Candidate gene identification approach: progress and challenges.

Abstract:

:Although it has been widely applied in identification of genes responsible for biomedically, economically, or even evolutionarily important complex and quantitative traits, traditional candidate gene approach is largely limited by its reliance on the priori knowledge about the physiological, biochemical or functional aspects of possible candidates. Such limitation results in a fatal information bottleneck, which has apparently become an obstacle for further applications of traditional candidate gene approach on many occasions. While the identification of candidate genes involved in genetic traits of specific interest remains a challenge, significant progress in this subject has been achieved in the last few years. Several strategies have been developed, or being developed, to break the barrier of information bottleneck. Recently, being a new developing method of candidate gene approach, digital candidate gene approach (DigiCGA) has emerged and been primarily applied to identify potential candidate genes in some studies. This review summarizes the progress, application software, online tools, and challenges related to this approach.

journal_name

Int J Biol Sci

authors

Zhu M,Zhao S

doi

10.7150/ijbs.3.420

subject

Has Abstract

pub_date

2007-10-25 00:00:00

pages

420-7

issue

7

issn

1449-2288

journal_volume

3

pub_type

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