Abstract:
:We have updated the Protein Sequence-Structure Analysis Relational Database (PSSARD) first published in the Int. J. Biol. Macromol. 36 (2005) 259-262 corresponding to 1573 representative protein chains selected from the Protein Data Bank (PDB). In this, the updated and revised PSSARD (Version 2.0), we have included all proteins in the Protein Data Bank available at the time of developing this database including the NMR PDB entries. The current database corresponds to 22,752 XRAY PDB entries and 3977 NMR PDB entries and is separated accordingly in order to facilitate the appropriate database search. The representative protein chains can also be separately accessed within the current database. We have made a provision to combine more than one field to query the database and the results of any search can be used to carry out further nested searches using a combination of queries. We have provided hyperlinks to the individual PDB entries obtained as the result of any search in PSSARD in order to obtain additional details relevant to the protein structure. Certain applications useful to identify domains and structural motifs are discussed.
journal_name
Int J Biol Macromoljournal_title
International journal of biological macromoleculesauthors
Sridhar S,Babu AV,Guruprasad Kdoi
10.1016/j.ijbiomac.2006.10.006subject
Has Abstractpub_date
2007-06-01 00:00:00pages
109-13issue
1eissn
0141-8130issn
1879-0003pii
S0141-8130(06)00307-2journal_volume
41pub_type
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journal_title:International journal of biological macromolecules
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journal_title:International journal of biological macromolecules
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journal_title:International journal of biological macromolecules
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journal_title:International journal of biological macromolecules
pub_type: 杂志文章
doi:10.1016/j.ijbiomac.2010.04.003
更新日期:2010-07-01 00:00:00
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journal_title:International journal of biological macromolecules
pub_type: 杂志文章
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更新日期:2005-12-30 00:00:00
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journal_title:International journal of biological macromolecules
pub_type: 杂志文章
doi:10.1016/j.ijbiomac.2019.11.185
更新日期:2020-08-01 00:00:00
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journal_title:International journal of biological macromolecules
pub_type: 杂志文章
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更新日期:2018-02-01 00:00:00
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journal_title:International journal of biological macromolecules
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更新日期:2020-01-15 00:00:00
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journal_title:International journal of biological macromolecules
pub_type: 杂志文章
doi:10.1016/j.ijbiomac.2020.05.045
更新日期:2020-09-15 00:00:00
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journal_title:International journal of biological macromolecules
pub_type: 杂志文章
doi:10.1016/j.ijbiomac.2017.09.088
更新日期:2018-02-01 00:00:00
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journal_title:International journal of biological macromolecules
pub_type: 杂志文章
doi:10.1016/j.ijbiomac.2020.01.287
更新日期:2020-05-15 00:00:00
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journal_title:International journal of biological macromolecules
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更新日期:2020-10-01 00:00:00
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journal_title:International journal of biological macromolecules
pub_type: 杂志文章
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更新日期:2021-01-31 00:00:00
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journal_title:International journal of biological macromolecules
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doi:10.1016/0141-8130(94)90017-5
更新日期:1994-04-01 00:00:00
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journal_title:International journal of biological macromolecules
pub_type: 杂志文章
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journal_title:International journal of biological macromolecules
pub_type: 杂志文章
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更新日期:2008-08-15 00:00:00
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journal_title:International journal of biological macromolecules
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更新日期:2020-11-01 00:00:00
abstract::Sucrose phosphorylase (SPase, EC2.4.1.7) is a promising transglycosylation biocatalyst used for producing glycosylated compounds that are widely used in the food, cosmetics, and pharmaceutical industries. In this study, a recombinant SPase from the Thermobacillus sp. ZCTH02-B1 (rTSPase), which was previously reported ...
journal_title:International journal of biological macromolecules
pub_type: 杂志文章
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更新日期:2021-01-19 00:00:00
abstract::To study the properties and structure of aquatic silk, nest-spinning hydropsychid caddisfly (Stenopsyche marmorata) larva were collected from a Japanese river and the silk glands were removed from the larva by dissecting and dried on the glass plate at room temperature. The silk fibers were obtained by removing fibrou...
journal_title:International journal of biological macromolecules
pub_type: 杂志文章
doi:10.1016/j.ijbiomac.2009.10.003
更新日期:2010-01-01 00:00:00
abstract::With the increasing demand for simple, efficient, environmentally friendly preparation methods to produce cellulose nanofibers for reinforcing a biodegradable film is increased, the role of nanofibers from the pure cellulose produced by bacteria becomes more important. This work characterized bacterial cellulose nanof...
journal_title:International journal of biological macromolecules
pub_type: 杂志文章
doi:10.1016/j.ijbiomac.2019.05.178
更新日期:2019-08-15 00:00:00
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journal_title:International journal of biological macromolecules
pub_type: 杂志文章
doi:10.1016/j.ijbiomac.2020.05.037
更新日期:2020-09-15 00:00:00
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journal_title:International journal of biological macromolecules
pub_type: 杂志文章
doi:10.1016/j.ijbiomac.2019.05.169
更新日期:2019-08-15 00:00:00
abstract::The inferior thermal- stability of collagen hinders its extensive application in food industry, including edible packaging. To improve the thermal- stability and mechanical properties of collagen, we attempted to crosslink collagen with some proteins possessing excellent thermal stability (i. e., casein, keratin and s...
journal_title:International journal of biological macromolecules
pub_type: 杂志文章
doi:10.1016/j.ijbiomac.2017.01.127
更新日期:2017-05-01 00:00:00
abstract::Water represents a common denominator for liquid-liquid phase transitions leading to the formation of the polymer-based aqueous two-phase systems (ATPSs) and a set of the proteinaceous membrane-less organelles (PMLOs). ATPSs have a broad range of biotechnological applications, whereas PMLOs play a number of crucial ro...
journal_title:International journal of biological macromolecules
pub_type: 杂志文章,评审
doi:10.1016/j.ijbiomac.2018.06.030
更新日期:2018-10-01 00:00:00
abstract::Overconsumption of fat-rich foods has caused increasing incidences of human chronic diseases. Thus, it is promising to fabricate reduced-fat foods, but the reduction in fat content often causes undesired textural changes in foods. In this study, we showed a facile method to structure oil-in-water emulsions via the ele...
journal_title:International journal of biological macromolecules
pub_type: 杂志文章
doi:10.1016/j.ijbiomac.2020.01.106
更新日期:2020-03-15 00:00:00