is an effective method for controlling soybean aphid (Aphis glycines Matsumura), the most damaging insect pest of soybean (Glycine max (L.) Merr.) in North America. Recently, resistant soybean lines have been discovered and at least four aphid resistance genes (Rag1, Rag2, Rag3 and rag4) have bee...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2013.10

    authors: Jun TH,Rouf Mian MA,Michel AP

    更新日期:2013-07-01 00:00:00

  • Larval competition in Drosophila melanogaster. II. Comparing biological and competitive parameters.

    abstract::Recent developments in the analysis of density dependent competition in Drosophila melanogaster have identified two distinct parameters, namely the competitive pressure or aggression exerted by a genotype and the sensitivity or response of a genotype to such aggression. Assuming that response is more related to the ef...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1988.34

    authors: de Miranda JR,Eggleston P

    更新日期:1988-04-01 00:00:00

  • Modelling the impact of colonisation on genetic diversity and differentiation of forest trees: interaction of life cycle, pollen flow and seed long-distance dispersal.

    abstract::It was shown previously that the long lifespan and juvenile phase of trees strongly attenuate founder effects during colonisation in a diffusive dispersal model. However, this model yielded too slow a colonisation rate in comparison with palynological data for temperate forest trees. Since rare long-distance dispersal...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800243

    authors: Austerlitz F,Garnier-Géré PH

    更新日期:2003-04-01 00:00:00