Satellite tobacco ringspot virus RNA: A subset of the RNA sequence is sufficient for autolytic processing.

Abstract:

:The satellite RNA of tobacco ringspot virus depends upon tobacco ringspot virus for its replication and source of coat protein. The satellite RNA reduces virus accumulation and the severity of virus-induced symptoms. Repetitive sequence, dimeric, and higher forms of the satellite RNA are known to autolytically process to form biologically active monomeric RNA of 359 nucleotide residues [Prody, G. A., Bakos, J. T., Buzayan, J. M., Schneider, I. R. & Bruening, G. (1986) Science 231, 1577-1580], with a 5'-hydroxyl and a 2',3'-cyclic phosphodiester as the new terminal groups. We show here that transcripts of full-length and truncated DNA clones of the satellite RNA sequence also process in a nonenzymic reaction. One such transcript was an RNA that has about one-fourth of the satellite RNA sequence, representing the 3'-terminal and 5'-terminal portions of monomeric RNA joined in the junction that is cleaved in dimeric RNA. This RNA autolytically processed more efficiently than molecules with a larger proportion of the satellite RNA nucleotide sequence.

authors

Buzayan JM,Gerlach WL,Bruening G

doi

10.1073/pnas.83.23.8859

subject

Has Abstract

pub_date

1986-12-01 00:00:00

pages

8859-62

issue

23

eissn

0027-8424

issn

1091-6490

journal_volume

83

pub_type

杂志文章
  • Microbial production of ammonium ion from nitrogen.

    abstract::Genetic manipulation of nitrogenase and key glutamate-forming enzymes can provide mutants that excrete fixed N2 as NH4+. A derepressed N2 fxation mutant (SK-24) has been isolated , which excretes up to 20.2 mumol of fixed N2 as NH4+ per mg of cell protein in 24 hr at room temperature. Biochemical analysis shows that t...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.72.1.136

    authors: Shanmugam KT,Valentine RC

    更新日期:1975-01-01 00:00:00

  • Delta-like ligand 4 (Dll4) is induced by VEGF as a negative regulator of angiogenic sprouting.

    abstract::Genetic deletion studies have shown that haploinsufficiency of Delta-like ligand (Dll) 4, a transmembrane ligand for the Notch family of receptors, results in major vascular defects and embryonic lethality. To better define the role of Dll4 during vascular growth and differentiation, we selected the postnatal retina a...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0611206104

    authors: Lobov IB,Renard RA,Papadopoulos N,Gale NW,Thurston G,Yancopoulos GD,Wiegand SJ

    更新日期:2007-02-27 00:00:00

  • Interactive effects of age and estrogen on cognition and pyramidal neurons in monkey prefrontal cortex.

    abstract::We previously reported that long-term cyclic estrogen (E) treatment reverses age-related impairment of cognitive function mediated by the dorsolateral prefrontal cortex (dlPFC) in ovariectomized (OVX) female rhesus monkeys, and that E induces a corresponding increase in spine density in layer III dlPFC pyramidal neuro...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0704757104

    authors: Hao J,Rapp PR,Janssen WG,Lou W,Lasley BL,Hof PR,Morrison JH

    更新日期:2007-07-03 00:00:00

  • Stem cells are dispensable for lung homeostasis but restore airways after injury.

    abstract::Local tissue stem cells have been described in airways of the lung but their contribution to normal epithelial maintenance is currently unknown. We therefore developed aggregation chimera mice and a whole-lung imaging method to determine the relative contributions of progenitor (Clara) and bronchiolar stem cells to ep...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0900668106

    authors: Giangreco A,Arwert EN,Rosewell IR,Snyder J,Watt FM,Stripp BR

    更新日期:2009-06-09 00:00:00

  • A 40-y record reveals gradual Antarctic sea ice increases followed by decreases at rates far exceeding the rates seen in the Arctic.

    abstract::Following over 3 decades of gradual but uneven increases in sea ice coverage, the yearly average Antarctic sea ice extents reached a record high of 12.8 × 106 km2 in 2014, followed by a decline so precipitous that they reached their lowest value in the 40-y 1979-2018 satellite multichannel passive-microwave record, 10...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1906556116

    authors: Parkinson CL

    更新日期:2019-07-16 00:00:00

  • In vitro conversion of estradiol-receptor protein to its nuclear form: dependence on hormone and DNA.

    abstract::Early events in the action of 17-beta-estradiol can be studied in soluble extracts of rat uterus by exposure of the estradiol-receptor protein to a DNA-cellulose matrix. After complexing with [(3)H]estradiol, the 4S receptor protein binds to the DNA, and it can be eluted with buffer of high ionic strength as a more ti...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.69.8.2105

    authors: Yamamoto KR,Alberts BM

    更新日期:1972-08-01 00:00:00

  • Identification of icsA, a plasmid locus of Shigella flexneri that governs bacterial intra- and intercellular spread through interaction with F-actin.

    abstract::The capacity of Shigella to spread within the cytosol of infected epithelial cells and to infect adjacent cells is critical for the development of infection foci, which lead to mucosal abscesses. Shigella is a nonmotile microorganism that appears to utilize host cell microfilaments to generate intra- as well as interc...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.86.10.3867

    authors: Bernardini ML,Mounier J,d'Hauteville H,Coquis-Rondon M,Sansonetti PJ

    更新日期:1989-05-01 00:00:00

  • Determinants of the selective toxicity of alloxan to the pancreatic B cell.

    abstract::The diabetogenic agent alloxan exerts a preferential cytotoxic effect on the pancreatic B cell. The determinants of such a tissue specificity were investigated. Alloxan accumulated rapidly in liver and pancreatic islets but much more slowly in muscle. The activity of glutathione peroxidase and the resistance to exogen...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.79.3.927

    authors: Malaisse WJ,Malaisse-Lagae F,Sener A,Pipeleers DG

    更新日期:1982-02-01 00:00:00

  • DNA polymerases δ and λ cooperate in repairing double-strand breaks by microhomology-mediated end-joining in Saccharomyces cerevisiae.

    abstract::Maintenance of genome stability is carried out by a suite of DNA repair pathways that ensure the repair of damaged DNA and faithful replication of the genome. Of particular importance are the repair pathways, which respond to DNA double-strand breaks (DSBs), and how the efficiency of repair is influenced by sequence h...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1507833112

    authors: Meyer D,Fu BX,Heyer WD

    更新日期:2015-12-15 00:00:00

  • Shuttling of initiating kinase between discrete aggregates of the high affinity receptor for IgE regulates the cellular response.

    abstract::Using defined oligomers of IgE, our group previously studied the quantitative relationship between the aggregation of the high affinity receptors for IgE (Fc epsilonRI) and the earliest signals initiated by such aggregation: the phosphorylation of tyrosines on the receptor. Notably, at certain doses of the oligomers s...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.94.4.1372

    authors: Torigoe C,Goldstein B,Wofsy C,Metzger H

    更新日期:1997-02-18 00:00:00

  • Biological transport processes and space dimension.

    abstract::We discuss the generic time behavior of reaction-diffusion processes capable of modeling various types of biological transport processes, such as ligand migration in proteins and gating fluctuations in ion channel proteins. The main observable in these two cases, the fraction of unbound ligands and the probability of ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.88.15.6750

    authors: Nadler W,Stein DL

    更新日期:1991-08-01 00:00:00

  • Transition state for the NSD2-catalyzed methylation of histone H3 lysine 36.

    abstract::Nuclear receptor SET domain containing protein 2 (NSD2) catalyzes the methylation of histone H3 lysine 36 (H3K36). It is a determinant in Wolf-Hirschhorn syndrome and is overexpressed in human multiple myeloma. Despite the relevance of NSD2 to cancer, there are no potent, selective inhibitors of this enzyme reported. ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1521036113

    authors: Poulin MB,Schneck JL,Matico RE,McDevitt PJ,Huddleston MJ,Hou W,Johnson NW,Thrall SH,Meek TD,Schramm VL

    更新日期:2016-02-02 00:00:00

  • Structural basis of flocculin-mediated social behavior in yeast.

    abstract::In the budding yeast Saccharomyces cerevisiae, self-recognition and the thereby promoted aggregation of thousands of cells into protective flocs is mediated by a family of cell-surface adhesins, the flocculins (Flo). Based on this social behavior FLO genes fulfill the definition of "greenbeard" genes, which direct coo...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1013210108

    authors: Veelders M,Brückner S,Ott D,Unverzagt C,Mösch HU,Essen LO

    更新日期:2010-12-28 00:00:00

  • Pyrolysis of organomercury compounds: investigation by the method of matrix isolation.

    abstract::The method of matrix isolation has been used to investigate mechanisms of gas-phase chemical reactions, in particular the pyrolysis of some organomercury compounds. A molecular beam of pyrolysis products was condensed simultaneously with a large excess of rare gas at temperatures from 5 to 15 degrees K to form a matri...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.68.12.3238

    authors: Maltsev AK,Mikaelian RG,Nefedov OM,Hauge RH,Margrave JL

    更新日期:1971-12-01 00:00:00

  • Antisense RNA to the type I insulin-like growth factor receptor suppresses tumor growth and prevents invasion by rat prostate cancer cells in vivo.

    abstract::Prostate carcinoma is the second leading cause of death from malignancy in men in the United States. Prostate cancer cells express type I insulin-like growth factor receptor (IGF-IR) and prostate cancer selectively metastazises to bone, which is an environment rich in insulin-like growth factors (IGFs), thereby suppor...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.93.14.7263

    authors: Burfeind P,Chernicky CL,Rininsland F,Ilan J,Ilan J

    更新日期:1996-07-09 00:00:00

  • Oxidative inactivation of glutamine synthetase subunits.

    abstract::Escherichia coli glutamine synthetase (GS) was inactivated by a nonenzymic mixed-function oxidation system composed of ascorbate, O2, and Fe(III). Partial inactivation of GS by this system leads to the formation of hybrid GS molecules (dodecamers) composed of both active and inactive subunits. Subunit interactions in ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.81.7.2011

    authors: Nakamura K,Stadtman ER

    更新日期:1984-04-01 00:00:00

  • Rudimentary form of cellular "vision".

    abstract::BHK cells were inoculated sparsely on one face ("sparse- or s-face") of a thin glass film whose opposite face was covered with a 2- to 3-day-old confluent layer of BHK cells ("confluent- or c-face"). After 7 hr of attaching and spreading in the absence of visible light, most of the cells on the s-face traversed with t...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.89.17.8288

    authors: Albrecht-Buehler G

    更新日期:1992-09-01 00:00:00

  • Fate of the replisome following arrest by UV-induced DNA damage in Escherichia coli.

    abstract::Accurate replication in the presence of DNA damage is essential to genome stability and viability in all cells. In Escherichia coli, DNA replication forks blocked by UV-induced damage undergo a partial resection and RecF-catalyzed regression before synthesis resumes. These processing events generate distinct structura...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1300624110

    authors: Jeiranian HA,Schalow BJ,Courcelle CT,Courcelle J

    更新日期:2013-07-09 00:00:00

  • Pathway of ATP utilization and duplex rRNA unwinding by the DEAD-box helicase, DbpA.

    abstract::DEAD-box RNA helicase proteins use the energy of ATP hydrolysis to drive the unwinding of duplex RNA. However, the mechanism that couples ATP utilization to duplex RNA unwinding is unknown. We measured ATP utilization and duplex RNA unwinding by DbpA, a non-processive bacterial DEAD-box RNA helicase specifically activ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0913081107

    authors: Henn A,Cao W,Licciardello N,Heitkamp SE,Hackney DD,De La Cruz EM

    更新日期:2010-03-02 00:00:00

  • Dynamic phase transitions in freestanding polymer thin films.

    abstract::After more than two decades of study, many fundamental questions remain unanswered about the dynamics of glass-forming materials confined to thin films. Experiments and simulations indicate that free interfaces enhance dynamics over length scales larger than molecular sizes, and this effect strengthens at lower temper...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.2006703117

    authors: Ivancic RJS,Riggleman RA

    更新日期:2020-10-13 00:00:00

  • Active cargo positioning in antiparallel transport networks.

    abstract::Cytoskeletal filaments assemble into dense parallel, antiparallel, or disordered networks, providing a complex environment for active cargo transport and positioning by molecular motors. The interplay between the network architecture and intrinsic motor properties clearly affects transport properties but remains poorl...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1900416116

    authors: Richard M,Blanch-Mercader C,Ennomani H,Cao W,De La Cruz EM,Joanny JF,Jülicher F,Blanchoin L,Martin P

    更新日期:2019-07-23 00:00:00

  • The fatal fungal outbreak on Vancouver Island is characterized by enhanced intracellular parasitism driven by mitochondrial regulation.

    abstract::In 1999, the population of Vancouver Island, Canada, began to experience an outbreak of a fatal fungal disease caused by a highly virulent lineage of Cryptococcus gattii. This organism has recently spread to the Canadian mainland and Pacific Northwest, but the molecular cause of the outbreak remains unknown. Here we s...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0902963106

    authors: Ma H,Hagen F,Stekel DJ,Johnston SA,Sionov E,Falk R,Polacheck I,Boekhout T,May RC

    更新日期:2009-08-04 00:00:00

  • Sex difference in the near-24-hour intrinsic period of the human circadian timing system.

    abstract::The circadian rhythms of melatonin and body temperature are set to an earlier hour in women than in men, even when the women and men maintain nearly identical and consistent bedtimes and wake times. Moreover, women tend to wake up earlier than men and exhibit a greater preference for morning activities than men. Altho...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1010666108

    authors: Duffy JF,Cain SW,Chang AM,Phillips AJ,Münch MY,Gronfier C,Wyatt JK,Dijk DJ,Wright KP Jr,Czeisler CA

    更新日期:2011-09-13 00:00:00

  • Nalidixic acid resistance: a second genetic character involved in DNA gyrase activity.

    abstract::ATP-dependent DNA supercoiling catalyzed by Escherichia coli DNA gyrase was inhibited by oxolinic acid, a compound similar to but more potent than nalidixic acid and a known inhibitor of DNA replication in E. coli. The supercoiling activity of DNA gyrase purified from nalidixic acid-resistant mutant (nalA(R)) bacteria...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.74.11.4772

    authors: Gellert M,Mizuuchi K,O'Dea MH,Itoh T,Tomizawa JI

    更新日期:1977-11-01 00:00:00

  • Adenine nucleoside diphosphates block adaptation of mechanoelectrical transduction in hair cells.

    abstract::By adapting to sustained stimuli, hair cells in the internal ear retain their sensitivity to minute transient displacements. Because one model for adaptation asserts that this process is mediated by a myosin isozyme, we reasoned that we should be able to arrest adaptation by interfering with myosin's ATPase cycle thou...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.90.7.2710

    authors: Gillespie PG,Hudspeth AJ

    更新日期:1993-04-01 00:00:00

  • Free energy landscape for the binding process of Huperzine A to acetylcholinesterase.

    abstract::Drug-target residence time (t = 1/k(off), where k(off) is the dissociation rate constant) has become an important index in discovering better- or best-in-class drugs. However, little effort has been dedicated to developing computational methods that can accurately predict this kinetic parameter or related parameters, ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1301814110

    authors: Bai F,Xu Y,Chen J,Liu Q,Gu J,Wang X,Ma J,Li H,Onuchic JN,Jiang H

    更新日期:2013-03-12 00:00:00

  • Identification of a gene that positively regulates expression of listeriolysin, the major virulence factor of listeria monocytogenes.

    abstract::We have isolated, by molecular cloning and genetic complementation of a listeriolysin-negative mutant, a gene required for the expression of this virulence factor in Listeria monocytogenes. The mutant strain SLCC53, which was nonhemolytic and avirulent, harbored a deletion of 450 base pairs located approximately 1500 ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.87.21.8336

    authors: Leimeister-Wächter M,Haffner C,Domann E,Goebel W,Chakraborty T

    更新日期:1990-11-01 00:00:00

  • Compact isospectral sets of plane domains.

    abstract::Any isospectral family of two-dimensional Euclidean domains is shown to be compact in the C(infinity) topology. Previously Melrose, using heat invariants, was able to establish the C(infinity) compactness of the curvature of the boundary curves. The additional ingredient used in this paper to obtain the compactness of...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.85.15.5359

    authors: Osgood B,Phillips R,Sarnak P

    更新日期:1988-08-01 00:00:00

  • Micropatterned mammalian cells exhibit phenotype-specific left-right asymmetry.

    abstract::Left-right (LR) asymmetry (handedness, chirality) is a well-conserved biological property of critical importance to normal development. Changes in orientation of the LR axis due to genetic or environmental factors can lead to malformations and disease. While the LR asymmetry of organs and whole organisms has been exte...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1103834108

    authors: Wan LQ,Ronaldson K,Park M,Taylor G,Zhang Y,Gimble JM,Vunjak-Novakovic G

    更新日期:2011-07-26 00:00:00

  • Identification of an additional negative regulatory region for p53 sequence-specific DNA binding.

    abstract::The DNA binding activity of p53 is crucial for its tumor suppressor function and is subject to tight regulation. Previous studies revealed that the inhibitory function of the p53 C terminus is implicated in the latent, low affinity sequence-specific DNA binding activity of p53 in the uninduced state. Sequence-specific...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.95.11.6079

    authors: Müller-Tiemann BF,Halazonetis TD,Elting JJ

    更新日期:1998-05-26 00:00:00