Differential contributions of recognition factors of two plant lectins -Amaranthus caudatus lectin and Arachis hypogea agglutinin, reacting with Thomsen-Friedenreich disaccharide (Galbeta1-3GalNAcalpha1-Ser/Thr).

Abstract:

:Previous reports on the carbohydrate specificities of Amaranthus caudatus lectin (ACL) and peanut agglutinin (PNA, Arachis hypogea) indicated that they share the same specificity for the Thomsen-Friedenreich (T(alpha), Galbeta1-3GalNAcalpha1-Ser/Thr) glycotope, but differ in monosaccharide binding--GalNAc>Gal (inactive) for ACL; Gal>GalNAc (weak) with respect to PNA. However, knowledge of the recognition factors of these lectins was based on studies with a small number monosaccharides and T-related oligosaccharides. In this study, a wider range of interacting factors of ACL and PNA toward known mammalian structural units, natural polyvalent glycotopes and glycans were examined by enzyme-linked lectinosorbent and inhibition assays. The results indicate that the main recognition factors of ACL, GalNAc was the only monosaccharide recognized by ACL as such, its polyvalent forms (poly GalNAcalpha1-Ser/Thr, Tn in asialo OSM) were not recognized much better. Human blood group precursor disaccharides Galbeta1-3/4GlcNAcbeta (I(beta)/II(beta)) were weak ligands, while their clusters (multiantennary II(beta)) and polyvalent forms were active. The major recognition factors of PNA were a combination of alpha or beta anomers of T disaccharide and their polyvalent complexes. Although I(beta)/II(beta) were weak haptens, their polyvalent forms played a significant role in binding. From the 50% molar inhibition profile, the shape of the ACL combining site appears to be a cavity type and most complementary to a disaccharide of Galbeta1-3GalNAc (T), while the PNA binding domain is proposed to be Galbeta1-3GalNAcalpha or beta1--as the major combining site with an adjoining subsite (partial cavity type) for a disaccharide, and most complementary to the linear tetrasaccharide, Galbeta1-3GalNAcbeta1-4Galbeta1-4Glc (T(beta)1-4L, asialo GM(1) sequence). These results should help us understand the differential contributions of polyvalent ligands, glycotopes and subtopes for the interaction with these lectins to binding, and make them useful tools to study glycosciences, glycomarkers and their biological functions.

journal_name

Biochimie

journal_title

Biochimie

authors

Wu AM,Wu JH,Yang Z,Singh T,Goldstein IJ,Sharon N

doi

10.1016/j.biochi.2008.08.001

subject

Has Abstract

pub_date

2008-11-01 00:00:00

pages

1769-80

issue

11-12

eissn

0300-9084

issn

1638-6183

pii

S0300-9084(08)00250-2

journal_volume

90

pub_type

杂志文章
  • The formation of an intrachain disulfide bond in the leptin protein is necessary for efficient leptin secretion.

    abstract::Leptin is a cytokine secreted by the adipose tissue that is involved in the control of body weight. We previously showed that a point mutation (R105W) in leptin results in leptin deficiency, marked obesity and hypogonadism in humans adults. Expression in COS1 cells showed impaired secretion and intracellular accumulat...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2004.06.005

    authors: Boute N,Zilberfarb V,Camoin L,Bonnafous S,Le Marchand-Brustel Y,Issad T

    更新日期:2004-06-01 00:00:00

  • Antiarthritic and antiinflammatory propensity of 4-methylesculetin, a coumarin derivative.

    abstract::Coumarins are a group of natural compounds widely distributed in plants. Of late, coumarins and their derivatives have grabbed much attention from the pharmacological and pharmaceutical arena due to their broad range of therapeutical qualities. A coumarin derivative 4-methylesculetin (4-ME) has known to possess effect...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2013.02.014

    authors: Hemshekhar M,Sunitha K,Thushara RM,Sebastin Santhosh M,Shanmuga Sundaram M,Kemparaju K,Girish KS

    更新日期:2013-06-01 00:00:00

  • Proteins involved in sleep homeostasis: Biophysical characterization of INC and its partners.

    abstract::The insomniac protein of Drosophila melanogaster (INC) has a crucial role in sleep homeostasis as flies lacking the inc gene exhibit strikingly reduced and poorly consolidated sleep. Nevertheless, in vitro characterizations of INC biophysical properties and partnerships have not been yet reported. Here we report the h...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2016.09.013

    authors: Pirone L,Smaldone G,Esposito C,Balasco N,Petoukhov MV,Spilotros A,Svergun DI,Di Gaetano S,Vitagliano L,Pedone EM

    更新日期:2016-12-01 00:00:00

  • Postnatal diagnosis of peroxisomal disorders: a biochemical approach.

    abstract::In recent years an increasing number of inherited decreases in man has been identified in which there is an impairment of one or more peroxisomal functions. Sofar 15 different peroxisomal disorders have been identified which can be subdivided into three distinct groups depending upon whether there is a generalized (gr...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/0300-9084(93)90087-9

    authors: Wanders RJ,Schutgens RB,Barth PG,Tager JM,van den Bosch H

    更新日期:1993-01-01 00:00:00

  • [Inducible cephalosporinases from Proteus morganii].

    abstract::It has been shown that two Proteus morganii strains produce an inducible cephalosporinase. No significative difference was shown between them: they present the same isoelectric poit: 8,3 and very similar kinetic constants. The parameter tau, proportional to the half life of antibiotic at low concentration, in presence...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/s0300-9084(76)80086-7

    authors: Labia R,Guionie M,Fabre C

    更新日期:1976-11-13 00:00:00

  • Residual structure and dynamics in DMSO-d6 denatured dynein light chain protein.

    abstract::Structural and motional features in the denatured state of a protein dictate the early folding events starting from that state and these features vary depending upon the nature of the denaturant used. Here, we have attempted to decipher the early events in the folding of Dynein Light Chain protein (DLC8), starting fro...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2011.10.013

    authors: Chakraborty S,Mohan PM,Hosur RV

    更新日期:2012-01-01 00:00:00

  • Selection of RNA aptamers against recombinant transforming growth factor-beta type III receptor displayed on cell surface.

    abstract::In most cases, anti-protein aptamers are selected by systematic evolution of ligands by exponential enrichment (SELEX) using purified recombinant protein targets. Cell surface proteins, however, are not easy targets for SELEX due to the difficulties associated with their purification. Here, we developed a novel SELEX ...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2006.02.004

    authors: Ohuchi SP,Ohtsu T,Nakamura Y

    更新日期:2006-07-01 00:00:00

  • Dyskeratosis congenita: the diverse clinical presentation of mutations in the telomerase complex.

    abstract::Dyskeratosis congenita is an inherited syndrome characterised by mucocutaneous features, bone marrow failure, an increased risk of malignancy and other somatic abnormalities. There is a considerable range of clinical severity and in its occult form the disease may present as idiopathic aplastic anaemia. Genes responsi...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/j.biochi.2007.07.017

    authors: Vulliamy TJ,Dokal I

    更新日期:2008-01-01 00:00:00

  • Human erythrocyte phosphoglucomutase: comparison of the kinetic properties of PGM1 and PGM2 isoenzymes.

    abstract::Kinetic properties of PGM1 and PGM2 phosphoglucomutase "primary" isoenzymes from human erythrocytes were studied. The two enzyme forms share a "ping-pong" kinetic mechanism and show similar Km for substrate (glucose 1-P) and cofactor (glucose 1,6-P2). Micromolar concentrations of fructose 1,6-P2 and glycerate 2,3-P2 i...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/0300-9084(84)90115-9

    authors: Ninfali P,Accorsi A,Palma F,Fazi A,Piatti E,Chiarantini L,Fornaini G

    更新日期:1984-09-01 00:00:00

  • Anticancer molecule AS1411 exhibits low nanomolar antiviral activity against HIV-1.

    abstract::During clinical trials, a number of fully characterized molecules are dropped along the way because they do not provide enough benefit for the patient. Some of them show limited side effects and might be of great use for other applications. AS1411 is a nucleolin-targeting aptamer that underwent phase II clinical trial...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2015.09.009

    authors: Métifiot M,Amrane S,Mergny JL,Andreola ML

    更新日期:2015-11-01 00:00:00

  • Lipidomic approaches to the study of phospholipase A2-regulated phospholipid fatty acid incorporation and remodeling.

    abstract::The distribution of fatty acids among cellular glycerophospholipids is finely regulated by the CoA-dependent acylation of lysophospholipids followed by transacylation reactions. Arachidonic acid is the fatty acid precursor of a wide family of bioactive compounds called the eicosanoids, with key roles in innate immunit...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/j.biochi.2009.11.010

    authors: Balgoma D,Montero O,Balboa MA,Balsinde J

    更新日期:2010-06-01 00:00:00

  • Development and preclinical evaluation of a new F(ab')₂ antitoxin against botulinum neurotoxin serotype A.

    abstract::Concern about the malicious applications of botulinum neurotoxin has highlighted the need for a new generation of safe and highly potent antitoxins. In this study, we developed and evaluated the preclinical pharmacology and safety of a new F(ab')₂ antitoxin against botulinum neurotoxin serotype A (BoNT/A). As an alter...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2010.06.010

    authors: Yu YZ,Zhang SM,Wang WB,Du Y,Zhu HQ,Wang RL,Zhou XW,Lin JB,Wang S,Yu WY,Huang PT,Sun ZW

    更新日期:2010-10-01 00:00:00

  • In vitro translation of human pheochromocytoma messenger RNAs: characterization of tyrosine-hydroxylase and dopamine-beta-hydroxylase.

    abstract::mRNAs extracted from human pheochromocytoma were translated in vitro in a lysate of a rabbit reticulocytes. Two enzymes of the biosynthetic pathway of the catecholamines, tyrosine-hydroxylase (TH) and dopamine-beta-hydroxylase (DBH), were characterized as translation products after immunoprecipitation by specific anti...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/s0300-9084(85)80198-x

    authors: Benlot C,Antreassian J,Henry JP,Legrand JC,Gros F,Thibault J

    更新日期:1985-06-01 00:00:00

  • Ruminococcin C, a new anti-Clostridium perfringens bacteriocin produced in the gut by the commensal bacterium Ruminococcus gnavus E1.

    abstract::When colonizing the digestive tract of mono-associated rats, Ruminococcus gnavus E1 - a bacterium isolated from human faeces - produced a trypsin-dependent anti-Clostridium perfringens substance collectively named Ruminococcin C (RumC). RumC was isolated from the caecal contents of E1-monocontaminated rats and found t...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2011.05.001

    authors: Crost EH,Ajandouz EH,Villard C,Geraert PA,Puigserver A,Fons M

    更新日期:2011-09-01 00:00:00

  • Transfer RNAs for primordial amino acids contain remnants of a primitive code at position 3 to 5.

    abstract::Analysis of the nucleotide sequence of 1,400 transfer RNAs has revealed the imprint of a prototypic genetic code in position 3-4-5 of the acceptor stem. It appears only in the transfer RNAs for the primordial amino acids ie those found by chemical condensation of a nitrogen-methane-water-ammonia mixture. The model for...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/0300-9084(90)90033-d

    authors: Möller W,Janssen GM

    更新日期:1990-05-01 00:00:00

  • The conserved nonanucleotide motif of the geminivirus stem-loop sequence promotes replicational release of virus molecules from redundant copies.

    abstract::Recombinant plasmids containing head-to-tail copies of different coat-protein replacement genomes of wheat dwarf virus (WDV) were used to study the mechanism leading to the release of replicating unit-length molecules in suspension culture cells of Triticum monococcum. For plasmids bearing two complete genomes, the vi...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/0300-9084(93)90067-3

    authors: Heyraud F,Matzeit V,Schaefer S,Schell J,Gronenborn B

    更新日期:1993-01-01 00:00:00

  • Lipidomic profiling of model organisms and the world's major pathogens.

    abstract::Lipidomics is a subspecialty of metabolomics that focuses on water insoluble metabolites that form membrane barriers. Most lipidomic databases catalog lipids from common model organisms, like humans or Escherichia coli. However, model organisms' lipid profiles show surprisingly little overlap with those of specialized...

    journal_title:Biochimie

    pub_type: 杂志文章,评审

    doi:10.1016/j.biochi.2012.08.012

    authors: Layre E,Moody DB

    更新日期:2013-01-01 00:00:00

  • Early effects of triidothyronine on the complexity of rat heart messenger RNAs.

    abstract::Triiodothyronine (T3), injected daily into rats, induces heart hypertrophy. In a recent work we have shown that a single T3 injection stimulates RNA synthesis and modifies the translational products of myocardial mRNAs in reticulocyte lysates, quantitatively and qualitatively. In this work we show that T3 induces smal...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/0300-9084(84)90113-5

    authors: Raymondjean M,Leibovitch SA,Leibovitch MP,Harel J,Kruh J

    更新日期:1984-09-01 00:00:00

  • Modification of SR-PSOX functions by multi-point mutations of basic amino acid residues.

    abstract::SR-PSOX can function as a scavenger receptor, a chemokine and an adhesion molecule, and it could be an interesting player in the formation of atherosclerotic lesions. Our previous studies demonstrated that basic amino acid residues in the chemokine domain of SR-PSOX are critical for its functions. In this study the co...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2012.09.016

    authors: Liu W,Yin L,Dai Y

    更新日期:2013-02-01 00:00:00

  • Nucleotide and deduced amino acid sequences of mutanase-like genes from Paenibacillus isolates: proposal of a new family of glycoside hydrolases.

    abstract::Three mutanase (alpha-1,3-glucanase)-producing microorganisms isolated from soil samples were identified as a relatives of Paenibacillus. A mutanase was purified to homogeneity from cultures of each, and the molecular masses of the purified enzymes were approximately 132, 141, and 141kDa, respectively. The correspondi...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2007.09.018

    authors: Hakamada Y,Sumitomo N,Ogawa A,Kawano T,Saeki K,Ozaki K,Ito S,Kobayashi T

    更新日期:2008-03-01 00:00:00

  • Design of a chemiluminescent and bioluminescent photometer.

    abstract::An apparatus for chemi- and bioluminescence measurements is described. The main features are in high sensitivity: for example, 5 10(-12) M adenosine triphosphate, 5 10(-7) M glucose, 2 10(-9) M perhydrol and 4 10(-13) M peroxidase are easily detected; its fast mixing time and the possibility of injecting a reactant, a...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/s0300-9084(80)80061-7

    authors: Arrio B,Lecuyer B,Dupaix A,Volfin P,Jousset M,Carrette A

    更新日期:1980-01-01 00:00:00

  • LPA-induced suppression of periostin in human osteosarcoma cells is mediated by the LPA(1)/Egr-1 axis.

    abstract::Lysophosphatidic acid (LPA), a naturally occurring bioactive phospholipid, mediates a multitude of (patho)physiological events including activation of mitogen-activated protein kinases (MAPKs). As LPA may induce cellular reponses in human osteosarcoma, the present study aimed at investigating expression of various LPA...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2012.05.023

    authors: Windischhofer W,Huber E,Rossmann C,Semlitsch M,Kitz K,Rauh A,Devaney T,Leis HJ,Malle E

    更新日期:2012-09-01 00:00:00

  • Elucidation of the mechanism of disulfide exchange between staphylococcal thioredoxin2 and thioredoxin reductase2: A structural insight.

    abstract::The redox homeostasis of cytoplasm is maintained by a series of disulfide exchange reactions mediated by proteins belonging to the thioredoxin superfamily. Thioredoxin and thioredoxin reductase, being the major members of the family, play a key role in oxidative stress response of Staphylococcus aureus. In this report...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2019.01.019

    authors: Bose M,Bhattacharyya S,Biswas R,Roychowdhury A,Bhattacharjee A,Ghosh AK,Das AK

    更新日期:2019-05-01 00:00:00

  • Reactivation and mutagenesis of UV irradiated lambda phage in bacteria treated with platinum (II) compounds.

    abstract::Treatment of wild type Escherichia coli with cis -Pt(NH3)2Cl2 increased the survival and frequency of clear plaques formation of lambda phage damaged by UV radiation. The reactivation process was present in an uvrA mutant and abolished in a lexA host. Trans-Pt(NH3)2Cl2 and [Pt(dien) Cl]Cl (dien = 2HN-CH2-CH2NH-CH2-CH2...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/s0300-9084(82)80099-0

    authors: Alazard RJ,Germanier M

    更新日期:1982-08-01 00:00:00

  • Detection of an extended-10 element in the promoter region of the pckA gene encoding phosphoenolpyruvate carboxykinase in Escherichia coli.

    abstract::The regulation of transcription of the pckA gene coding for phosphoenolpyruvate carboxykinase in Escherichia coli was analysed by site-directed mutagenesis of the promoter region and measurement of in vitro transcription initiation. Mutation of the guanine residue at position -14 to either cytosine or thymine was foun...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/s0300-9084(99)80052-2

    authors: Prost JF,Cozzone AJ

    更新日期:1999-03-01 00:00:00

  • Characteristics of the interaction of a treponemal hemolysin with rabbit erythrocytes.

    abstract::The mechanism of action on rabbit red cells of Treponema hyodysenteriae hemolysin was studied using volume analysis and release of hemoglobin. While fixation of the hemolysin on the erythrocytes is temperature independent, it appears that hemolysis is temperature dependent. The kinetics of hemolysis proceed according ...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/s0300-9084(80)80134-9

    authors: Saheb SA,Lafleur L

    更新日期:1980-01-01 00:00:00

  • Inhibitors of specific ceramide synthases.

    abstract::Ceramide synthases (CerSs) are key enzymes in the biosynthesis of ceramides and display a group of at least six different isoenzymes (CerS1-6). Ceramides itself are bioactive molecules. Ceramides with different N-acyl side chains (C(14:0)-Cer - C(26:0)-Cer) possess distinct roles in cell signaling. Therefore, the sele...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2011.09.007

    authors: Schiffmann S,Hartmann D,Fuchs S,Birod K,Ferreiròs N,Schreiber Y,Zivkovic A,Geisslinger G,Grösch S,Stark H

    更新日期:2012-02-01 00:00:00

  • Conformational stability and energetics of Plasmodium falciparum glutaredoxin.

    abstract::Glutaredoxins (Grxs), redox-active proteins with a typical -CPYC motif at their active sites, are involved in redox-regulatory processes and antioxidant defenses. The human malarial parasite Plasmodium falciparum possess a classical glutaredoxin (PfGrx) as well as a number of Grx-like proteins. In the present study, w...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2009.12.003

    authors: Tripathi T,Röseler A,Rahlfs S,Becker K,Bhakuni V

    更新日期:2010-03-01 00:00:00

  • 16S rRNA methyltransferase KsgA contributes to oxidative stress resistance and virulence in Staphylococcus aureus.

    abstract::We previously reported that the rRNA methyltransferases RsmI and RsmH, which are responsible for cytidine dimethylation at position 1402 of 16S rRNA in the decoding center of the ribosome, contribute to Staphylococcus aureus virulence. Here we evaluated other 16S rRNA methyltransferases, including KsgA (RsmA), RsmB/F,...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/j.biochi.2015.10.027

    authors: Kyuma T,Kizaki H,Ryuno H,Sekimizu K,Kaito C

    更新日期:2015-12-01 00:00:00

  • Inhibition of farnesylation blocks growth but not differentiation in FRTL-5 thyroid cells.

    abstract::The cholesterol lowering drug lovastatin, a competitive inhibitor of 3-hydroxy-3-methylglutaryl coenzyme A (HMG-CoA) reductase, blocks DNA synthesis and proliferation of thyrotropin (TSH) primed FRTL-5 rat thyroid cells. The blockade can be completely prevented and/or reversed by mevalonate and largely prevented and/o...

    journal_title:Biochimie

    pub_type: 杂志文章

    doi:10.1016/s0300-9084(99)80072-8

    authors: Bifulco M,Laezza C,Aloj SM

    更新日期:1999-04-01 00:00:00