CYP2A6 polymorphism reveals differences in Japan and the existence of a specific variant in Ovambo and Turk populations.

Abstract:

:CYP2A6 is a polymorphic enzyme, and CYP2A6 genotype has been shown to be associated with smoking habits and lung cancer. We investigated CYP2A6 polymorphism in Japanese from four different geographic areas of Japan and in the Ovambo and Turk populations. Using two polymerase chain reaction restriction fragment length polymorphisms (PCR-RFLPs), we identified the functionally important variants of CYP2A6: *1A, *1B, *1F, *1G, *4A, and *4D. In the Japanese population the highest frequencies of the CYP2A6*1A allele were observed in subjects from the Fukuoka (Kyushu Island) and Ehime (Shikoku Island) prefectures, whereas subjects in Shimane and Tottori (both located on the Japan Sea side of Honshu Island) showed the highest frequencies of the CYP2A6*1B allele. In the Tottori and Shimane groups no subject was homozygous for the CYP2A6*4A allele, a whole gene deletion type that is prevalent among Asians. In the Ovambo and Turk populations the CYP2A6*1A allele was predominant. Furthermore, two alleles undetected in the Japanese were observed in these latter two ethnic groups: CYP2A6*1G was found solely in the Ovambos, and CYP2A6*1F was found solely in the Turks. The present study is the first to show interprefecture differences in CYP2A6 polymorphism in Japanese who live in relatively close but distinct geographic areas; this is also the first study to evaluate CYP2A6 variations among these Japanese and the Ovambo and Turk populations. The distribution results of these alleles could help to define the true significance of CYP2A6 polymorphism as a genetic susceptibility marker in worldwide populations.

journal_name

Hum Biol

journal_title

Human biology

authors

Takeshita H,Hieda Y,Fujihara J,Xue Y,Nakagami N,Takayama K,Imamura S,Kataoka K

doi

10.1353/hub.2006.0037

subject

Has Abstract

pub_date

2006-04-01 00:00:00

pages

235-42

issue

2

eissn

0018-7143

issn

1534-6617

journal_volume

78

pub_type

杂志文章
  • Differential sex mortality in a rural nineteenth-century population: Escazu, Costa Rica.

    abstract::Cross-cultural studies of sex-specific mortality indicate that, whereas males experience their greatest mortality in industrialized societies, females experience their greatest mortality in populations with low life expectancy. The higher mortality of females in low-life-expectancy communities has been interpreted as ...

    journal_title:Human biology

    pub_type: 历史文章,杂志文章

    doi:

    authors: Madrigal L

    更新日期:1992-04-01 00:00:00

  • Time series analysis of the epidemiological transition in Minorca, 1634-1997.

    abstract::Autoregressive integrated moving average (ARIMA) models provide a powerful tool for detecting seasonal patterns in mortality statistics. The strength of ARIMA models lies in their ability to reveal complex structures of temporal interdependence in time series. Moreover, changes in model parameters provide an empirical...

    journal_title:Human biology

    pub_type: 历史文章,杂志文章

    doi:10.1353/hub.2007.0006

    authors: Muñoz-Tudurí M,García-Moro C,Walker PL

    更新日期:2006-10-01 00:00:00

  • Reproductive measures, fitness, and migrating Mennonites: an evolutionary analysis.

    abstract::Given the same reproductive span, more children with shorter interbirth intervals and less parental attention per child should not do as well. There should be intermediate optima in family sizes, but only two studies have demonstrated optima. The goal here is to determine whether the relationship between fitness and f...

    journal_title:Human biology

    pub_type: 历史文章,杂志文章

    doi:10.1353/hub.2005.0010

    authors: Stevenson JC,Everson PM,Grimes M

    更新日期:2004-10-01 00:00:00

  • Mortality in a migrating Mennonite church congregation.

    abstract::Preston's two-census method of demographic estimation is applied to three pairs of reconstructed censuses from the records of a migrating Mennonite church congregation covering the period 1780-1890. The three pairs of censuses correspond to three periods (1780-1790, 1850-1860, and 1880-1890) and to stays in three sett...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:

    authors: Everson PM,Stevenson JC,Rogers L

    更新日期:1995-02-01 00:00:00

  • Polymorphism in the upstream regulatory region of the HLA-DQB1 gene in liver graft recipients.

    abstract::HLA-DQB1*0302 allele frequency is increased in liver graft recipients with acute rejection. We investigated polymorphism in the upstream regulatory regions (URRs) of the DQB1 gene to determine whether polymorphism in the DQB1 promoter region influences liver graft acceptance. A combination of typing protocols based on...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:10.1353/hub.2001.0088

    authors: Muro M,Herrero N,Marin L,Torío A,Minguela A,Sánchez-Bueno F,García-Alonso AM,Alvarez-López MR

    更新日期:2001-12-01 00:00:00

  • Diversity of two short tandem repeat loci (CD4 and F13A1) in three Brazilian ethnic groups.

    abstract::Two microsatellites (CD4 and F13A1) were investigated in seven Brazilian populations: one group each of European- and African-derived subjects from Porto Alegre, southern Brazil, and five Amerindian tribes (three Tupi-Mondé speaking [Gavião, Surui, and Zoró], one Macro-Gê [Xavante], and one Carib [Wai-Wai]). For both ...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:

    authors: Bogdawa HM,Hutz MH,Salzano FM,Weimer TA

    更新日期:2000-12-01 00:00:00

  • Origin and population structure of the Icelanders.

    abstract::The Norse and Celtic contributions to the founding population of Iceland have been estimated previously on a pan-Icelandic basis using gene frequency data for the entire island. Accounts of the settlement of Iceland, however, suggest that different regions received different proportions of Norse and Celtic settlers, i...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:

    authors: Williams JT

    更新日期:1993-04-01 00:00:00

  • Introgression Makes Waves in Inferred Histories of Effective Population Size.

    abstract::Human populations have a complex history of introgression and of changing population size. Human genetic variation has been affected by both these processes, so inference of past population size depends upon the pattern of gene flow and introgression among past populations. One remarkable aspect of human population hi...

    journal_title:Human biology

    pub_type: 历史文章,杂志文章

    doi:10.13110/humanbiology.89.1.04

    authors: Hawks J

    更新日期:2017-01-01 00:00:00

  • Temporal variation in phenetic affinity of early Upper Egyptian male cranial series.

    abstract::We carried out an exploratory historical biology study using temporally distinguished groups of predynastic-Early Dynastic male crania from the region of Upper Egypt. The objectives were, first, to determine the overall pattern of phenetic affinity between temporally sequential series and in relation to the earliest s...

    journal_title:Human biology

    pub_type: 历史文章,杂志文章

    doi:10.3378/1534-6617(2008)80[141:TVIPAO]2.0.CO;2

    authors: Keita SO,Boyce AJ

    更新日期:2008-04-01 00:00:00

  • Method of path coefficients: a trademark of Sewall Wright.

    abstract::This address is a tribute to a pioneer of population genetics, including human population genetics. The unique methodology employed by Sewall Wright in many genetic problems is the method of path coefficients. This essay traces the historical landmarks in the development of the path method and then shows how some of t...

    journal_title:Human biology

    pub_type: 历史文章,杂志文章

    doi:

    authors: Li CC

    更新日期:1991-02-01 00:00:00

  • The temporal dynamics of the fourteenth-century Black Death: new evidence from English ecclesiastical records.

    abstract::Recent research has questioned whether the European Black Death of 1347-1351 could possibly have been caused by the bubonic plague bacillus Yersinia pestis, as has been assumed for over a century. Central to the arguments both for and against involvement of Y. pestis has been a comparison of the temporal dynamics obse...

    journal_title:Human biology

    pub_type: 传,历史文章,杂志文章

    doi:10.1353/hub.2003.0067

    authors: Wood JW,Ferrell RJ,Dewitte-Aviña SN

    更新日期:2003-08-01 00:00:00

  • Novel mitochondrial DNA insertion polymorphism and its usefulness for human population studies.

    abstract::The frequency of a polymorphic mitochondrial DNA insertion into the nuclear genome was determined for 870 individuals from a geographically diverse set of 20 populations. The mtDNA insertion frequency varies significantly among populations, having a large GST value (0.178) and high heterozygosity values within populat...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:

    authors: Thomas R,Zischler H,Pääbo S,Stoneking M

    更新日期:1996-12-01 00:00:00

  • Integration versus apartheid in post-Roman Britain: a response to Thomas et Al. (2008).

    abstract::The genetic surveys of the population of Britain conducted by Weale et al. and Capelli et al. produced estimates of the Germani immigration into Britain during the early Anglo-Saxon period, c.430-c.730. These estimates are considerably higher than the estimates of archaeologists. A possible explanation suggests that a...

    journal_title:Human biology

    pub_type: 历史文章,杂志文章

    doi:10.3378/027.083.0604

    authors: Pattison JE

    更新日期:2011-12-01 00:00:00

  • Seasonality in birth weight: review of global patterns and potential causes.

    abstract::Birth weight is the single most significant determinant of infant mortality and the chances of a newborn to experience healthy development. Low birth weight also appears to be related to higher risks of several important chronic conditions, such as ischemic heart disease, non-insulin-dependent diabetes, and cancer in ...

    journal_title:Human biology

    pub_type: 杂志文章,评审

    doi:10.3378/027.081.0405

    authors: Chodick G,Flash S,Deoitch Y,Shalev V

    更新日期:2009-08-01 00:00:00

  • Determinants of birth interval in a rural Mediterranean population (La Alpujarra, Spain).

    abstract::The fertility pattern, in terms of birth intervals, in a rural population not practicing contraception belonging to La Alta Alpujarra Oriental (southeast Spain) is analyzed. During the first half of the 20th century, this population experienced a considerable degree of geographical and cultural isolation. Because of t...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:

    authors: Polo V,Luna F,Fuster V

    更新日期:2000-10-01 00:00:00

  • Authenticating ancient human mitochondrial DNA.

    abstract::The use of ancient DNA techniques in human studies has been hampered by problems of contamination with modern human DNA. The main problem has been that the object of study belongs to the same species as the observer, and the complete elimination of the contamination risk is seemingly unlikely. Contamination has even b...

    journal_title:Human biology

    pub_type: 历史文章,杂志文章

    doi:10.1353/hub.2001.0069

    authors: Montiel R,Malgosa A,Francalacci P

    更新日期:2001-10-01 00:00:00

  • "Small size" in the Philippine human fossil record: is it meaningful for a better understanding of the evolutionary history of the negritos?

    abstract::"Pygmy populations" are recognized in several places over the world, especially in Western Africa and in Southeast Asia (Philippine "negritos," for instance). Broadly defined as "small-bodied Homo sapiens" (compared with neighboring populations), their origins and the nature of the processes involved in the maintenanc...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:10.3378/027.085.0303

    authors: Détroit F,Corny J,Dizon EZ,Mijares AS

    更新日期:2013-02-01 00:00:00

  • Genetic Differentiation in a Sample from Northern Mexico City Detected by HLA System Analysis: Impact in the Study of Population Immunogenetics.

    abstract::The major histocompatibility complex is directly involved in the immune response, and thus the genes coding for its proteins are useful markers for the study of genetic diversity, susceptibility to disease (autoimmunity and infections), transplant medicine, and pharmacogenetics, among others. The polymorphism of the s...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:10.13110/humanbiology.89.3.02

    authors: Cortés EDJ,Sieck MAC,Perea AJA,Medrano RMM,Jaime AB,Martínez PE,Zúñiga J,Alonzo VA,Granados J,Barquera R

    更新日期:2017-07-01 00:00:00

  • Deciduous dentition of a Late Archaic population of Ohio.

    abstract::I describe the developmental, metric, morphologic, and pathologic features of deciduous dentition in a terminal Late Archaic (c. 3000 B.P.) Native American population in Ohio. Development of deciduous dentition in this Late Archaic population is stable with little sequence variation. The pattern of development (ldc, l...

    journal_title:Human biology

    pub_type: 历史文章,杂志文章

    doi:

    authors: Sciulli PW

    更新日期:1990-04-01 00:00:00

  • Autosomal STR variation in five Austronesian populations.

    abstract::Human population characteristics at the genetic level are integral to both forensic biology and population genetics. This study evaluates biparental microsatellite markers in five Austronesian-speaking groups to characterize their intra- and interpopulation differences. Genetic diversity was analyzed using 15 short ta...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:10.1353/hub.2006.0019

    authors: Shepard EM,Chow RA,Suafo'a E,Addison D,Pérez-Miranda AM,Garcia-Bertrand RL,Herrera RJ

    更新日期:2005-12-01 00:00:00

  • Mitochondrial DNA polymorphism in northern Greece.

    abstract::The polymorphism of human mitochondrial DNA (mtDNA) was studied in 118 unrelated Greeks (from northern Greece) using total blood cell DNA and the restriction enzymes HpaI, BamHI, HaeII, MspI, AvaII, and HincII. One new morph was identified for MspI (named MspI morph 18Gr) and is the result of a mutation in a previousl...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:

    authors: Astrinidis A,Kouvatsi A

    更新日期:1994-08-01 00:00:00

  • Shape variability and classification of human hair: a worldwide approach.

    abstract::Human hair has been commonly classified according to three conventional ethnic human subgroups, that is, African, Asian, and European. Such broad classification hardly accounts for the high complexity of human biological diversity, resulting from both multiple and past or recent mixed origins. The research reported he...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:10.1353/hub.2007.0045

    authors: De la Mettrie R,Saint-Léger D,Loussouarn G,Garcel A,Porter C,Langaney A

    更新日期:2007-06-01 00:00:00

  • Genetic epidemiology of colon cancer in the cotton-top tamarin (Saguinus oedipus).

    abstract::Colon cancer is known to be heritable in humans, but the opportunity to investigate the genetic epidemiology of cancer in nonhuman primates has been limited by the size of available populations. The cotton-top tamarin (Saguinus oedipus) colony at the Oak Ridge Associated Universities (ORAU) Marmoset Research Center is...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:

    authors: Cheverud JM,Tardif S,Henke MA,Clapp NK

    更新日期:1993-12-01 00:00:00

  • Apolipoprotein E and H polymorphisms in Mongolian Buryat: allele frequencies and relationship with plasma lipid levels.

    abstract::A Buryat population consisting of seven tribal groups in eastern Mongolia has been screened to determine the frequency distribution of different apolipoprotein E and H alleles (APOE and APOH, genes) coding for common isoforms and their association with quantitative plasma lipid levels. Allele frequencies at the APOE l...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:10.1353/hub.2002.0058

    authors: Tsunoda K,Harihara S,Dashnyam B,Semjidmaa D,Yamaguchi Y,Tanabe Y,Sakai N,Sato A,Sato K

    更新日期:2002-10-01 00:00:00

  • MtDNA haplogroup analysis of black Brazilian and sub-Saharan populations: implications for the Atlantic slave trade.

    abstract::Seventy individuals from two African and four black Brazilian populations were studied for the first hypervariable segment of mtDNA. To delineate a more complete phylogeographic scenario of the African mtDNA haplogroups in Brazil and to provide additional information on the nature of the Atlantic slave trade, we analy...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:10.1353/hub.2006.0028

    authors: Silva WA,Bortolini MC,Schneider MP,Marrero A,Elion J,Krishnamoorthy R,Zago MA

    更新日期:2006-02-01 00:00:00

  • Haplotype analysis of the apolipoprotein E and apolipoprotein C1 loci in Portugal and São Tomé e Príncipe (Gulf of Guinea): linkage disequilibrium evidence that APOE*4 is the ancestral APOE allele.

    abstract::The joint distributions of phenotypes from the apolipoprotein E gene (APOE) and from a closely linked restriction site polymorphism at the apolipoprotein C1 locus (APOC1) were studied in population samples from Portugal and São Tomé e Príncipe (Gulf of Guinea), a former Portuguese colony that was originally populated ...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:

    authors: Seixas S,Trovoada MJ,Rocha J

    更新日期:1999-12-01 00:00:00

  • Autosomal STR analyses in native Amazonian tribes suggest a population structure driven by isolation by distance.

    abstract::Eleven short tandem repeat loci (CSF1PO, D3S1358, D5S818, D7S820, D8S1179, D13S317, D16S539, D18S51, D21S11, TH01, and TPOX) were investigated in 232 individuals from 6 Amazonian native tribes (Tiriyó, Waiãpi, Zoé, Urubu-Kaapor, Awa-Guajá, and Parakanã). We added the new data to a database that included five previousl...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:10.3378/027.081.0106

    authors: Dos Santos SE,Ribeiro-Rodrigues EM,Ribeiro-Dos-Santos AK,Hutz MH,Tovo-Rodrigues L,Salzano FM,Callegari-Jacques SM

    更新日期:2009-02-01 00:00:00

  • The family name as socio-cultural feature and genetic metaphor: from concepts to methods.

    abstract::A recent workshop entitled "The Family Name as Socio-Cultural Feature and Genetic Metaphor: From Concepts to Methods" was held in Paris in December 2010, sponsored by the French National Centre for Scientific Research (CNRS) and by the journal Human Biology. This workshop was intended to foster a debate on questions r...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:10.3378/027.084.0205

    authors: Darlu P,Bloothooft G,Boattini A,Brouwer L,Brouwer M,Brunet G,Chareille P,Cheshire J,Coates R,Dräger K,Desjardins B,Hanks P,Longley P,Mandemakers K,Mateos P,Pettener D,Useli A,Manni F

    更新日期:2012-04-01 00:00:00

  • Genetic structure of Mennonite populations of Kansas and Nebraska.

    abstract::We describe the gene frequency distributions for 29 different blood group, serum, and erythrocytic proteins for three Mennonite communities from Kansas and Nebraska and compare their gene frequencies with those of Amish, Hutterite, and Mennonite populations using the topological method of Harpending and Jenkins (1973)...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:

    authors: Crawford MH,Dykes DD,Polesky HF

    更新日期:1989-08-01 00:00:00

  • Blood pressure profile of Lepchas of the Sikkim Himalayas: epidemiological study.

    abstract::We evaluate the blood pressure profile in relation to selected biological, behavioral, and socioeconomic factors among the Lepchas, a tribal population of Asian origin inhabiting the Dzongu area of northern Sikkim. The results show that mean systolic and diastolic blood pressures of Lepcha adults (aged 19 years and ol...

    journal_title:Human biology

    pub_type: 杂志文章

    doi:

    authors: Mukhopadhyay B,Mukhopadhyay S,Majumder PP

    更新日期:1996-02-01 00:00:00