Arbuscular mycorrhizal fungi and rhizospheric bacteria diversity along an altitudinal gradient in South American Puna grassland.

Abstract:

:Rhizospheric soil samples were taken from Puna native grasses along an altitudinal gradient. Biodiversity of arbuscular mycorrhizal fungi (AMF) and associated bacteria was analyzed considering altitude and grasses photosynthetic pathways (metabolic type C3, C4). Cultivation-dependent approaches were applied to obtain further information about the phylogeny of the dominating cultivable aerobic-heterotrophic bacteria communities present in rhizospheric soil samples. In average, the bacterial count ranged between 1.30 x 10(2) and 8.66 x 10(4) CFU g(-1) of dry weight of soil. Individual bacterial colonies of aerobic heterotrophic bacteria grown on R2A medium were morphologically grouped and identified as typical soil bacteria belonging to the genera Bacillus, Pseudomonas, and Arthrobacter. Ten AMF taxa were found: Acaulospora sp., A. laevis, A. spinosa, Gigaspora sp., Gi. ramisporophora, Glomus sp., Gl. aggregatum, Gl. ambisporum, Gl. sinuosum, and Scutellospora biornata. AMF diversity decreased with altitude.

journal_name

Microb Ecol

journal_title

Microbial ecology

authors

Lugo MA,Ferrero M,Menoyo E,Estévez MC,Siñeriz F,Anton A

doi

10.1007/s00248-007-9313-3

subject

Has Abstract

pub_date

2008-05-01 00:00:00

pages

705-13

issue

4

eissn

0095-3628

issn

1432-184X

journal_volume

55

pub_type

杂志文章
  • Influence of Hyphal Inoculum potential on the Competitive Success of Fungi Colonizing Wood.

    abstract::The relative amounts of hyphal inoculum in forest soils may determine the capacity for fungi to compete with and replace early colonizers of wood in ground contact. Our aim in this study was to test the flexibility of priority effects (colonization timing) by varying the timing of inoculum introduction (i.e., precolon...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-015-0588-5

    authors: Song Z,Vail A,Sadowsky MJ,Schilling JS

    更新日期:2015-05-01 00:00:00

  • Isolation ofNostoc muscorum cyanophages from a domestic sewage.

    abstract::TwoNostoc muscorum cyanophages were isolated from a domestic sewage in Kuwait. N-1L cyanophage had a hexagonal head with a long tail, while N-2S cyanophage was a short-tailed virus. N-1L cyanophage was active at 50°C and at acidic pH, compared with N-2S, which was more heat stable and active at pH 7.0. Seasonal variat...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/BF02025002

    authors: Sallal AK,Nimr ND,Al-Sharif HF

    更新日期:1987-05-01 00:00:00

  • Biotic disturbance, recolonization, and early succession of bacterial assemblages in intertidal sediments.

    abstract::The role of disturbance in structuring natural microbial communities has been largely unexplored. Disturbance associated with invertebrate ingestion can reduce bacterial biomass and alter metabolic activities and compositions of bacterial assemblages in marine sediments. The primary objectives of the research presente...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-003-1031-x

    authors: Plante CJ,Wilde SB

    更新日期:2004-08-01 00:00:00

  • Grazing of acidophilic bacteria by a flagellated protozoan.

    abstract::A biflagellated protozoan was isolated from an acidic drainage stream located inside a disused pyrite mine. The stream contained copious amounts of "acid streamer" bacterial growths, and the flagellate was observed in situ apparently grazing the streamer bacteria. The protozoan was obligately acidophilic, growing betw...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/BF00165908

    authors: McGinness S,Johnson DB

    更新日期:1992-01-01 00:00:00

  • The biogeography of ammonia-oxidizing bacterial communities in soil.

    abstract::Although ammonia-oxidizing bacteria (AOB) are likely to play a key role in the soil nitrogen cycle, we have only a limited understanding of how the diversity and composition of soil AOB communities change across ecosystem types. We examined 23 soils collected from across North America and used sequence-based analyses ...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-009-9517-9

    authors: Fierer N,Carney KM,Horner-Devine MC,Megonigal JP

    更新日期:2009-08-01 00:00:00

  • Fungal immigration dynamics and community development on apple leaves.

    abstract::Fungal immigration dynamics and community development were followed over time on sets of surface-disinfested apple leaves in the field. Immigration was defined as the arrival of viable propagules on the leaf surface. In three separate experiments (May, June, July), total numbers of fungal immigrants, numbers of filame...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/BF02011695

    authors: Kinkel LL,Andrews JH,Nordheim EV

    更新日期:1989-07-01 00:00:00

  • Isolation and genetic analysis of haloalkaliphilic bacteriophages in a North American Soda Lake.

    abstract::Mono Lake is a meromictic, hypersaline, soda lake that harbors a diverse and abundant microbial community. A previous report documented the high viral abundance in Mono Lake, and pulsed-field gel electrophoresis analysis of viral DNA from lake water samples showed a diverse population based on a broad range of viral g...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-006-9069-1

    authors: Sabet S,Chu W,Jiang SC

    更新日期:2006-05-01 00:00:00

  • Effects of a clay mineral on microbial predation and parasitism ofEscherichia coli.

    abstract::Montmorillonitic clay influences the biological control ofEscherichia coli in aquatic systems, the magnitude of the effects being dependent on the state of the clay and the type of host-antagonist interaction. The interaction ofBdellovibrio andE. coli was partially inhibited by the presence of montmorillonite. Because...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/BF02013272

    authors: Roper MM,Marshall KC

    更新日期:1977-12-01 00:00:00

  • Phyllosphere Metaproteomes of Trees from the Brazilian Atlantic Forest Show High Levels of Functional Redundancy.

    abstract::The phyllosphere of the Brazilian Atlantic Forest has been estimated to contain several million bacterial species that are associated with approximately 20000 plant species. Despite the high bacterial diversity in the phyllosphere, the function of these microorganisms and the mechanisms driving their community assembl...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-016-0878-6

    authors: Lambais MR,Barrera SE,Santos EC,Crowley DE,Jumpponen A

    更新日期:2017-01-01 00:00:00

  • Natural Variation in Physicochemical Profiles and Bacterial Communities Associated with Aedes aegypti Breeding Sites and Larvae on Guadeloupe and French Guiana.

    abstract::Aedes aegypti develop in aquatic habitats in which mosquito larvae are exposed to physicochemical elements and microorganisms that may influence their life cycle and their ability to transmit arboviruses. Little is known about the natural bacterial communities associated with A. aegypti or their relation to the biotic...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-020-01544-3

    authors: Hery L,Guidez A,Durand AA,Delannay C,Normandeau-Guimond J,Reynaud Y,Issaly J,Goindin D,Legrave G,Gustave J,Raffestin S,Breurec S,Constant P,Dusfour I,Guertin C,Vega-Rúa A

    更新日期:2021-01-01 00:00:00

  • Environmental Drivers of Microbial Functioning in Mediterranean Forest Soils.

    abstract::Mediterranean forests own distinct characteristics resulting from climate, soil, and vegetation that affect soil microbial communities' assembly and their associated functions. We initiated a multi-scalar analysis of environmental drivers of soil functioning to (1) identify pertinent factorial scales and (2) determine...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-020-01518-5

    authors: Brunel C,Da Silva AF,Gros R

    更新日期:2020-10-01 00:00:00

  • Host selectivity and genetic variation of Discula umbrinella isolates from two oak species: analyses of intergenic spacer region sequences of ribosomal DNA.

    abstract::Discula umbrinella, a fungal endophyte of oak species, colonizes and reproduces on leaves of Quercus alba and Q. rubra in forest ecosystems. Twenty-nine isolates collected from leaves of both oak species (16 from Q. alba and 13 from Q. rubra) were assayed for oak species preference and genetic variation based on prime...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-006-9073-5

    authors: Cohen SD

    更新日期:2006-10-01 00:00:00

  • Simultaneous growth on citrate reduces the effects of iron limitation during toluene degradation in Pseudomonas.

    abstract::Rhizoremediation has been suggested as an attractive bioremediation strategy for the effective breakdown of pollutants in soil. The presence of plant root exudates such as organic acids, sugars, and amino acids that may serve as carbon sources or biosynthetic building blocks and the limited bioavailability of iron may...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-002-2023-y

    authors: Dinkla IJ,Janssen DB

    更新日期:2003-01-01 00:00:00

  • The ecology of the yeast flora in necroticOpuntia cacti and of associatedDrosophila in Australia.

    abstract::A survey was made of the yeast communities isolated from necrotic tissue of 4 species of prickly-pear cacti (Opuntia stricta, O. tomentosa, O. monacantha, andO. streptacantha) which have colonized in Australia. Yeast communities were sampled from a number of localities and at different times. Cactus specific yeasts ac...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/BF02015562

    authors: Barker JS,East PD,Phaff HJ,Miranda M

    更新日期:1984-12-01 00:00:00

  • Application of a novel rpoC1-RFLP approach reveals that marine Prochlorococcus populations in the Atlantic gyres are composed of greater microdiversity than previously described.

    abstract::To elucidate the degree of microdiversity within the genus Prochlorococcus, novel Prochlorococcus-specific polymerase chain reaction (PCR) primers were developed for the rpoC1 gene, which encodes the ribonucleic acid (RNA) polymerase core subunit. The size of the PCR fragment (925 bp) coupled with high sequence variat...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-007-9259-5

    authors: Jameson E,Joint I,Mann NH,Mühling M

    更新日期:2008-01-01 00:00:00

  • Land use intensity controls actinobacterial community structure.

    abstract::Actinobacteria are major producers of secondary metabolites; however, it is unclear how they are distributed in the environment. DNA was extracted from forest, pasture and cultivated soils, street sediments (dust and material in place), and sediments affected by animal activity (e.g. guano, vermicompost) and character...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-010-9752-0

    authors: Hill P,Krištůfek V,Dijkhuizen L,Boddy C,Kroetsch D,van Elsas JD

    更新日期:2011-02-01 00:00:00

  • A study of the occurrence and distribution of bdellovibrios in estuarine sediment over an annual cycle.

    abstract::The recovery of bdellovibrios from estuarine sediments over an annual cycle was studied. Greater numbers of the predators were recovered in sediment than in the water column. Increases in the number of bdellovibrios recovered from sediment over various periods of time suggest that multiplication of the predators occur...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/BF02012949

    authors: Williams HN

    更新日期:1988-01-01 00:00:00

  • Ecology of stem-nodulating Rhizobium and Azorhizobium in four vegetation zones of Senegal.

    abstract::The occurrence and distribution of Azorhizobium and Rhizobium strains that induce stem nodulation of Sesbania rostrata were determined in four vegetation zones in Senegal. Based on tests with 16 Rhizobium and 10 Azorhizobium strains nodulating S. rostrata, a method was devised to distinguish among the strains. In all ...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/BF00217424

    authors: Robertson BK,Dreyfus B,Alexander M

    更新日期:1995-01-01 00:00:00

  • Effects of grazer presence on genetic structure of a phenotypically diverse diatom population.

    abstract::Studies of predator-prey systems in both aquatic and terrestrial environments have shown that grazers structure the intraspecific diversity of prey species, given that the prey populations are phenotypically variable. Populations of phytoplankton have traditionally considered comprising only low intraspecific variatio...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-013-0327-8

    authors: Sjöqvist C,Kremp A,Lindehoff E,Båmstedt U,Egardt J,Gross S,Jönsson M,Larsson H,Pohnert G,Richter H,Selander E,Godhe A

    更新日期:2014-01-01 00:00:00

  • Penicillium mycobiota in arctic subglacial ice.

    abstract::Fungi have been only rarely isolated from glacial ice in extremely cold polar regions and were in these cases considered as random, long-term preserved Aeolian deposits. Fungal presence has so far not been investigated in polar subglacial ice, a recently discovered extreme habitat reported to be inhabited exclusively ...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-006-9086-0

    authors: Sonjak S,Frisvad JC,Gunde-Cimerman N

    更新日期:2006-08-01 00:00:00

  • Dynamic interactions ofPseudomonas aeruginosa and bacteriophages in lake water.

    abstract::The persistence and interaction between newly isolated strains ofPseudomonas aeruginosa and resident bacteriophages indigenous to a freshwater environment was monitored over 45 days in lake water microcosms. The interaction between susceptible and resistant bacteria with pure phage (UT1) particles or a mixed phage pop...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/BF02012098

    authors: Ogunseitan OA,Sayler GS,Miller RV

    更新日期:1990-03-01 00:00:00

  • Estuarine microbial food web patterns in a Lake Erie coastal wetland.

    abstract::Composition and distribution of planktonic protists were examined relative to microbial food web dynamics (growth, grazing, and nitrogen cycling rates) at the Old Woman Creek (OWC) National Estuarine Research Reserve during an episodic storm event in July 2003. More than 150 protistan taxa were identified based on mor...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-004-0250-0

    authors: Lavrentyev PJ,McCarthy MJ,Klarer DM,Jochem F,Gardner WS

    更新日期:2004-11-01 00:00:00

  • PAH degradation capacity of soil microbial communities--does it depend on PAH exposure?

    abstract::Polycyclic aromatic hydrocarbons (PAHs) are ubiquitous pollutants of the environment. But is their microbial degradation equally wide in distribution? We estimated the PAH degradation capacity of 13 soils ranging from pristine locations (total PAHs approximately 0.1 mg kg(-1)) to heavily polluted industrial sites (tot...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-005-0022-5

    authors: Johnsen AR,Karlson U

    更新日期:2005-11-01 00:00:00

  • The ecology of testate amoebae (Protists) in sphagnum in North-western Poland in relation to peatland ecology.

    abstract::We studied the relationship between testate amoebae (Protozoa) communities and the depth to the water table (DWT), pH, conductivity, and microhabitat type in Sphagnum dominated peatlands of north-western Poland and built predictive (transfer function) models for inferring DWT and pH based on the testate amoebae commun...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-004-0105-8

    authors: Lamentowicz M,Mitchell EA

    更新日期:2005-07-01 00:00:00

  • Potential rates of nitrification and denitrification in an oligotrophic freshwater sediment system.

    abstract::Potential rates of nitrification and denitrification were measured in an oligotrophic sediment system. Nitrification potential was estimated using the CO oxidation technique, and potential denitrification was measured by the acetylene blockage technique. The sediments demonstrated both nitrifying and denitrifying acti...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/BF02011574

    authors: Dodds WK,Jones RD

    更新日期:1987-07-01 00:00:00

  • Bacterial activity at the air/water interface.

    abstract::By using substrate molecules of varying degrees of surface activity, we were able to measure some features of bacterial activity in the surface microlayers (SM) and in the subsurface (bulk) water. The fraction of active cells was determined by a combined microautoradiography-epifluorescence (ME) method. Measurements w...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/BF02019021

    authors: Hermansson M,Dahlbäck B

    更新日期:1983-12-01 00:00:00

  • Chlorobenzoate-degrading bacteria in similar pristine soils exhibit different community structures and population dynamics in response to anthropogenic 2-, 3-, and 4-chlorobenzoate levels.

    abstract::A study was conducted to determine the diversity of 2-, 3-, and 4-chlorobenzoate (CB) degraders in two pristine soils with similar physical and chemical characteristics. Surface soils were collected from forested sites and amended with 500 microg of 2-, 3-, or 4-CB g(-1) soil. The CB levels and degrader numbers were m...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-003-1048-1

    authors: Gentry TJ,Wang G,Rensing C,Pepper IL

    更新日期:2004-07-01 00:00:00

  • Shifts in microbial community composition following surface application of dredged river sediments.

    abstract::Sediment input to the Illinois River has drastically decreased river depth and reduced habitats for aquatic organisms. Dredging is being used to remove sediment from the Illinois River, and the dredged sediment is being applied to the surface of a brownfield site in Chicago with the goal of revegetating the site. In o...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-008-9410-y

    authors: Baniulyte D,Favila E,Kelly JJ

    更新日期:2009-01-01 00:00:00

  • Ciliate Diversity From Aquatic Environments in the Brazilian Atlantic Forest as Revealed by High-Throughput DNA Sequencing.

    abstract::Rainforest aquatic ecosystems include complex habitats with scarce information on their unicellular eukaryote diversity and community structure. We have investigated the diversity of ciliates in freshwater and brackish environments along the Brazilian Atlantic Forest, based on the hypervariable V4 region of the 18S-rD...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s00248-020-01612-8

    authors: Fernandes NM,Campello-Nunes PH,Paiva TS,Soares CAG,Silva-Neto ID

    更新日期:2020-10-06 00:00:00

  • Effects of Agricultural Chemicals on DNA Sequence Diversity of Soil Microbial Community: A Study with RAPD Marker.

    abstract::The DNA sequence diversities for microbial communities in four soils affected by agricultural chemicals (mainly triadimefon and ammonium bicarbonate and their intermediates) were evaluated by Random Amplified Polymorphic DNA (RAPD) analysis. Fourteen random primers were used to amplify RAPDs from four soil microbial c...

    journal_title:Microbial ecology

    pub_type: 杂志文章

    doi:10.1007/s002489900180

    authors: Yang Y,Yao J,Hu S,Qi Y

    更新日期:2000-01-01 00:00:00