Oleispira antarctica gen. nov., sp. nov., a novel hydrocarbonoclastic marine bacterium isolated from Antarctic coastal sea water.

Abstract:

:The taxonomic characteristics of two bacterial strains, RB-8(T) and RB-9, isolated from hydrocarbon-degrading enrichment cultures obtained from Antarctic coastal marine environments (Rod Bay, Ross Sea), were determined. These bacteria were psychrophilic, aerobic and Gram-negative with polar flagella. Growth was not observed in the absence of NaCl, occurred only at concentrations of Na+ above 20 mM and was optimal at an NaCl concentration of 3-5% (w/v). The major cellular fatty acids were monounsaturated straight-chain fatty acids. The strains were able to synthesize the polyunsaturated fatty acid eicosapentaenoic acid (20: 5omega3) at low temperatures. The DNA G + C contents were 41-42 mol%. The strains formed a distinct phyletic line within the gamma-Proteobacteria, with less than 89.6% sequence identity to their closest relatives within the Bacteria with validly published names. Both isolates exhibited a restricted substrate profile, with a preference for aliphatic hydrocarbons, that is typical of marine hydrocarbonoclastic micro-organisms such as Alcanivorax, Marinobacter and Oleiphilus. On the basis of ecophysiological properties, G + C content, 16S rRNA gene sequences and fatty acid composition, a novel genus and species within the gamma-Proteobacteria are proposed, Oleispira antarctica gen. nov., sp. nov.; strain RB-8(T) (= DSM 14852(T) = LMG 21398(T)) is the type strain.

authors

Yakimov MM,Giuliano L,Gentile G,Crisafi E,Chernikova TN,Abraham WR,Lünsdorf H,Timmis KN,Golyshin PN

doi

10.1099/ijs.0.02366-0

keywords:

subject

Has Abstract

pub_date

2003-05-01 00:00:00

pages

779-785

issue

Pt 3

eissn

1466-5026

issn

1466-5034

journal_volume

53

pub_type

杂志文章
  • Pseudonocardia dioxanivorans sp. nov., a novel actinomycete that grows on 1,4-dioxane.

    abstract::An actinomycete strain (CB1190(T)) was previously isolated from industrial sludge contaminated with 1,4-dioxane. The cells of this culture are Gram-positive and exhibit branching aerial and vegetative mycelium. Analysis of the 16S rRNA gene sequence indicates that the strain belongs to the genus Pseudonocardia, closel...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63085-0

    authors: Mahendra S,Alvarez-Cohen L

    更新日期:2005-03-01 00:00:00

  • Marinitoga litoralis sp. nov., a thermophilic, heterotrophic bacterium isolated from a coastal thermal spring on Ile Saint-Paul, Southern Indian Ocean.

    abstract::A novel thermophilic, anaerobic and organotrophic bacterium, designated strain MC3T, was isolated from a coastal thermal spring on Ile Saint-Paul in the Southern Indian Ocean. Cells of strain MC3T were motile rods, 0.8-1.0 microm wide and 1.0-2.4 microm long during exponential phase and up to 7.0 microm long during st...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.017574-0

    authors: Postec A,Ciobanu M,Birrien JL,Bienvenu N,Prieur D,Le Romancer M

    更新日期:2010-08-01 00:00:00

  • Gordonia humi sp. nov., isolated from soil.

    abstract::A Gram-stain-positive, non-endospore-forming actinobacterium (CC-12301(T)) was isolated from soil attached to a spawn used in the laboratory to grow the edible mushroom Agaricus brasiliensis. Based on 16S rRNA gene sequence similarities, strain CC-12301(T) was shown to belong to the genus Gordonia and was most closely...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.020545-0

    authors: Kämpfer P,Young CC,Chu JN,Frischmann A,Busse HJ,Arun AB,Shen FT,Rekha PD

    更新日期:2011-01-01 00:00:00

  • Carnobacterium viridans sp. nov., an alkaliphilic, facultative anaerobe isolated from refrigerated, vacuum-packed bologna sausage.

    abstract::A facultatively anaerobic, non-spore-forming, psychrophilic, gram-positive, non-aciduric but alkaliphilic, rod-shaped bacterium (MPL-11T) was found to be responsible for green discoloration of refrigerated vacuum-packaged bologna upon opening of the package. Although Aerococcus viridans, which had been implicated earl...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-5-1881

    authors: Holley RA,Guan TY,Peirson M,Yost CK

    更新日期:2002-09-01 00:00:00

  • Occallatibacter riparius gen. nov., sp. nov. and Occallatibacter savannae sp. nov., acidobacteria isolated from Namibian soils, and emended description of the family Acidobacteriaceae.

    abstract::Three Gram-negative, non-spore-forming, encapsulated bacteria were isolated from a Namibian river-bank soil (strains 277T and 307) and a semiarid savannah soil (strain A2-1cT). 16S rRNA gene sequence analyses placed them within subdivision 1 of the Acidobacteria and revealed 100 % similarity between strains 277T and 3...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000700

    authors: Foesel BU,Mayer S,Luckner M,Wanner G,Rohde M,Overmann J

    更新日期:2016-01-01 00:00:00

  • Saccharopolyspora qijiaojingensis sp. nov., a halophilic actinomycete isolated from a salt lake.

    abstract::A halophilic actinomycete strain, designated YIM 91168T, was isolated from a salt lake in Xinjiang province, north-west China. The isolate grew at 20-40 degrees C, pH 5-8 and 6-22% (w/v) NaCl; there was no growth in the absence of NaCl. The whole-cell hydrolysate contained meso-diaminopimelic acid, galactose and arabi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.009860-0

    authors: Tang SK,Wang Y,Wu JY,Cao LL,Lou K,Xu LH,Jiang CL,Li WJ

    更新日期:2009-09-01 00:00:00

  • Methylothermus subterraneus sp. nov., a moderately thermophilic methanotroph isolated from a terrestrial subsurface hot aquifer.

    abstract::A novel methane-oxidizing bacterium, strain HTM55(T), was isolated from subsurface hot aquifer water from a Japanese gold mine. Strain HTM55(T) was a Gram-negative, aerobic, motile, coccoid bacterium with a single polar flagellum and the distinctive intracytoplasmic membrane arrangement of a type I methanotroph. Strai...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.028092-0

    authors: Hirayama H,Suzuki Y,Abe M,Miyazaki M,Makita H,Inagaki F,Uematsu K,Takai K

    更新日期:2011-11-01 00:00:00

  • Bisgaardia miroungae sp. nov., a new member of the family Pasteurellaceae isolated from the oral cavity of northern elephant seals (Mirounga angustirostris), and emended description of the genus Bisgaardia.

    abstract::A total of 17 bacterial isolates from northern elephant seals, tentatively classified within the family Pasteurellaceae, were further characterized by genotypic and phenotypic tests. Phylogenetic analysis of partial 16S rRNA and rpoB gene sequences showed that the isolates investigated formed a monophyletic group, clo...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.065060-0

    authors: Hansen MJ,Bertelsen MF,Christensen H,Bojesen AM

    更新日期:2015-02-01 00:00:00

  • Hymenobacter xinjiangensis sp. nov., a radiation-resistant bacterium isolated from the desert of Xinjiang, China.

    abstract::A Gram-negative, non-motile, rod-shaped and pink-pigmented bacterium, designated strain X2-1g(T), was isolated from a mixture of sand samples collected from the desert of Xinjiang, China, after exposure of the sand to 8 kGy gamma radiation. Phylogenetic analysis based on 16S rRNA gene sequencing indicated that this is...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65033-0

    authors: Zhang Q,Liu C,Tang Y,Zhou G,Shen P,Fang C,Yokota A

    更新日期:2007-08-01 00:00:00

  • Pseudogulbenkiania subflava gen. nov., sp. nov., isolated from a cold spring.

    abstract::A yellow-coloured bacterial strain, designated BP-5(T), was isolated from a water sample of a cold spring located in the Hsinchu area of northern Taiwan. Cells of the strain were Gram-negative, non-spore-forming rods with a polar flagellum. The isolate was able to grow at 15-42 degrees C, 0-1 % NaCl and pH 6-8. The pr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65755-0

    authors: Lin MC,Chou JH,Arun AB,Young CC,Chen WM

    更新日期:2008-10-01 00:00:00

  • Knoellia locipacati sp. nov., from soil of the Demilitarized Zone in South Korea.

    abstract::A gram-positive, aerobic, rod- or coccus-shaped, non-motile bacterium, designated DMZ1(T), was isolated from soil of the Demilitarized Zone, South Korea. Strain DMZ1(T) grew optimally at 30 °C, at pH 7-8 and with 1 % (w/v) NaCl. The isolate showed high 16S rRNA gene sequence similarity with Knoellia aerolata 5317S-21(...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.031880-0

    authors: Shin NR,Roh SW,Kim MS,Jung MJ,Whon TW,Bae JW

    更新日期:2012-02-01 00:00:00

  • Salinibacillus aidingensis gen. nov., sp. nov. and Salinibacillus kushneri sp. nov., moderately halophilic bacteria isolated from a neutral saline lake in Xin-Jiang, China.

    abstract::Three Gram-positive, moderately halophilic, heterotrophic bacterial strains were isolated from a neutral saline lake in the Xin-Jiang area of China. The strains, designated 8-2(T), W11-1 and 25-7(T), were motile, spore-forming, aerobic rods and contained meso-diaminopimelic acid in their cell walls. Their DNA G+C cont...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63287-0

    authors: Ren PG,Zhou PJ

    更新日期:2005-03-01 00:00:00

  • Proteiniborus indolifex sp. nov., isolated from a thermophilic industrial-scale biogas plant.

    abstract::A novel strictly anaerobic bacterium, designated strain BA2-13T, was isolated from a thermophilic industrial-scale biogas plant. Cells were rod-shaped and Gram-stain-positive. Growth occurred at temperatures of 25 to 50 °C and between pH 6.3 and 9.5. Strain BA2-13T produced indole. Cell growth was stimulated by yeast ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002591

    authors: Hahnke S,Langer T,Klocke M

    更新日期:2018-03-01 00:00:00

  • Pontivivens insulae gen. nov., sp. nov., isolated from seawater.

    abstract::A Gram-stain-negative, aerobic, non-motile and coccoid, ovoid or rod-shaped bacterial strain, designated GYSW-23(T), was isolated from seawater off Geoje island in the South Sea, South Korea. Strain GYSW-23(T) grew optimally at 25 °C, at pH 7.0-8.0 and in the presence of approximately 2.0-3.0% (w/v) NaCl. Phylogenetic...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000352

    authors: Park S,Won SM,Park JM,Jung YT,Yoon JH

    更新日期:2015-09-01 00:00:00

  • Muricauda olearia sp. nov., isolated from crude-oil-contaminated seawater, and emended description of the genus Muricauda.

    abstract::A Gram-staining-negative, rod-shaped and non-motile bacterium, designated CL-SS4T, was isolated from crude-oil-contaminated seawater from the west coast of Korea and was investigated by means of a polyphasic taxonomic approach. Strain CL-SS4T grew optimally at 25-30 degrees C, at pH 6.8-7.7 and in the presence of 2-3%...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.007708-0

    authors: Hwang CY,Kim MH,Bae GD,Zhang GI,Kim YH,Cho BC

    更新日期:2009-08-01 00:00:00

  • Pseudonocardia chloroethenivorans sp. nov., a chloroethene-degrading actinomycete.

    abstract::A bacterial strain, SL-1T, capable of degrading trichloroethene was isolated from a laboratory enrichment in the Department of Civil and Environmental Engineering, University of Washington, USA. The material in the enrichments was derived from a soil sample from Seattle, WA, USA. Strain SL-1T was capable of using phen...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02488-0

    authors: Lee SB,Strand SE,Stensel HD,Herwig RP

    更新日期:2004-01-01 00:00:00

  • Methanocalculus pumilus sp. nov., a heavy-metal-tolerant methanogen isolated from a waste-disposal site.

    abstract::A mesophilic hydrogenotrophic methanogen, strain MHT-1T, was isolated from the leachate of a sea-based site for solid waste disposal (the port of Osaka, Japan). Strain MHT-1T was found to be an irregular coccus and was able to use H2/CO2 and formate as energy sources. Acetate was required for growth. The optimum tempe...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-50-5-1723

    authors: Mori K,Yamamoto H,Kamagata Y,Hatsu M,Takamizawa K

    更新日期:2000-09-01 00:00:00

  • Kuraishia mediterranea sp. nov., a methanol-assimilating yeast species from olive oil and its sediment.

    abstract::Six yeast strains isolated from olive oil sediments and spoiled olive oils originating from Slovenia and Portugal, respectively, proved to represent an undescribed yeast species based on DNA sequence comparisons. The analysis of gene sequences for internal transcribed spacer regions and the large subunit rRNA gene D1/...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002392

    authors: Čadež N,Dlauchy D,Tóbiás A,Péter G

    更新日期:2017-11-01 00:00:00

  • Halofilum ochraceum gen. nov., sp. nov., a gammaproteobacterium isolated from a marine solar saltern.

    abstract::A Gram-stain-negative, oxidase-negative, catalase-positive, facultative anaerobe, designated XJ16T, was isolated from a marine solar saltern on the coast of Weihai, China. Cells of strain XJ16T were long and rod-shaped. The colonies were ochre in colour and were able to reduce nitrate to nitrite. Optimal growth occurr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001718

    authors: Xia J,Zhao JX,Sang J,Chen GJ,Du ZJ

    更新日期:2017-04-01 00:00:00

  • Aeromicrobium camelliae sp. nov., isolated from Pu'er tea.

    abstract::A novel Gram-reaction-positive, aerobic and non-spore-forming rod-shaped bacterial strain, YS17T, was isolated from ripened Pu'er tea. Growth of the strain was observed at 15-50 °C (optimum 30-37 °C) and at pH 5.5-10.5 (optimum 6.0-9.5). Phylogenetic analysis of 16S rRNA gene sequences indicated that the strain repres...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000583

    authors: Niu L,Xiong M,Tang T,Song L,Hu X,Zhao M,Zhang K

    更新日期:2015-12-01 00:00:00

  • Desulfovibrio marinisediminis sp. nov., a novel sulfate-reducing bacterium isolated from coastal marine sediment via enrichment with Casamino acids.

    abstract::To obtain amino acid-utilizing sulfate reducers, enrichment culture was carried out with a medium containing Casamino acids and sulfate and inoculated with coastal marine sediment from the eutrophic Tokyo Bay, Japan. A sulfate reducer, designated strain C/L2(T), was isolated from the sulfide-producing enrichment cultu...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65750-0

    authors: Takii S,Hanada S,Hase Y,Tamaki H,Uyeno Y,Sekiguchi Y,Matsuura K

    更新日期:2008-10-01 00:00:00

  • Algoriphagus faecimaris sp. nov., isolated from coastal sediment.

    abstract::A Gram-negative, non-motile, non-sporulating bacterial strain, designated LYX05(T), was isolated from coastal sediment of Qingdao, China, on the coast of the Yellow Sea. Strain LYX05(T) was aerobic and heterotrophic. The strain grew optimally at 37 °C and pH 7.5 and in the presence of 2% (w/v) NaCl. Colonies were 1-2 ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.027862-0

    authors: Li Y,Yan S,Yang Q,Qi Z,Zhang XH,Fu YB

    更新日期:2011-12-01 00:00:00

  • Mycoplasma iguanae sp. nov., from a green iguana (Iguana iguana) with vertebral disease.

    abstract::Strain 2327T, first cultured from vertebral abscesses of green iguanas (Iguana iguana) collected in Florida, USA, was readily distinguished from all previously described mollicutes by 16S rRNA gene sequence comparisons. Strain 2327T lacks a cell wall, ferments glucose, does not hydrolyse arginine, aesculin or urea and...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63852-0

    authors: Brown DR,Demcovitz DL,Plourdé DR,Potter SM,Hunt ME,Jones RD,Rotstein DS

    更新日期:2006-04-01 00:00:00

  • Actinopolyspora salinaria sp. nov., a halophilic actinomycete isolated from solar saltern soil.

    abstract::The taxonomic position of the halophilic actinobacterial strain, HS05-03T, isolated from solar saltern soil, was determined using a polyphasic approach. Phylogenetic analysis based on the 16S rRNA gene sequence of the strain showed that it formed a distinct evolutionary lineage in the genus Actinopolyspora. The organi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000926

    authors: Duangmal K,Suksaard P,Pathom-Aree W,Mingma R,Matsumoto A,Takahashi Y

    更新日期:2016-04-01 00:00:00

  • Methylobacterium salsuginis sp. nov., isolated from seawater.

    abstract::Three pink-pigmented, facultatively methylotrophic strains, designated MP1, MP2 and MR(T), were isolated from seawater from southern China and characterized. Analysis of their complete 16S rRNA gene sequences revealed that they constituted three separate phylogenetic groups, showing the highest levels of similarity wi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64877-0

    authors: Wang X,Sahr F,Xue T,Sun B

    更新日期:2007-08-01 00:00:00

  • Vibrio hispanicus sp. nov., isolated from Artemia sp. and sea water in Spain.

    abstract::Three Gram-negative, small, motile, rod-shaped bacteria were isolated from Artemia sp. and sea water in Barcelona, Spain, during 1990 and 1991. They were fermentative, oxidase-positive, sensitive to vibriostatic agent O/129, arginine dihydrolase-positive, lysine and ornithine decarboxylase-negative and grew in the abs...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02775-0

    authors: Gomez-Gil B,Thompson FL,Thompson CC,Garcia-Gasca A,Roque A,Swings J

    更新日期:2004-01-01 00:00:00

  • Dyadobacter crusticola sp. nov., from biological soil crusts in the Colorado Plateau, USA, and an emended description of the genus Dyadobacter Chelius and Triplett 2000.

    abstract::Bacterial strain CP183-8(T) was isolated from biological soil crusts collected in the Colorado Plateau, USA. Cells of this strain were aerobic, non-motile, Gram-negative, psychrotolerant and formed beaded chains in the stationary growth phase. They contained C(16 : 1)omega5c and C(16 : 1)omega7c as major fatty acids. ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63498-0

    authors: Reddy GSN,Garcia-Pichel F

    更新日期:2005-05-01 00:00:00

  • Metallosphaera tengchongensis sp. nov., an acidothermophilic archaeon isolated from a hot spring.

    abstract::Two novel acidothermophilic archaea, strains Ric-A(T) and Ric-F, were isolated from muddy water samples of a sulfuric hot spring located in Tengchong County, Yunnan Province, PR China. The strains were aerobic and facultatively chemolithoautotrophic. Both strains could oxidize S(0) and K2S4O6 for autotrophic growth, a...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.070870-0

    authors: Peng TJ,Liu LJ,Liu C,Yang ZF,Liu SJ,Jiang CY

    更新日期:2015-02-01 00:00:00

  • Alloscardovia macacae sp. nov., isolated from the milk of a macaque (Macaca mulatta), emended description of the genus Alloscardovia and proposal of Alloscardovia criceti comb. nov.

    abstract::A novel bacterial strain, designated M8(T), was isolated from milk of a female macaque bred in captivity. The strain was Gram-stain-positive, anaerobic, irregular coccoid-rod-shaped without catalase activity. Analysis of 16S rRNA gene sequence similarity revealed that the isolate was most closely related to Alloscardo...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.051326-0

    authors: Killer J,Ročková Š,Vlková E,Rada V,Havlík J,Kopečný J,Bunešová V,Benada O,Kofroňová O,Pechar R,Profousová I

    更新日期:2013-12-01 00:00:00

  • Lactobacillus silagei sp. nov., isolated from orchardgrass silage.

    abstract::A Gram-reaction-positive, facultatively anaerobic, non-spore-forming and catalase-negative rod-shaped bacterial strain, designated IWT126(T), was isolated from orchardgrass (Dactylis glomerata L.) silage preserved in Hachimantai, Iwate, Japan. The isolate showed growth at 15-45 °C, pH 3.5-7.5 and with 4.0 % (w/v) NaCl...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.053124-0

    authors: Tohno M,Kitahara M,Irisawa T,Masuda T,Uegaki R,Ohkuma M,Tajima K

    更新日期:2013-12-01 00:00:00